RNA–Protein interactions for RNA: ENST00000452483.1

HMGB3P21-201, Transcript of high mobility group box 3 pseudogene 21, humanhuman

BASIC

Gene HMGB3P21, Length 547 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P21-201ENST00000452483 UBAP2LQ14157 1087 aaKnown RBP5.88□□□□□ -1.47
HMGB3P21-201ENST00000452483 COL19A1Q14993 1142 aa5.88□□□□□ -1.47
HMGB3P21-201ENST00000452483 TEAD4Q15561 434 aa5.88□□□□□ -1.47
HMGB3P21-201ENST00000452483 SOGA3Q5TF21 947 aa5.88□□□□□ -1.47
HMGB3P21-201ENST00000452483 ANKMY2Q8IV38 441 aa5.88□□□□□ -1.47
HMGB3P21-201ENST00000452483 GLYCTKQ8IVS8 523 aa5.88□□□□□ -1.47
HMGB3P21-201ENST00000452483 FAM200AQ8TCP9 573 aa5.88□□□□□ -1.47
HMGB3P21-201ENST00000452483 L3MBTL2Q969R5 705 aa5.88□□□□□ -1.47
HMGB3P21-201ENST00000452483 TUT1Q9H6E5 874 aaKnown RBP5.88□□□□□ -1.47
HMGB3P21-201ENST00000452483 G3BP2Q9UN86 482 aaKnown RBP5.88□□□□□ -1.47
HMGB3P21-201ENST00000452483 ZNF232Q9UNY5 417 aa5.88□□□□□ -1.47
HMGB3P21-201ENST00000452483 SERTM1A2A2V5 107 aa5.87□□□□□ -1.47
HMGB3P21-201ENST00000452483 EML1O00423 815 aa5.87□□□□□ -1.47
HMGB3P21-201ENST00000452483 ADAMTS2O95450 1211 aa5.87□□□□□ -1.47
HMGB3P21-201ENST00000452483 S100BP04271 92 aaPredicted RBP5.87□□□□□ -1.47
HMGB3P21-201ENST00000452483 SLURP2P0DP57 97 aa5.87□□□□□ -1.47
HMGB3P21-201ENST00000452483 HSD3B2P26439 372 aa5.87□□□□□ -1.47
HMGB3P21-201ENST00000452483 NOS2P35228 1153 aa5.87□□□□□ -1.47
HMGB3P21-201ENST00000452483 SCNN1AP37088 669 aa5.87□□□□□ -1.47
HMGB3P21-201ENST00000452483 TXLNAP40222 546 aa5.87□□□□□ -1.47
HMGB3P21-201ENST00000452483 SRSF11Q05519 484 aaKnown RBP5.87□□□□□ -1.47
HMGB3P21-201ENST00000452483 PLEKHG6Q3KR16 790 aa5.87□□□□□ -1.47
HMGB3P21-201ENST00000452483 ARSJQ5FYB0 599 aaPredicted RBP5.87□□□□□ -1.47
HMGB3P21-201ENST00000452483 ZFYVE27Q5T4F4 411 aa5.87□□□□□ -1.47
HMGB3P21-201ENST00000452483 SH3PXD2AQ5TCZ1 1133 aa5.87□□□□□ -1.47
HMGB3P21-201ENST00000452483 ZNF746Q6NUN9 644 aaPredicted RBP5.87□□□□□ -1.47
HMGB3P21-201ENST00000452483 FILIP1Q7Z7B0 1213 aa5.87□□□□□ -1.47
HMGB3P21-201ENST00000452483 METTL16Q86W50 562 aaKnown RBP5.87□□□□□ -1.47
HMGB3P21-201ENST00000452483 FAM9BQ8IZU0 186 aa5.87□□□□□ -1.47
HMGB3P21-201ENST00000452483 NME8Q8N427 588 aa5.87□□□□□ -1.47
HMGB3P21-201ENST00000452483 EVI5LQ96CN4 794 aa5.87□□□□□ -1.47
HMGB3P21-201ENST00000452483 OSBPL2Q9H1P3 480 aa5.87□□□□□ -1.47
HMGB3P21-201ENST00000452483 DMGDHQ9UI17 866 aaKnown RBP5.87□□□□□ -1.47
HMGB3P21-201ENST00000452483 DCTN4Q9UJW0 460 aa5.87□□□□□ -1.47
HMGB3P21-201ENST00000452483 PHF24Q9UPV7 400 aa5.87□□□□□ -1.47
HMGB3P21-201ENST00000452483 CHMP3Q9Y3E7 222 aa5.87□□□□□ -1.47
HMGB3P21-201ENST00000452483 PPP1R12BO60237 982 aaPredicted RBP5.86□□□□□ -1.47
HMGB3P21-201ENST00000452483 MX2P20592 715 aa5.86□□□□□ -1.47
HMGB3P21-201ENST00000452483 PAX3P23760 479 aa5.86□□□□□ -1.47
HMGB3P21-201ENST00000452483 ZNF211Q13398 564 aaPredicted RBP5.86□□□□□ -1.47
HMGB3P21-201ENST00000452483 BMS1Q14692 1282 aaKnown RBP5.86□□□□□ -1.47
HMGB3P21-201ENST00000452483 FIGNL1Q6PIW4 674 aa5.86□□□□□ -1.47
HMGB3P21-201ENST00000452483 JAZF1Q86VZ6 243 aa5.86□□□□□ -1.47
HMGB3P21-201ENST00000452483 NLRP8Q86W28 1048 aa5.86□□□□□ -1.47
HMGB3P21-201ENST00000452483 ABHD17AQ96GS6 310 aa5.86□□□□□ -1.47
HMGB3P21-201ENST00000452483 IRF2BPLQ9H1B7 796 aa5.86□□□□□ -1.47
HMGB3P21-201ENST00000452483 PCDH12Q9NPG4 1184 aa5.86□□□□□ -1.47
HMGB3P21-201ENST00000452483 EGFL7Q9UHF1 273 aa5.86□□□□□ -1.47
HMGB3P21-201ENST00000452483 ATXN7L1Q9ULK2 861 aaPredicted RBP5.86□□□□□ -1.47
HMGB3P21-201ENST00000452483 IGF1RP08069 1367 aa5.85□□□□□ -1.47
HMGB3P21-201ENST00000452483 A0A1W2PNR3 127 aa5.85□□□□□ -1.47
HMGB3P21-201ENST00000452483 C21orf2O43822 256 aa5.85□□□□□ -1.47
HMGB3P21-201ENST00000452483 HIRAP54198 1017 aaPredicted RBP5.85□□□□□ -1.47
HMGB3P21-201ENST00000452483 RBL2Q08999 1139 aa5.85□□□□□ -1.47
HMGB3P21-201ENST00000452483 BIRC2Q13490 618 aa5.85□□□□□ -1.47
HMGB3P21-201ENST00000452483 ZNF385CQ66K41 422 aaPredicted RBP5.85□□□□□ -1.47
HMGB3P21-201ENST00000452483 POTEAQ6S8J7 498 aa5.85□□□□□ -1.47
HMGB3P21-201ENST00000452483 BICDL1Q6ZP65 573 aa5.85□□□□□ -1.47
HMGB3P21-201ENST00000452483 TSHZ1Q6ZSZ6 1077 aa5.85□□□□□ -1.47
HMGB3P21-201ENST00000452483 SVOPQ8N4V2 548 aa5.85□□□□□ -1.47
HMGB3P21-201ENST00000452483 RNF34Q969K3 372 aa5.85□□□□□ -1.47
HMGB3P21-201ENST00000452483 HINFPQ9BQA5 517 aa5.85□□□□□ -1.47
HMGB3P21-201ENST00000452483 CFHR5Q9BXR6 569 aa5.85□□□□□ -1.47
HMGB3P21-201ENST00000452483 ACBD3Q9H3P7 528 aa5.85□□□□□ -1.47
HMGB3P21-201ENST00000452483 MRS2Q9HD23 443 aa5.85□□□□□ -1.47
HMGB3P21-201ENST00000452483 ANO2Q9NQ90 1003 aa5.85□□□□□ -1.47
HMGB3P21-201ENST00000452483 NDFIP2Q9NV92 336 aa5.85□□□□□ -1.47
HMGB3P21-201ENST00000452483 IFT57Q9NWB7 429 aa5.85□□□□□ -1.47
HMGB3P21-201ENST00000452483 PNMA2Q9UL42 364 aa5.85□□□□□ -1.47
HMGB3P21-201ENST00000452483 NSFL1CQ9UNZ2 370 aaKnown RBP5.85□□□□□ -1.47
HMGB3P21-201ENST00000452483 GPC6Q9Y625 555 aaPredicted RBP5.85□□□□□ -1.47
HMGB3P21-201ENST00000452483 MRPL42Q9Y6G3 142 aaKnown RBP5.85□□□□□ -1.47
HMGB3P21-201ENST00000452483 BNIP3LO60238 219 aa5.84□□□□□ -1.47
HMGB3P21-201ENST00000452483 FGFR3P22607 806 aa5.84□□□□□ -1.47
HMGB3P21-201ENST00000452483 XPCQ01831 940 aaPredicted RBP5.84□□□□□ -1.47
HMGB3P21-201ENST00000452483 FAM69CQ0P6D2 419 aa5.84□□□□□ -1.47
HMGB3P21-201ENST00000452483 RHPN1Q8TCX5 695 aa5.84□□□□□ -1.47
HMGB3P21-201ENST00000452483 WHAMMQ8TF30 809 aa5.84□□□□□ -1.47
HMGB3P21-201ENST00000452483 SCG3Q8WXD2 468 aaKnown RBP5.84□□□□□ -1.47
HMGB3P21-201ENST00000452483 ZIC5Q96T25 663 aa5.84□□□□□ -1.47
HMGB3P21-201ENST00000452483 PCDHGC4Q9Y5F7 938 aa5.84□□□□□ -1.47
HMGB3P21-201ENST00000452483 GJA3Q9Y6H8 435 aa5.84□□□□□ -1.47
HMGB3P21-201ENST00000452483 DCDC2BA2VCK2 349 aa5.83□□□□□ -1.48
HMGB3P21-201ENST00000452483 ATXN7O15265 892 aaPredicted RBP5.83□□□□□ -1.48
HMGB3P21-201ENST00000452483 ICMTO60725 284 aa5.83□□□□□ -1.48
HMGB3P21-201ENST00000452483 DNAJC6O75061 913 aa5.83□□□□□ -1.48
HMGB3P21-201ENST00000452483 LGR5O75473 907 aa5.83□□□□□ -1.48
HMGB3P21-201ENST00000452483 ITGAEP38570 1179 aa5.83□□□□□ -1.48
HMGB3P21-201ENST00000452483 TNNI2P48788 182 aa5.83□□□□□ -1.48
HMGB3P21-201ENST00000452483 RHBDL3P58872 404 aa5.83□□□□□ -1.48
HMGB3P21-201ENST00000452483 ARID5AQ03989 594 aa5.83□□□□□ -1.48
HMGB3P21-201ENST00000452483 FOXD4Q12950 439 aaPredicted RBP5.83□□□□□ -1.48
HMGB3P21-201ENST00000452483 LDLRAD1Q5T700 205 aa5.83□□□□□ -1.48
HMGB3P21-201ENST00000452483 FMNL3Q8IVF7 1028 aa5.83□□□□□ -1.48
HMGB3P21-201ENST00000452483 CNPY4Q8N129 248 aa5.83□□□□□ -1.48
HMGB3P21-201ENST00000452483 STAG2Q8N3U4 1231 aa5.83□□□□□ -1.48
HMGB3P21-201ENST00000452483 GAS2L2Q8NHY3 880 aa5.83□□□□□ -1.48
HMGB3P21-201ENST00000452483 CHMP7Q8WUX9 453 aaPredicted RBP5.83□□□□□ -1.48
HMGB3P21-201ENST00000452483 MRFAP1L1Q96HT8 127 aa5.83□□□□□ -1.48
HMGB3P21-201ENST00000452483 GMLQ99445 158 aa5.83□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms