RNA–Protein interactions for RNA: ENST00000449413.1

HLA-DRB9-201, Transcript of major histocompatibility complex, class II, DR beta 9 (pseudogene), humanhuman

BASIC

Gene HLA-DRB9, Length 343 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB9-201ENST00000449413 NIP7Q9Y221 180 aaKnown RBP eCLIP15.82■□□□□ 0.12
HLA-DRB9-201ENST00000449413 A0A1B0GUL6 1792 aa15.82■□□□□ 0.12
HLA-DRB9-201ENST00000449413 SRGAP3O43295 1099 aa15.81■□□□□ 0.12
HLA-DRB9-201ENST00000449413 NTSR2O95665 410 aa15.81■□□□□ 0.12
HLA-DRB9-201ENST00000449413 RABL6Q3YEC7 729 aaPredicted RBP15.81■□□□□ 0.12
HLA-DRB9-201ENST00000449413 RTL5Q5HYW3 569 aaPredicted RBP15.81■□□□□ 0.12
HLA-DRB9-201ENST00000449413 EPHA10Q5JZY3 1008 aa15.81■□□□□ 0.12
HLA-DRB9-201ENST00000449413 CARMIL3Q8ND23 1372 aa15.8■□□□□ 0.12
HLA-DRB9-201ENST00000449413 FSTL1Q12841 308 aa15.8■□□□□ 0.12
HLA-DRB9-201ENST00000449413 PLA2G12BQ9BX93 195 aa15.8■□□□□ 0.12
HLA-DRB9-201ENST00000449413 DCTPP1Q9H773 170 aa15.8■□□□□ 0.12
HLA-DRB9-201ENST00000449413 NMRK2Q9NPI5 230 aa15.8■□□□□ 0.12
HLA-DRB9-201ENST00000449413 TRMT112Q9UI30 125 aaKnown RBP15.8■□□□□ 0.12
HLA-DRB9-201ENST00000449413 PDZRN3Q9UPQ7 1066 aa15.8■□□□□ 0.12
HLA-DRB9-201ENST00000449413 WDR90Q96KV7 1748 aa15.8■□□□□ 0.12
HLA-DRB9-201ENST00000449413 FOXO4P98177 505 aa15.79■□□□□ 0.12
HLA-DRB9-201ENST00000449413 SUSD4Q5VX71 490 aa15.79■□□□□ 0.12
HLA-DRB9-201ENST00000449413 TBC1D9BQ66K14 1250 aa15.79■□□□□ 0.12
HLA-DRB9-201ENST00000449413 FAM89AQ96GI7 184 aa15.79■□□□□ 0.12
HLA-DRB9-201ENST00000449413 UTP14AQ9BVJ6 771 aaKnown RBP15.79■□□□□ 0.12
HLA-DRB9-201ENST00000449413 SH3TC1Q8TE82 1336 aa15.78■□□□□ 0.12
HLA-DRB9-201ENST00000449413 NUCB1Q02818 461 aa15.78■□□□□ 0.12
HLA-DRB9-201ENST00000449413 C16orf71Q8IYS4 520 aaPredicted RBP15.78■□□□□ 0.12
HLA-DRB9-201ENST00000449413 RIC1Q4ADV7 1423 aa15.77■□□□□ 0.12
HLA-DRB9-201ENST00000449413 ABCC12Q96J65 1359 aa15.77■□□□□ 0.12
HLA-DRB9-201ENST00000449413 IRS4O14654 1257 aaPredicted RBP15.77■□□□□ 0.12
HLA-DRB9-201ENST00000449413 HTRA3P83110 453 aa15.77■□□□□ 0.12
HLA-DRB9-201ENST00000449413 SKAP1Q86WV1 359 aa15.77■□□□□ 0.12
HLA-DRB9-201ENST00000449413 EXOC6BQ9Y2D4 811 aa15.77■□□□□ 0.12
HLA-DRB9-201ENST00000449413 ANKRD31Q8N7Z5 1873 aa15.77■□□□□ 0.11
HLA-DRB9-201ENST00000449413 ARAP2Q8WZ64 1704 aa15.77■□□□□ 0.11
HLA-DRB9-201ENST00000449413 FAM177BA6PVY3 158 aa15.76■□□□□ 0.11
HLA-DRB9-201ENST00000449413 GYS1P13807 737 aa15.76■□□□□ 0.11
HLA-DRB9-201ENST00000449413 CTSWP56202 376 aa15.76■□□□□ 0.11
HLA-DRB9-201ENST00000449413 TGFB2P61812 414 aa15.76■□□□□ 0.11
HLA-DRB9-201ENST00000449413 LMBR1LQ6UX01 489 aa15.76■□□□□ 0.11
HLA-DRB9-201ENST00000449413 BICDL1Q6ZP65 573 aa15.76■□□□□ 0.11
HLA-DRB9-201ENST00000449413 CHD1LQ86WJ1 897 aa15.76■□□□□ 0.11
HLA-DRB9-201ENST00000449413 SYNE4Q8N205 404 aa15.75■□□□□ 0.11
HLA-DRB9-201ENST00000449413 SETDB2Q96T68 719 aa15.75■□□□□ 0.11
HLA-DRB9-201ENST00000449413 NYXQ9GZU5 481 aa15.75■□□□□ 0.11
HLA-DRB9-201ENST00000449413 BCS1LQ9Y276 419 aa15.75■□□□□ 0.11
HLA-DRB9-201ENST00000449413 CHMP3Q9Y3E7 222 aa15.75■□□□□ 0.11
HLA-DRB9-201ENST00000449413 COL11A2P13942 1736 aaPredicted RBP15.74■□□□□ 0.11
HLA-DRB9-201ENST00000449413 COL4A1P02462 1669 aa15.74■□□□□ 0.11
HLA-DRB9-201ENST00000449413 PDE8AO60658 829 aa15.74■□□□□ 0.11
HLA-DRB9-201ENST00000449413 HSP90B1P14625 803 aaKnown RBP15.74■□□□□ 0.11
HLA-DRB9-201ENST00000449413 RFX5P48382 616 aaPredicted RBP15.74■□□□□ 0.11
HLA-DRB9-201ENST00000449413 RGS3P49796 1198 aa15.74■□□□□ 0.11
HLA-DRB9-201ENST00000449413 NFIXQ14938 502 aa15.74■□□□□ 0.11
HLA-DRB9-201ENST00000449413 FAM161AQ3B820 660 aa15.74■□□□□ 0.11
HLA-DRB9-201ENST00000449413 HSP90AB4PQ58FF6 505 aa15.74■□□□□ 0.11
HLA-DRB9-201ENST00000449413 ANKRD45Q5TZF3 282 aa15.74■□□□□ 0.11
HLA-DRB9-201ENST00000449413 NUTM1Q86Y26 1132 aa15.74■□□□□ 0.11
HLA-DRB9-201ENST00000449413 LNPKQ9C0E8 428 aa15.74■□□□□ 0.11
HLA-DRB9-201ENST00000449413 PA2G4Q9UQ80 394 aaKnown RBP15.74■□□□□ 0.11
HLA-DRB9-201ENST00000449413 NOP58Q9Y2X3 529 aaKnown RBP15.74■□□□□ 0.11
HLA-DRB9-201ENST00000449413 RTL9Q8NET4 1388 aa15.74■□□□□ 0.11
HLA-DRB9-201ENST00000449413 APBB1O00213 710 aa15.73■□□□□ 0.11
HLA-DRB9-201ENST00000449413 SURF6O75683 361 aaKnown RBP15.73■□□□□ 0.11
HLA-DRB9-201ENST00000449413 PDE4AP27815 886 aa15.73■□□□□ 0.11
HLA-DRB9-201ENST00000449413 ARHGAP27Q6ZUM4 889 aa15.73■□□□□ 0.11
HLA-DRB9-201ENST00000449413 NBPF5PQ86XG9 351 aaPredicted RBP15.73■□□□□ 0.11
HLA-DRB9-201ENST00000449413 LRRCC1Q9C099 1032 aa15.73■□□□□ 0.11
HLA-DRB9-201ENST00000449413 COPRSQ9NQ92 184 aa15.73■□□□□ 0.11
HLA-DRB9-201ENST00000449413 ZBTB47Q9UFB7 747 aaPredicted RBP15.73■□□□□ 0.11
HLA-DRB9-201ENST00000449413 C10orf71Q711Q0 1435 aa15.72■□□□□ 0.11
HLA-DRB9-201ENST00000449413 RAB11FIP3O75154 756 aa15.72■□□□□ 0.11
HLA-DRB9-201ENST00000449413 CSF1RP07333 972 aa15.72■□□□□ 0.11
HLA-DRB9-201ENST00000449413 MMP10P09238 476 aa15.72■□□□□ 0.11
HLA-DRB9-201ENST00000449413 PTPN12Q05209 780 aaKnown RBP15.72■□□□□ 0.11
HLA-DRB9-201ENST00000449413 OS9Q13438 667 aaPredicted RBP15.72■□□□□ 0.11
HLA-DRB9-201ENST00000449413 ERFEQ4G0M1 354 aa15.72■□□□□ 0.11
HLA-DRB9-201ENST00000449413 AK9Q5TCS8 1911 aa15.72■□□□□ 0.11
HLA-DRB9-201ENST00000449413 TAF1P21675 1872 aa15.71■□□□□ 0.11
HLA-DRB9-201ENST00000449413 HCLS1P14317 486 aaPredicted RBP15.71■□□□□ 0.11
HLA-DRB9-201ENST00000449413 C9orf131Q5VYM1 1079 aa15.71■□□□□ 0.11
HLA-DRB9-201ENST00000449413 ERC1Q8IUD2 1116 aa15.71■□□□□ 0.11
HLA-DRB9-201ENST00000449413 TTLL11Q8NHH1 800 aa15.71■□□□□ 0.11
HLA-DRB9-201ENST00000449413 KLHDC4Q8TBB5 520 aa15.71■□□□□ 0.11
HLA-DRB9-201ENST00000449413 KIF1BPQ96EK5 621 aa15.71■□□□□ 0.11
HLA-DRB9-201ENST00000449413 A0A0G2JLW4 131 aa15.7■□□□□ 0.1
HLA-DRB9-201ENST00000449413 SMARCA5O60264 1052 aaPredicted RBP15.7■□□□□ 0.1
HLA-DRB9-201ENST00000449413 CNBD1Q8NA66 436 aa15.7■□□□□ 0.1
HLA-DRB9-201ENST00000449413 SIL1Q9H173 461 aa15.7■□□□□ 0.1
HLA-DRB9-201ENST00000449413 GREM2Q9H772 168 aa15.7■□□□□ 0.1
HLA-DRB9-201ENST00000449413 LRRC37AA6NMS7 1700 aa15.7■□□□□ 0.1
HLA-DRB9-201ENST00000449413 CACNA1SQ13698 1873 aa15.69■□□□□ 0.1
HLA-DRB9-201ENST00000449413 ZNF609O15014 1411 aa15.69■□□□□ 0.1
HLA-DRB9-201ENST00000449413 GTF2E1P29083 439 aaPredicted RBP15.69■□□□□ 0.1
HLA-DRB9-201ENST00000449413 DDR1Q08345 913 aa15.69■□□□□ 0.1
HLA-DRB9-201ENST00000449413 IFIT5Q13325 482 aaKnown RBP15.69■□□□□ 0.1
HLA-DRB9-201ENST00000449413 CCDC57Q2TAC2 916 aa15.69■□□□□ 0.1
HLA-DRB9-201ENST00000449413 RHPN1Q8TCX5 695 aa15.69■□□□□ 0.1
HLA-DRB9-201ENST00000449413 CCDC85AQ96PX6 553 aaPredicted RBP15.69■□□□□ 0.1
HLA-DRB9-201ENST00000449413 DLEC1Q9Y238 1755 aa15.69■□□□□ 0.1
HLA-DRB9-201ENST00000449413 POLRMTO00411 1230 aaKnown RBP15.68■□□□□ 0.1
HLA-DRB9-201ENST00000449413 NPHP1O15259 732 aa15.68■□□□□ 0.1
HLA-DRB9-201ENST00000449413 ITGA6P23229 1130 aa15.68■□□□□ 0.1
HLA-DRB9-201ENST00000449413 TM4SF1P30408 202 aa15.68■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms