RNA–Protein interactions for RNA: ENST00000449062.1

RTFDC1-204, Transcript of Protein RTF2 homolog, humanhuman

TSL 5

Gene RTFDC1, Length 852 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-204ENST00000449062 E9PSI1 815 aa18.02■□□□□ 0.48
RTFDC1-204ENST00000449062 DDNO94850 711 aaPredicted RBP18.02■□□□□ 0.48
RTFDC1-204ENST00000449062 VEGFAP15692 232 aaPredicted RBP18.02■□□□□ 0.48
RTFDC1-204ENST00000449062 CWF19L2Q2TBE0 894 aaKnown RBP18.02■□□□□ 0.48
RTFDC1-204ENST00000449062 MIER1Q8N108 512 aa18.02■□□□□ 0.48
RTFDC1-204ENST00000449062 CDCA7LQ96GN5 454 aa18.02■□□□□ 0.48
RTFDC1-204ENST00000449062 CDHR2Q9BYE9 1310 aa18.01■□□□□ 0.47
RTFDC1-204ENST00000449062 DIEXFQ68CQ4 756 aaKnown RBP18.01■□□□□ 0.47
RTFDC1-204ENST00000449062 RBM46Q8TBY0 533 aaKnown RBP18.01■□□□□ 0.47
RTFDC1-204ENST00000449062 DNAAF4Q8WXU2 420 aa18.01■□□□□ 0.47
RTFDC1-204ENST00000449062 LAMB2P55268 1798 aa18■□□□□ 0.47
RTFDC1-204ENST00000449062 PDE8AO60658 829 aa18■□□□□ 0.47
RTFDC1-204ENST00000449062 CASP7P55210 303 aa18■□□□□ 0.47
RTFDC1-204ENST00000449062 RPS8P62241 208 aaKnown RBP18■□□□□ 0.47
RTFDC1-204ENST00000449062 NEXNQ0ZGT2 675 aa18■□□□□ 0.47
RTFDC1-204ENST00000449062 FKBP5Q13451 457 aaPredicted RBP18■□□□□ 0.47
RTFDC1-204ENST00000449062 GCKRQ14397 625 aa18■□□□□ 0.47
RTFDC1-204ENST00000449062 TMC4Q7Z404 712 aa18■□□□□ 0.47
RTFDC1-204ENST00000449062 LINS1Q8NG48 757 aa18■□□□□ 0.47
RTFDC1-204ENST00000449062 VPS33BQ9H267 617 aa18■□□□□ 0.47
RTFDC1-204ENST00000449062 SEC31BQ9NQW1 1179 aa18■□□□□ 0.47
RTFDC1-204ENST00000449062 DDX60Q8IY21 1712 aaKnown RBP18■□□□□ 0.47
RTFDC1-204ENST00000449062 COL4A5P29400 1685 aa17.99■□□□□ 0.47
RTFDC1-204ENST00000449062 HSP90B1P14625 803 aaKnown RBP17.99■□□□□ 0.47
RTFDC1-204ENST00000449062 MPNDQ8N594 471 aa17.99■□□□□ 0.47
RTFDC1-204ENST00000449062 L3MBTL3Q96JM7 780 aaPredicted RBP17.99■□□□□ 0.47
RTFDC1-204ENST00000449062 COL4A1P02462 1669 aa17.99■□□□□ 0.47
RTFDC1-204ENST00000449062 ZNF541Q9H0D2 1346 aa17.98■□□□□ 0.47
RTFDC1-204ENST00000449062 F6X3S4 739 aa17.98■□□□□ 0.47
RTFDC1-204ENST00000449062 BEND3Q5T5X7 828 aa17.98■□□□□ 0.47
RTFDC1-204ENST00000449062 TTLL11Q8NHH1 800 aa17.98■□□□□ 0.47
RTFDC1-204ENST00000449062 CACNA1FO60840 1977 aa17.98■□□□□ 0.47
RTFDC1-204ENST00000449062 TAF1P21675 1872 aa17.97■□□□□ 0.47
RTFDC1-204ENST00000449062 HSPA6P17066 643 aa17.97■□□□□ 0.47
RTFDC1-204ENST00000449062 MRPL50Q8N5N7 158 aaKnown RBP17.97■□□□□ 0.47
RTFDC1-204ENST00000449062 PLA2G12BQ9BX93 195 aa17.97■□□□□ 0.47
RTFDC1-204ENST00000449062 CCDC152Q4G0S7 254 aa17.96■□□□□ 0.47
RTFDC1-204ENST00000449062 DPP8Q6V1X1 898 aaPredicted RBP17.96■□□□□ 0.47
RTFDC1-204ENST00000449062 LARGE2Q8N3Y3 721 aa17.96■□□□□ 0.47
RTFDC1-204ENST00000449062 JDP2Q8WYK2 163 aa17.96■□□□□ 0.47
RTFDC1-204ENST00000449062 TMX4Q9H1E5 349 aaPredicted RBP17.96■□□□□ 0.47
RTFDC1-204ENST00000449062 TIAM2Q8IVF5 1701 aa17.95■□□□□ 0.46
RTFDC1-204ENST00000449062 WDR90Q96KV7 1748 aa17.95■□□□□ 0.46
RTFDC1-204ENST00000449062 CSF1RP07333 972 aa17.95■□□□□ 0.46
RTFDC1-204ENST00000449062 KIAA2012Q0VF49 1180 aa17.95■□□□□ 0.46
RTFDC1-204ENST00000449062 FSTL1Q12841 308 aa17.95■□□□□ 0.46
RTFDC1-204ENST00000449062 UBE3BQ7Z3V4 1068 aa17.95■□□□□ 0.46
RTFDC1-204ENST00000449062 SUPT20HQ8NEM7 779 aa17.95■□□□□ 0.46
RTFDC1-204ENST00000449062 POLLQ9UGP5 575 aa17.95■□□□□ 0.46
RTFDC1-204ENST00000449062 CTSWP56202 376 aa17.94■□□□□ 0.46
RTFDC1-204ENST00000449062 GPSM2P81274 684 aa17.94■□□□□ 0.46
RTFDC1-204ENST00000449062 AOC3Q16853 763 aa17.94■□□□□ 0.46
RTFDC1-204ENST00000449062 GPC2Q8N158 579 aa17.94■□□□□ 0.46
RTFDC1-204ENST00000449062 SSH1Q8WYL5 1049 aa17.94■□□□□ 0.46
RTFDC1-204ENST00000449062 PPIP5K2O43314 1243 aa17.93■□□□□ 0.46
RTFDC1-204ENST00000449062 C16orf71Q8IYS4 520 aaPredicted RBP17.93■□□□□ 0.46
RTFDC1-204ENST00000449062 CCDC85AQ96PX6 553 aaPredicted RBP17.93■□□□□ 0.46
RTFDC1-204ENST00000449062 PODXL2Q9NZ53 605 aa17.93■□□□□ 0.46
RTFDC1-204ENST00000449062 NSFL1CQ9UNZ2 370 aaKnown RBP17.93■□□□□ 0.46
RTFDC1-204ENST00000449062 RTL9Q8NET4 1388 aa17.92■□□□□ 0.46
RTFDC1-204ENST00000449062 TAF1DQ9H5J8 278 aaPredicted RBP17.92■□□□□ 0.46
RTFDC1-204ENST00000449062 GREM2Q9H772 168 aa17.92■□□□□ 0.46
RTFDC1-204ENST00000449062 ZNRF3Q9ULT6 936 aa17.92■□□□□ 0.46
RTFDC1-204ENST00000449062 DUOX1Q9NRD9 1551 aa17.91■□□□□ 0.46
RTFDC1-204ENST00000449062 POTEIP0CG38 1075 aa17.91■□□□□ 0.46
RTFDC1-204ENST00000449062 POTEJP0CG39 1038 aa17.91■□□□□ 0.46
RTFDC1-204ENST00000449062 EIF6P56537 245 aaKnown RBP17.91■□□□□ 0.46
RTFDC1-204ENST00000449062 FOXO4P98177 505 aa17.91■□□□□ 0.46
RTFDC1-204ENST00000449062 CXCL9Q07325 125 aa17.91■□□□□ 0.46
RTFDC1-204ENST00000449062 SMC1BQ8NDV3 1235 aa17.91■□□□□ 0.46
RTFDC1-204ENST00000449062 TBC1D16Q8TBP0 767 aa17.91■□□□□ 0.46
RTFDC1-204ENST00000449062 ALDH1L1O75891 902 aa17.9■□□□□ 0.46
RTFDC1-204ENST00000449062 ALDH1L2Q3SY69 923 aa17.9■□□□□ 0.46
RTFDC1-204ENST00000449062 NIM1KQ8IY84 436 aa17.9■□□□□ 0.46
RTFDC1-204ENST00000449062 BSDC1Q9NW68 430 aaPredicted RBP17.9■□□□□ 0.46
RTFDC1-204ENST00000449062 LRRC37AA6NMS7 1700 aa17.89■□□□□ 0.46
RTFDC1-204ENST00000449062 IQCA1LA6NCM1 817 aa17.89■□□□□ 0.45
RTFDC1-204ENST00000449062 YDJCA8MPS7 323 aa17.89■□□□□ 0.45
RTFDC1-204ENST00000449062 ANKRD18AQ8IVF6 992 aa17.89■□□□□ 0.45
RTFDC1-204ENST00000449062 WTIPA6NIX2 430 aaPredicted RBP17.88■□□□□ 0.45
RTFDC1-204ENST00000449062 CT47B1P0C2W7 299 aaPredicted RBP17.88■□□□□ 0.45
RTFDC1-204ENST00000449062 SCNN1DP51172 638 aa17.88■□□□□ 0.45
RTFDC1-204ENST00000449062 BRPF1P55201 1214 aaPredicted RBP17.88■□□□□ 0.45
RTFDC1-204ENST00000449062 WASHC4Q2M389 1173 aa17.88■□□□□ 0.45
RTFDC1-204ENST00000449062 EPHA10Q5JZY3 1008 aa17.88■□□□□ 0.45
RTFDC1-204ENST00000449062 DNAJC5GQ8N7S2 189 aa17.88■□□□□ 0.45
RTFDC1-204ENST00000449062 HACL1Q9UJ83 578 aa17.88■□□□□ 0.45
RTFDC1-204ENST00000449062 MINPP1Q9UNW1 487 aa17.88■□□□□ 0.45
RTFDC1-204ENST00000449062 C6orf229H3BNL8 230 aa17.87■□□□□ 0.45
RTFDC1-204ENST00000449062 GRM8O00222 908 aa17.87■□□□□ 0.45
RTFDC1-204ENST00000449062 KAZALD1Q96I82 304 aa17.87■□□□□ 0.45
RTFDC1-204ENST00000449062 CDC5LQ99459 802 aaKnown RBP17.87■□□□□ 0.45
RTFDC1-204ENST00000449062 SRCIN1Q9C0H9 1055 aa17.87■□□□□ 0.45
RTFDC1-204ENST00000449062 GJA3Q9Y6H8 435 aa17.87■□□□□ 0.45
RTFDC1-204ENST00000449062 UTYO14607 1347 aa17.87■□□□□ 0.45
RTFDC1-204ENST00000449062 PTPRCP08575 1304 aa17.87■□□□□ 0.45
RTFDC1-204ENST00000449062 ITGA6P23229 1130 aa17.86■□□□□ 0.45
RTFDC1-204ENST00000449062 EPHX2P34913 555 aa17.86■□□□□ 0.45
RTFDC1-204ENST00000449062 EPS15P42566 896 aa17.86■□□□□ 0.45
RTFDC1-204ENST00000449062 APLP1P51693 650 aa17.86■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms