RNA–Protein interactions for RNA: ENST00000448472.5

CHRD-205, Transcript of chordin, humanhuman

TSL 1 (best)

Gene CHRD, Length 3,547 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRD-205ENST00000448472 PODXL2Q9NZ53 605 aa18.61■□□□□ 0.57
CHRD-205ENST00000448472 SMC2O95347 1197 aa18.61■□□□□ 0.57
CHRD-205ENST00000448472 CCDC144BQ3MJ40 725 aa18.61■□□□□ 0.57
CHRD-205ENST00000448472 CCDC144CPQ8IYA2 1237 aa18.61■□□□□ 0.57
CHRD-205ENST00000448472 CGNQ9P2M7 1197 aaKnown RBP18.61■□□□□ 0.57
CHRD-205ENST00000448472 GRM8O00222 908 aa18.6■□□□□ 0.57
CHRD-205ENST00000448472 DDX46Q7L014 1031 aaKnown RBP18.6■□□□□ 0.57
CHRD-205ENST00000448472 CEP170BQ9Y4F5 1589 aaPredicted RBP18.6■□□□□ 0.57
CHRD-205ENST00000448472 RIMS1Q86UR5 1692 aaKnown RBP18.6■□□□□ 0.57
CHRD-205ENST00000448472 CHGBP05060 677 aa18.6■□□□□ 0.57
CHRD-205ENST00000448472 SIRT1Q96EB6 747 aa18.6■□□□□ 0.57
CHRD-205ENST00000448472 PGBD1Q96JS3 809 aa18.6■□□□□ 0.57
CHRD-205ENST00000448472 SEC62Q99442 399 aaKnown RBP18.6■□□□□ 0.57
CHRD-205ENST00000448472 KSR2Q6VAB6 950 aa18.6■□□□□ 0.57
CHRD-205ENST00000448472 CHST3Q7LGC8 479 aa18.6■□□□□ 0.57
CHRD-205ENST00000448472 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP18.6■□□□□ 0.57
CHRD-205ENST00000448472 SETD1BQ9UPS6 1966 aaKnown RBP18.59■□□□□ 0.57
CHRD-205ENST00000448472 SASH1O94885 1247 aa18.59■□□□□ 0.57
CHRD-205ENST00000448472 PSME1Q06323 249 aa18.59■□□□□ 0.57
CHRD-205ENST00000448472 PLEKHO1Q53GL0 409 aaPredicted RBP18.59■□□□□ 0.57
CHRD-205ENST00000448472 ERICH4A6NGS2 130 aa18.58■□□□□ 0.57
CHRD-205ENST00000448472 BIN1O00499 593 aa18.58■□□□□ 0.57
CHRD-205ENST00000448472 HOMER1Q86YM7 354 aa18.58■□□□□ 0.57
CHRD-205ENST00000448472 TNRQ92752 1358 aa18.58■□□□□ 0.57
CHRD-205ENST00000448472 PAXBP1Q9Y5B6 917 aa18.58■□□□□ 0.57
CHRD-205ENST00000448472 CCDC69A6NI79 296 aa18.58■□□□□ 0.56
CHRD-205ENST00000448472 TOB2Q14106 344 aaPredicted RBP18.58■□□□□ 0.56
CHRD-205ENST00000448472 ISM2Q6H9L7 571 aa18.58■□□□□ 0.56
CHRD-205ENST00000448472 C11orf57Q6ZUT1 292 aaPredicted RBP18.58■□□□□ 0.56
CHRD-205ENST00000448472 SLC39A6Q13433 755 aa18.57■□□□□ 0.56
CHRD-205ENST00000448472 UTP14CQ5TAP6 766 aaKnown RBP18.57■□□□□ 0.56
CHRD-205ENST00000448472 AOPEPQ8N6M6 819 aa18.57■□□□□ 0.56
CHRD-205ENST00000448472 FSIP1Q8NA03 581 aa18.57■□□□□ 0.56
CHRD-205ENST00000448472 USP27XA6NNY8 438 aa18.57■□□□□ 0.56
CHRD-205ENST00000448472 MYD88Q99836 296 aa18.57■□□□□ 0.56
CHRD-205ENST00000448472 KDRP35968 1356 aa18.57■□□□□ 0.56
CHRD-205ENST00000448472 NCOA5Q9HCD5 579 aaKnown RBP18.57■□□□□ 0.56
CHRD-205ENST00000448472 ZNF215Q9UL58 517 aaPredicted RBP18.57■□□□□ 0.56
CHRD-205ENST00000448472 RAB11FIP4Q86YS3 637 aa18.56■□□□□ 0.56
CHRD-205ENST00000448472 OGFRQ9NZT2 677 aa18.56■□□□□ 0.56
CHRD-205ENST00000448472 USP31Q70CQ4 1352 aa18.56■□□□□ 0.56
CHRD-205ENST00000448472 ELP1O95163 1332 aa18.56■□□□□ 0.56
CHRD-205ENST00000448472 APOBRQ0VD83 1088 aa18.56■□□□□ 0.56
CHRD-205ENST00000448472 KRT32Q14532 448 aa18.56■□□□□ 0.56
CHRD-205ENST00000448472 STX1AQ16623 288 aa18.56■□□□□ 0.56
CHRD-205ENST00000448472 NRDCO43847 1150 aa18.55■□□□□ 0.56
CHRD-205ENST00000448472 CEP57L1Q8IYX8 460 aa18.55■□□□□ 0.56
CHRD-205ENST00000448472 IL17RAQ96F46 866 aa18.55■□□□□ 0.56
CHRD-205ENST00000448472 FEZ1Q99689 392 aa18.55■□□□□ 0.56
CHRD-205ENST00000448472 TMEM2Q9UHN6 1383 aa18.55■□□□□ 0.56
CHRD-205ENST00000448472 ALDH1L1O75891 902 aa18.55■□□□□ 0.56
CHRD-205ENST00000448472 TDRD7Q8NHU6 1098 aaKnown RBP18.55■□□□□ 0.56
CHRD-205ENST00000448472 LRRC8AQ8IWT6 810 aa18.54■□□□□ 0.56
CHRD-205ENST00000448472 LINS1Q8NG48 757 aa18.54■□□□□ 0.56
CHRD-205ENST00000448472 ANKRD7Q92527 254 aa18.54■□□□□ 0.56
CHRD-205ENST00000448472 PDIA4P13667 645 aaKnown RBP18.54■□□□□ 0.56
CHRD-205ENST00000448472 ELF2Q15723 593 aa18.54■□□□□ 0.56
CHRD-205ENST00000448472 KIF18AQ8NI77 898 aa18.54■□□□□ 0.56
CHRD-205ENST00000448472 POLR3DP05423 398 aaPredicted RBP18.54■□□□□ 0.56
CHRD-205ENST00000448472 ESCO1Q5FWF5 840 aa18.54■□□□□ 0.56
CHRD-205ENST00000448472 ADCY9O60503 1353 aa18.53■□□□□ 0.56
CHRD-205ENST00000448472 ATP5J2-PTCD1G3V325 749 aa18.53■□□□□ 0.56
CHRD-205ENST00000448472 PTCD1O75127 700 aaKnown RBP18.53■□□□□ 0.56
CHRD-205ENST00000448472 SLFNL1Q499Z3 407 aa18.53■□□□□ 0.56
CHRD-205ENST00000448472 PLA2G4DQ86XP0 818 aa18.53■□□□□ 0.56
CHRD-205ENST00000448472 FAM177A1Q8N128 213 aaPredicted RBP18.53■□□□□ 0.56
CHRD-205ENST00000448472 GTF3C6Q969F1 213 aa18.53■□□□□ 0.56
CHRD-205ENST00000448472 HMG20BQ9P0W2 317 aa18.53■□□□□ 0.56
CHRD-205ENST00000448472 KIF20AO95235 890 aa18.53■□□□□ 0.56
CHRD-205ENST00000448472 ANO10Q9NW15 660 aa18.53■□□□□ 0.56
CHRD-205ENST00000448472 STK38Q15208 465 aa18.53■□□□□ 0.56
CHRD-205ENST00000448472 OTUD7BQ6GQQ9 843 aa18.53■□□□□ 0.56
CHRD-205ENST00000448472 BABAM1Q9NWV8 329 aa18.53■□□□□ 0.56
CHRD-205ENST00000448472 A0A1B0GVL5 298 aa18.52■□□□□ 0.56
CHRD-205ENST00000448472 TAF5LO75529 589 aa18.52■□□□□ 0.56
CHRD-205ENST00000448472 ARHGAP30Q7Z6I6 1101 aaPredicted RBP18.52■□□□□ 0.56
CHRD-205ENST00000448472 CTIFO43310 598 aaKnown RBP18.52■□□□□ 0.56
CHRD-205ENST00000448472 TFCP2Q12800 502 aa18.52■□□□□ 0.56
CHRD-205ENST00000448472 UBE3BQ7Z3V4 1068 aa18.52■□□□□ 0.56
CHRD-205ENST00000448472 TMC6Q7Z403 805 aa18.52■□□□□ 0.56
CHRD-205ENST00000448472 USP28Q96RU2 1077 aa18.52■□□□□ 0.56
CHRD-205ENST00000448472 NAT10Q9H0A0 1025 aaKnown RBP18.52■□□□□ 0.56
CHRD-205ENST00000448472 ZSCAN16Q9H4T2 348 aaPredicted RBP18.52■□□□□ 0.56
CHRD-205ENST00000448472 PTPDC1A2A3K4 754 aa18.52■□□□□ 0.55
CHRD-205ENST00000448472 ZNF396Q96N95 335 aaPredicted RBP18.52■□□□□ 0.55
CHRD-205ENST00000448472 GOLIM4O00461 696 aa18.51■□□□□ 0.55
CHRD-205ENST00000448472 SCRN1Q12765 414 aa18.51■□□□□ 0.55
CHRD-205ENST00000448472 ITSN1Q15811 1721 aa18.51■□□□□ 0.55
CHRD-205ENST00000448472 GIGYF1O75420 1035 aaPredicted RBP18.5■□□□□ 0.55
CHRD-205ENST00000448472 COPS6Q7L5N1 327 aa18.5■□□□□ 0.55
CHRD-205ENST00000448472 DBNDD2Q9BQY9 259 aa18.5■□□□□ 0.55
CHRD-205ENST00000448472 RESTQ13127 1097 aa18.5■□□□□ 0.55
CHRD-205ENST00000448472 AKAP4Q5JQC9 854 aa18.5■□□□□ 0.55
CHRD-205ENST00000448472 XAGE3Q8WTP9 111 aa18.5■□□□□ 0.55
CHRD-205ENST00000448472 CTNNA3Q9UI47 895 aa18.5■□□□□ 0.55
CHRD-205ENST00000448472 CYP21A2P08686 494 aa18.5■□□□□ 0.55
CHRD-205ENST00000448472 GNL2Q13823 731 aaKnown RBP18.5■□□□□ 0.55
CHRD-205ENST00000448472 ZNF330Q9Y3S2 320 aaPredicted RBP18.5■□□□□ 0.55
CHRD-205ENST00000448472 U3KPZ7 1027 aaPredicted RBP18.5■□□□□ 0.55
CHRD-205ENST00000448472 KCNA6P17658 529 aa18.49■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms