RNA–Protein interactions for RNA: ENST00000449833.6

SHANK2-211, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 5 BASIC

Gene SHANK2, Length 8,850 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-211ENST00000449833 STXBP4Q6ZWJ1 553 aa13.2□□□□□ -0.3
SHANK2-211ENST00000449833 MRFAP1L1Q96HT8 127 aa13.2□□□□□ -0.3
SHANK2-211ENST00000449833 LRP2BPQ9P2M1 347 aa13.2□□□□□ -0.3
SHANK2-211ENST00000449833 CROCCP2Q86T23 111 aa13.19□□□□□ -0.3
SHANK2-211ENST00000449833 TTC36A6NLP5 189 aa13.19□□□□□ -0.3
SHANK2-211ENST00000449833 ATP2A1O14983 1001 aa13.19□□□□□ -0.3
SHANK2-211ENST00000449833 PRKAR2BP31323 418 aa13.19□□□□□ -0.3
SHANK2-211ENST00000449833 DMTNQ08495 405 aa13.19□□□□□ -0.3
SHANK2-211ENST00000449833 TEX2Q8IWB9 1127 aa13.19□□□□□ -0.3
SHANK2-211ENST00000449833 CPLX3Q8WVH0 158 aa13.19□□□□□ -0.3
SHANK2-211ENST00000449833 HMGB3O15347 200 aaKnown RBP13.19□□□□□ -0.3
SHANK2-211ENST00000449833 FSIP1Q8NA03 581 aa13.19□□□□□ -0.3
SHANK2-211ENST00000449833 ZNF428Q96B54 188 aa13.19□□□□□ -0.3
SHANK2-211ENST00000449833 DHX29Q7Z478 1369 aaKnown RBP13.19□□□□□ -0.3
SHANK2-211ENST00000449833 PPFIA1Q13136 1202 aa13.19□□□□□ -0.3
SHANK2-211ENST00000449833 HVCN1Q96D96 273 aa13.19□□□□□ -0.3
SHANK2-211ENST00000449833 CALML4Q96GE6 196 aa13.19□□□□□ -0.3
SHANK2-211ENST00000449833 BCAR3O75815 825 aa13.19□□□□□ -0.3
SHANK2-211ENST00000449833 CEP85LQ5SZL2 805 aa13.19□□□□□ -0.3
SHANK2-211ENST00000449833 ARMC9Q7Z3E5 817 aa13.19□□□□□ -0.3
SHANK2-211ENST00000449833 SMARCC2Q8TAQ2 1214 aa13.19□□□□□ -0.3
SHANK2-211ENST00000449833 GPRASP1Q5JY77 1395 aa13.18□□□□□ -0.3
SHANK2-211ENST00000449833 MRPS9P82933 396 aaKnown RBP13.18□□□□□ -0.3
SHANK2-211ENST00000449833 TNPO1Q92973 898 aaKnown RBP13.18□□□□□ -0.3
SHANK2-211ENST00000449833 ODF2LQ9ULJ1 636 aa13.18□□□□□ -0.3
SHANK2-211ENST00000449833 KLHL40Q2TBA0 621 aa13.18□□□□□ -0.3
SHANK2-211ENST00000449833 PPP1R9BQ96SB3 815 aa13.18□□□□□ -0.3
SHANK2-211ENST00000449833 EHMT1Q9H9B1 1298 aa13.18□□□□□ -0.3
SHANK2-211ENST00000449833 FAM177BA6PVY3 158 aa13.18□□□□□ -0.3
SHANK2-211ENST00000449833 ZNF165P49910 485 aa13.18□□□□□ -0.3
SHANK2-211ENST00000449833 SSRP1Q08945 709 aaKnown RBP13.18□□□□□ -0.3
SHANK2-211ENST00000449833 RABEP2Q9H5N1 569 aa13.18□□□□□ -0.3
SHANK2-211ENST00000449833 FAF1Q9UNN5 650 aaPredicted RBP13.18□□□□□ -0.3
SHANK2-211ENST00000449833 SMIM24O75264 130 aa13.18□□□□□ -0.3
SHANK2-211ENST00000449833 CYLC1P35663 651 aaPredicted RBP13.18□□□□□ -0.3
SHANK2-211ENST00000449833 HDAC1Q13547 482 aaPredicted RBP13.18□□□□□ -0.3
SHANK2-211ENST00000449833 TBC1D31Q96DN5 1066 aa13.18□□□□□ -0.3
SHANK2-211ENST00000449833 GFAPP14136 432 aa13.17□□□□□ -0.3
SHANK2-211ENST00000449833 VAV2P52735 878 aa13.17□□□□□ -0.3
SHANK2-211ENST00000449833 GGNBP2Q9H3C7 697 aa13.17□□□□□ -0.3
SHANK2-211ENST00000449833 PPP2R1AP30153 589 aa13.17□□□□□ -0.3
SHANK2-211ENST00000449833 CCDC170Q8IYT3 715 aa13.17□□□□□ -0.3
SHANK2-211ENST00000449833 SMC1BQ8NDV3 1235 aa13.17□□□□□ -0.3
SHANK2-211ENST00000449833 ZSWIM4Q9H7M6 989 aa13.17□□□□□ -0.3
SHANK2-211ENST00000449833 BICDL2A1A5D9 508 aa13.17□□□□□ -0.3
SHANK2-211ENST00000449833 NKTRP30414 1462 aaKnown RBP13.17□□□□□ -0.3
SHANK2-211ENST00000449833 FERMT3Q86UX7 667 aa13.17□□□□□ -0.3
SHANK2-211ENST00000449833 NDUFAB1O14561 156 aa13.17□□□□□ -0.3
SHANK2-211ENST00000449833 RMND1Q9NWS8 449 aa13.17□□□□□ -0.3
SHANK2-211ENST00000449833 SF3B2Q13435 895 aaKnown RBP13.16□□□□□ -0.3
SHANK2-211ENST00000449833 ZSCAN29Q8IWY8 852 aaPredicted RBP13.16□□□□□ -0.3
SHANK2-211ENST00000449833 PDCD2Q16342 344 aaPredicted RBP13.16□□□□□ -0.3
SHANK2-211ENST00000449833 FYB2Q5VWT5 728 aa13.16□□□□□ -0.3
SHANK2-211ENST00000449833 CCDC62Q6P9F0 684 aa13.16□□□□□ -0.3
SHANK2-211ENST00000449833 ABTB2Q8N961 1025 aa13.16□□□□□ -0.3
SHANK2-211ENST00000449833 BICD1Q96G01 975 aa13.16□□□□□ -0.3
SHANK2-211ENST00000449833 TCP11L1Q9NUJ3 509 aa13.16□□□□□ -0.3
SHANK2-211ENST00000449833 SLC12A7Q9Y666 1083 aa13.16□□□□□ -0.3
SHANK2-211ENST00000449833 ZEB2O60315 1214 aa13.16□□□□□ -0.3
SHANK2-211ENST00000449833 GLRX3O76003 335 aaKnown RBP13.16□□□□□ -0.3
SHANK2-211ENST00000449833 UBASH3AP57075 661 aa13.16□□□□□ -0.3
SHANK2-211ENST00000449833 KLHDC4Q8TBB5 520 aa13.16□□□□□ -0.3
SHANK2-211ENST00000449833 ZFXP17010 805 aaPredicted RBP13.16□□□□□ -0.3
SHANK2-211ENST00000449833 NUCB1Q02818 461 aa13.16□□□□□ -0.3
SHANK2-211ENST00000449833 CUL5Q93034 780 aa13.16□□□□□ -0.3
SHANK2-211ENST00000449833 ARL1P40616 181 aaPredicted RBP13.16□□□□□ -0.3
SHANK2-211ENST00000449833 MUM1Q2TAK8 710 aa13.16□□□□□ -0.3
SHANK2-211ENST00000449833 ZSCAN23Q3MJ62 389 aa13.16□□□□□ -0.3
SHANK2-211ENST00000449833 CCDC152Q4G0S7 254 aa13.16□□□□□ -0.3
SHANK2-211ENST00000449833 CCDC68Q9H2F9 335 aa13.16□□□□□ -0.3
SHANK2-211ENST00000449833 CCDC63Q8NA47 563 aa13.16□□□□□ -0.3
SHANK2-211ENST00000449833 PHLDB3Q6NSJ2 640 aa13.15□□□□□ -0.3
SHANK2-211ENST00000449833 TSR2Q969E8 191 aaKnown RBP13.15□□□□□ -0.3
SHANK2-211ENST00000449833 KIF1BPQ96EK5 621 aa13.15□□□□□ -0.3
SHANK2-211ENST00000449833 LRRC27Q9C0I9 530 aa13.15□□□□□ -0.3
SHANK2-211ENST00000449833 CABP2Q9NPB3 220 aa13.15□□□□□ -0.3
SHANK2-211ENST00000449833 AKAP2Q9Y2D5 859 aa13.15□□□□□ -0.3
SHANK2-211ENST00000449833 RPGRIP1LQ68CZ1 1315 aa13.15□□□□□ -0.3
SHANK2-211ENST00000449833 MYO1BO43795 1136 aa13.15□□□□□ -0.3
SHANK2-211ENST00000449833 PCYT1AP49585 367 aa13.15□□□□□ -0.3
SHANK2-211ENST00000449833 CEP126Q9P2H0 1117 aa13.15□□□□□ -0.3
SHANK2-211ENST00000449833 RAB11FIP4Q86YS3 637 aa13.15□□□□□ -0.3
SHANK2-211ENST00000449833 TSGA10Q9BZW7 698 aa13.15□□□□□ -0.3
SHANK2-211ENST00000449833 TPX2Q9ULW0 747 aaKnown RBP13.15□□□□□ -0.3
SHANK2-211ENST00000449833 ANKRD24Q8TF21 1146 aa13.15□□□□□ -0.3
SHANK2-211ENST00000449833 DTNBP1Q96EV8 351 aa13.15□□□□□ -0.3
SHANK2-211ENST00000449833 SELENOSQ9BQE4 189 aa13.15□□□□□ -0.3
SHANK2-211ENST00000449833 STRN4Q9NRL3 753 aa13.15□□□□□ -0.3
SHANK2-211ENST00000449833 AK9Q5TCS8 1911 aa13.15□□□□□ -0.3
SHANK2-211ENST00000449833 BAG4O95429 457 aaKnown RBP13.15□□□□□ -0.3
SHANK2-211ENST00000449833 ATP2A3Q93084 1043 aa13.15□□□□□ -0.3
SHANK2-211ENST00000449833 SH3GL3Q99963 347 aa13.15□□□□□ -0.3
SHANK2-211ENST00000449833 MYL6BP14649 208 aa13.15□□□□□ -0.31
SHANK2-211ENST00000449833 LRSAM1Q6UWE0 723 aa13.14□□□□□ -0.31
SHANK2-211ENST00000449833 ERO1AQ96HE7 468 aa13.14□□□□□ -0.31
SHANK2-211ENST00000449833 GOLGA5Q8TBA6 731 aa13.14□□□□□ -0.31
SHANK2-211ENST00000449833 DCAF8L1A6NGE4 600 aa13.14□□□□□ -0.31
SHANK2-211ENST00000449833 ATP2A2P16615 1042 aaKnown RBP13.14□□□□□ -0.31
SHANK2-211ENST00000449833 TCERG1LQ5VWI1 586 aa13.14□□□□□ -0.31
SHANK2-211ENST00000449833 EPSTI1Q96J88 318 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms