RNA–Protein interactions for RNA: ENST00000450717.7

SMARCA4-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 5 BASIC

Gene SMARCA4, Length 5,506 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-205ENST00000450717 C16orf45Q96MC5 204 aaPredicted RBP15.21■□□□□ 0.03
SMARCA4-205ENST00000450717 FBLN1P23142 703 aa15.21■□□□□ 0.03
SMARCA4-205ENST00000450717 PAXBP1Q9Y5B6 917 aa15.21■□□□□ 0.03
SMARCA4-205ENST00000450717 DNMT1P26358 1616 aaKnown RBP15.21■□□□□ 0.03
SMARCA4-205ENST00000450717 KLF18A0A0U1RQI7 1052 aa15.21■□□□□ 0.03
SMARCA4-205ENST00000450717 BIN1O00499 593 aa15.21■□□□□ 0.03
SMARCA4-205ENST00000450717 GSTO1P78417 241 aa15.21■□□□□ 0.03
SMARCA4-205ENST00000450717 DDX46Q7L014 1031 aaKnown RBP15.21■□□□□ 0.03
SMARCA4-205ENST00000450717 RMND1Q9NWS8 449 aa15.21■□□□□ 0.03
SMARCA4-205ENST00000450717 PODXL2Q9NZ53 605 aa15.21■□□□□ 0.03
SMARCA4-205ENST00000450717 TSPY2A6NKD2 308 aa15.21■□□□□ 0.03
SMARCA4-205ENST00000450717 MTIF2P46199 727 aaKnown RBP15.21■□□□□ 0.03
SMARCA4-205ENST00000450717 CEP85Q6P2H3 762 aa15.21■□□□□ 0.03
SMARCA4-205ENST00000450717 CRNKL1Q9BZJ0 848 aaKnown RBP15.21■□□□□ 0.03
SMARCA4-205ENST00000450717 ZBTB40Q9NUA8 1239 aa15.21■□□□□ 0.03
SMARCA4-205ENST00000450717 CCDC171Q6TFL3 1326 aa15.21■□□□□ 0.02
SMARCA4-205ENST00000450717 ANXA1P04083 346 aa15.21■□□□□ 0.02
SMARCA4-205ENST00000450717 SNW1Q13573 536 aaKnown RBP15.21■□□□□ 0.02
SMARCA4-205ENST00000450717 SMC5Q8IY18 1101 aa15.21■□□□□ 0.02
SMARCA4-205ENST00000450717 TRMT1Q9NXH9 659 aaKnown RBP15.21■□□□□ 0.02
SMARCA4-205ENST00000450717 NPC1L1Q9UHC9 1359 aa15.2■□□□□ 0.02
SMARCA4-205ENST00000450717 ALS2CR12Q96Q35 445 aa15.2■□□□□ 0.02
SMARCA4-205ENST00000450717 WTAPQ15007 396 aa15.2■□□□□ 0.02
SMARCA4-205ENST00000450717 F13A1P00488 732 aa15.2■□□□□ 0.02
SMARCA4-205ENST00000450717 PPP4R3AQ6IN85 833 aa15.2■□□□□ 0.02
SMARCA4-205ENST00000450717 COPS6Q7L5N1 327 aa15.2■□□□□ 0.02
SMARCA4-205ENST00000450717 SHTN1A0MZ66 631 aa15.2■□□□□ 0.02
SMARCA4-205ENST00000450717 SYKP43405 635 aa15.2■□□□□ 0.02
SMARCA4-205ENST00000450717 MTHFSDQ2M296 383 aaKnown RBP15.2■□□□□ 0.02
SMARCA4-205ENST00000450717 USP48Q86UV5 1035 aa15.2■□□□□ 0.02
SMARCA4-205ENST00000450717 CCDC144CPQ8IYA2 1237 aa15.2■□□□□ 0.02
SMARCA4-205ENST00000450717 NECAB1Q8N987 351 aa15.2■□□□□ 0.02
SMARCA4-205ENST00000450717 MAP3K5Q99683 1374 aa15.2■□□□□ 0.02
SMARCA4-205ENST00000450717 ZBTB43O43298 467 aa15.19■□□□□ 0.02
SMARCA4-205ENST00000450717 ZCRB1Q8TBF4 217 aaKnown RBP15.19■□□□□ 0.02
SMARCA4-205ENST00000450717 CPLX3Q8WVH0 158 aa15.19■□□□□ 0.02
SMARCA4-205ENST00000450717 UBA7P41226 1012 aa15.19■□□□□ 0.02
SMARCA4-205ENST00000450717 LUZP1Q86V48 1076 aa15.19■□□□□ 0.02
SMARCA4-205ENST00000450717 LINS1Q8NG48 757 aa15.19■□□□□ 0.02
SMARCA4-205ENST00000450717 CNPY2Q9Y2B0 182 aa15.19■□□□□ 0.02
SMARCA4-205ENST00000450717 HCLS1P14317 486 aaPredicted RBP15.19■□□□□ 0.02
SMARCA4-205ENST00000450717 UBA5Q9GZZ9 404 aa15.19■□□□□ 0.02
SMARCA4-205ENST00000450717 ATP2B3Q16720 1220 aa15.19■□□□□ 0.02
SMARCA4-205ENST00000450717 GIMAP6Q6P9H5 292 aa15.19■□□□□ 0.02
SMARCA4-205ENST00000450717 SSR1P43307 286 aaKnown RBP15.18■□□□□ 0.02
SMARCA4-205ENST00000450717 FAM200AQ8TCP9 573 aa15.18■□□□□ 0.02
SMARCA4-205ENST00000450717 KIF21AQ7Z4S6 1674 aa15.18■□□□□ 0.02
SMARCA4-205ENST00000450717 DYNC1I1O14576 645 aa15.18■□□□□ 0.02
SMARCA4-205ENST00000450717 TDRD12Q587J7 1177 aaKnown RBP15.18■□□□□ 0.02
SMARCA4-205ENST00000450717 MRPS27Q92552 414 aaKnown RBP15.18■□□□□ 0.02
SMARCA4-205ENST00000450717 RAD50Q92878 1312 aa15.18■□□□□ 0.02
SMARCA4-205ENST00000450717 TRPM2O94759 1503 aa15.18■□□□□ 0.02
SMARCA4-205ENST00000450717 RAB3GAP1Q15042 981 aa15.18■□□□□ 0.02
SMARCA4-205ENST00000450717 NAA15Q9BXJ9 866 aaKnown RBP15.18■□□□□ 0.02
SMARCA4-205ENST00000450717 A0A1W2PP64 1363 aa15.18■□□□□ 0.02
SMARCA4-205ENST00000450717 NBPF7P0C2Y1 421 aaPredicted RBP15.18■□□□□ 0.02
SMARCA4-205ENST00000450717 CEP135Q66GS9 1140 aa15.18■□□□□ 0.02
SMARCA4-205ENST00000450717 STXBP4Q6ZWJ1 553 aa15.18■□□□□ 0.02
SMARCA4-205ENST00000450717 EHBP1Q8NDI1 1231 aa15.18■□□□□ 0.02
SMARCA4-205ENST00000450717 CTAGE1Q96RT6 745 aa15.18■□□□□ 0.02
SMARCA4-205ENST00000450717 ALG1Q9BT22 464 aa15.18■□□□□ 0.02
SMARCA4-205ENST00000450717 ADAMTS2O95450 1211 aa15.17■□□□□ 0.02
SMARCA4-205ENST00000450717 CETN1Q12798 172 aa15.17■□□□□ 0.02
SMARCA4-205ENST00000450717 Q6ZUG5 572 aa15.17■□□□□ 0.02
SMARCA4-205ENST00000450717 ESR2Q92731 530 aa15.17■□□□□ 0.02
SMARCA4-205ENST00000450717 INTS4Q96HW7 963 aaKnown RBP15.17■□□□□ 0.02
SMARCA4-205ENST00000450717 RLBP1P12271 317 aa15.17■□□□□ 0.02
SMARCA4-205ENST00000450717 CARD14Q9BXL6 1004 aa15.17■□□□□ 0.02
SMARCA4-205ENST00000450717 NEBLO76041 1014 aa15.17■□□□□ 0.02
SMARCA4-205ENST00000450717 NMIQ13287 307 aaPredicted RBP15.17■□□□□ 0.02
SMARCA4-205ENST00000450717 CCDC40Q4G0X9 1142 aa15.17■□□□□ 0.02
SMARCA4-205ENST00000450717 MSH6P52701 1360 aa15.17■□□□□ 0.02
SMARCA4-205ENST00000450717 NPHP3Q7Z494 1330 aa15.17■□□□□ 0.02
SMARCA4-205ENST00000450717 PZPP20742 1482 aa15.17■□□□□ 0.02
SMARCA4-205ENST00000450717 LMBR1LQ6UX01 489 aa15.17■□□□□ 0.02
SMARCA4-205ENST00000450717 C16orf71Q8IYS4 520 aaPredicted RBP15.17■□□□□ 0.02
SMARCA4-205ENST00000450717 ZGPATQ8N5A5 531 aaKnown RBP15.17■□□□□ 0.02
SMARCA4-205ENST00000450717 HLA-DOAP06340 250 aa15.16■□□□□ 0.02
SMARCA4-205ENST00000450717 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP15.16■□□□□ 0.021e-8■■■□□ 18.5
SMARCA4-205ENST00000450717 ERICH4A6NGS2 130 aa15.16■□□□□ 0.02
SMARCA4-205ENST00000450717 INSRP06213 1382 aa15.16■□□□□ 0.02
SMARCA4-205ENST00000450717 RTN1Q16799 776 aa15.16■□□□□ 0.02
SMARCA4-205ENST00000450717 PLEKHM2Q8IWE5 1019 aa15.16■□□□□ 0.02
SMARCA4-205ENST00000450717 PER1O15534 1290 aaPredicted RBP15.16■□□□□ 0.02
SMARCA4-205ENST00000450717 ANO6Q4KMQ2 910 aa15.16■□□□□ 0.02
SMARCA4-205ENST00000450717 PPP4R3BQ5MIZ7 849 aa15.16■□□□□ 0.02
SMARCA4-205ENST00000450717 JARID2Q92833 1246 aaPredicted RBP15.16■□□□□ 0.02
SMARCA4-205ENST00000450717 PAG1Q9NWQ8 432 aa15.16■□□□□ 0.02
SMARCA4-205ENST00000450717 CHRNA2Q15822 529 aa15.15■□□□□ 0.02
SMARCA4-205ENST00000450717 MAST1Q9Y2H9 1570 aa15.15■□□□□ 0.02
SMARCA4-205ENST00000450717 ZMYM4Q5VZL5 1548 aa15.15■□□□□ 0.02
SMARCA4-205ENST00000450717 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP15.15■□□□□ 0.02
SMARCA4-205ENST00000450717 C6orf229H3BNL8 230 aa15.15■□□□□ 0.02
SMARCA4-205ENST00000450717 TUBB4AP04350 444 aa15.15■□□□□ 0.02
SMARCA4-205ENST00000450717 GNAQP50148 359 aa15.15■□□□□ 0.02
SMARCA4-205ENST00000450717 CBX1P83916 185 aa15.15■□□□□ 0.02
SMARCA4-205ENST00000450717 SPAG1Q07617 926 aa15.15■□□□□ 0.02
SMARCA4-205ENST00000450717 TSPYL6Q8N831 410 aa15.15■□□□□ 0.02
SMARCA4-205ENST00000450717 ADGRL2O95490 1459 aa15.15■□□□□ 0.02
SMARCA4-205ENST00000450717 CCDC91Q7Z6B0 441 aa15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms