RNA–Protein interactions for RNA: ENST00000447734.5

PMS1-216, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 5

Gene PMS1, Length 570 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-216ENST00000447734 CCDC181Q5TID7 509 aa5.35□□□□□ -1.55
PMS1-216ENST00000447734 VASH1Q7L8A9 365 aaPredicted RBP5.35□□□□□ -1.55
PMS1-216ENST00000447734 FILIP1Q7Z7B0 1213 aa5.35□□□□□ -1.55
PMS1-216ENST00000447734 C12orf49Q9H741 205 aa5.35□□□□□ -1.55
PMS1-216ENST00000447734 NEUROD4Q9HD90 331 aa5.35□□□□□ -1.55
PMS1-216ENST00000447734 COL4A3BPQ9Y5P4 624 aa5.35□□□□□ -1.55
PMS1-216ENST00000447734 USP31Q70CQ4 1352 aa5.34□□□□□ -1.55
PMS1-216ENST00000447734 ENPP3O14638 875 aa5.34□□□□□ -1.55
PMS1-216ENST00000447734 CPNE3O75131 537 aaKnown RBP5.34□□□□□ -1.55
PMS1-216ENST00000447734 ARHGEF15O94989 841 aa5.34□□□□□ -1.55
PMS1-216ENST00000447734 BMP2P12643 396 aa5.34□□□□□ -1.55
PMS1-216ENST00000447734 MTFR1Q15390 333 aa5.34□□□□□ -1.55
PMS1-216ENST00000447734 TAF1CQ15572 869 aaPredicted RBP5.34□□□□□ -1.55
PMS1-216ENST00000447734 C8orf34Q49A92 452 aa5.34□□□□□ -1.55
PMS1-216ENST00000447734 ESCO1Q5FWF5 840 aa5.34□□□□□ -1.55
PMS1-216ENST00000447734 ETFBKMTQ8IXQ9 262 aa5.34□□□□□ -1.55
PMS1-216ENST00000447734 GIPC1O14908 333 aa5.33□□□□□ -1.56
PMS1-216ENST00000447734 SMTNP53814 917 aa5.33□□□□□ -1.56
PMS1-216ENST00000447734 NR5A1Q13285 461 aa5.33□□□□□ -1.56
PMS1-216ENST00000447734 SERINC3Q13530 473 aa5.33□□□□□ -1.56
PMS1-216ENST00000447734 DGKZQ13574 1117 aa5.33□□□□□ -1.56
PMS1-216ENST00000447734 C11orf91Q3C1V1 193 aa5.33□□□□□ -1.56
PMS1-216ENST00000447734 LARP7Q4G0J3 582 aaKnown RBP eCLIP5.33□□□□□ -1.56
PMS1-216ENST00000447734 MEI1Q5TIA1 1274 aa5.33□□□□□ -1.56
PMS1-216ENST00000447734 CYP2U1Q7Z449 544 aa5.33□□□□□ -1.56
PMS1-216ENST00000447734 NANOS1Q8WY41 292 aaKnown RBP5.33□□□□□ -1.56
PMS1-216ENST00000447734 MKL1Q969V6 931 aa5.33□□□□□ -1.56
PMS1-216ENST00000447734 SRPK1Q96SB4 655 aaKnown RBP5.33□□□□□ -1.56
PMS1-216ENST00000447734 COL25A1Q9BXS0 654 aaPredicted RBP5.33□□□□□ -1.56
PMS1-216ENST00000447734 IFT57Q9NWB7 429 aa5.33□□□□□ -1.56
PMS1-216ENST00000447734 SUGT1Q9Y2Z0 365 aa5.33□□□□□ -1.56
PMS1-216ENST00000447734 MAP4K5Q9Y4K4 846 aa5.33□□□□□ -1.56
PMS1-216ENST00000447734 DNAJC6O75061 913 aa5.32□□□□□ -1.56
PMS1-216ENST00000447734 GNRH1P01148 92 aa5.32□□□□□ -1.56
PMS1-216ENST00000447734 SLURP2P0DP57 97 aa5.32□□□□□ -1.56
PMS1-216ENST00000447734 ST13P50502 369 aaKnown RBP5.32□□□□□ -1.56
PMS1-216ENST00000447734 PTSQ03393 145 aa5.32□□□□□ -1.56
PMS1-216ENST00000447734 RTN1Q16799 776 aa5.32□□□□□ -1.56
PMS1-216ENST00000447734 XP32Q5T750 250 aa5.32□□□□□ -1.56
PMS1-216ENST00000447734 GPAT2Q6NUI2 795 aa5.32□□□□□ -1.56
PMS1-216ENST00000447734 NBPF15Q8N660 670 aa5.32□□□□□ -1.56
PMS1-216ENST00000447734 RASGRP4Q8TDF6 673 aa5.32□□□□□ -1.56
PMS1-216ENST00000447734 GPR152Q8TDT2 470 aa5.32□□□□□ -1.56
PMS1-216ENST00000447734 NUDT16Q96DE0 195 aaKnown RBP5.32□□□□□ -1.56
PMS1-216ENST00000447734 IFT43Q96FT9 208 aa5.32□□□□□ -1.56
PMS1-216ENST00000447734 PSMD1Q99460 953 aa5.32□□□□□ -1.56
PMS1-216ENST00000447734 SPC25Q9HBM1 224 aa5.32□□□□□ -1.56
PMS1-216ENST00000447734 PCDH12Q9NPG4 1184 aa5.32□□□□□ -1.56
PMS1-216ENST00000447734 TMPRSS4Q9NRS4 437 aa5.32□□□□□ -1.56
PMS1-216ENST00000447734 FAM8A1Q9UBU6 413 aa5.32□□□□□ -1.56
PMS1-216ENST00000447734 SERTM1A2A2V5 107 aa5.31□□□□□ -1.56
PMS1-216ENST00000447734 PLEKHD1A6NEE1 506 aa5.31□□□□□ -1.56
PMS1-216ENST00000447734 FIGNL2A6NMB9 653 aa5.31□□□□□ -1.56
PMS1-216ENST00000447734 RNF225M0QZC1 329 aaPredicted RBP5.31□□□□□ -1.56
PMS1-216ENST00000447734 PPP1R12AO14974 1030 aaPredicted RBP5.31□□□□□ -1.56
PMS1-216ENST00000447734 U2SURPO15042 1029 aaKnown RBP5.31□□□□□ -1.56
PMS1-216ENST00000447734 RPLP1P05386 114 aaKnown RBP5.31□□□□□ -1.56
PMS1-216ENST00000447734 USP17L7P0C7H9 530 aa5.31□□□□□ -1.56
PMS1-216ENST00000447734 DHX9Q08211 1270 aaKnown RBP5.31□□□□□ -1.56
PMS1-216ENST00000447734 TLR1Q15399 786 aa5.31□□□□□ -1.56
PMS1-216ENST00000447734 HSP90AB2PQ58FF8 381 aa5.31□□□□□ -1.56
PMS1-216ENST00000447734 PI16Q6UXB8 463 aa5.31□□□□□ -1.56
PMS1-216ENST00000447734 ERMP1Q7Z2K6 904 aa5.31□□□□□ -1.56
PMS1-216ENST00000447734 ALDH16A1Q8IZ83 802 aa5.31□□□□□ -1.56
PMS1-216ENST00000447734 SEC16BQ96JE7 1060 aa5.31□□□□□ -1.56
PMS1-216ENST00000447734 TRIM55Q9BYV6 548 aa5.31□□□□□ -1.56
PMS1-216ENST00000447734 OSBPL7Q9BZF2 842 aa5.31□□□□□ -1.56
PMS1-216ENST00000447734 SLKQ9H2G2 1235 aaPredicted RBP5.31□□□□□ -1.56
PMS1-216ENST00000447734 ZNF408Q9H9D4 720 aa5.31□□□□□ -1.56
PMS1-216ENST00000447734 RAB6BQ9NRW1 208 aa5.31□□□□□ -1.56
PMS1-216ENST00000447734 FAM13BQ9NYF5 915 aa5.31□□□□□ -1.56
PMS1-216ENST00000447734 KLK14Q9P0G3 267 aa5.31□□□□□ -1.56
PMS1-216ENST00000447734 SIRPGQ9P1W8 387 aa5.31□□□□□ -1.56
PMS1-216ENST00000447734 ZNF232Q9UNY5 417 aa5.31□□□□□ -1.56
PMS1-216ENST00000447734 A6NHS1 94 aa5.3□□□□□ -1.56
PMS1-216ENST00000447734 CDK2AP1O14519 115 aa5.3□□□□□ -1.56
PMS1-216ENST00000447734 PARNO95453 639 aaKnown RBP5.3□□□□□ -1.56
PMS1-216ENST00000447734 ITGB2P05107 769 aa5.3□□□□□ -1.56
PMS1-216ENST00000447734 FSHRP23945 695 aa5.3□□□□□ -1.56
PMS1-216ENST00000447734 IRS1P35568 1242 aa5.3□□□□□ -1.56
PMS1-216ENST00000447734 POTEAQ6S8J7 498 aa5.3□□□□□ -1.56
PMS1-216ENST00000447734 ANKS3Q6ZW76 656 aa5.3□□□□□ -1.56
PMS1-216ENST00000447734 TREML1Q86YW5 311 aa5.3□□□□□ -1.56
PMS1-216ENST00000447734 FAM9AQ8IZU1 332 aaPredicted RBP5.3□□□□□ -1.56
PMS1-216ENST00000447734 ZNF784Q8NCA9 323 aaPredicted RBP5.3□□□□□ -1.56
PMS1-216ENST00000447734 RNPC3Q96LT9 517 aaKnown RBP5.3□□□□□ -1.56
PMS1-216ENST00000447734 SPON2Q9BUD6 331 aa5.3□□□□□ -1.56
PMS1-216ENST00000447734 GGNBP2Q9H3C7 697 aa5.3□□□□□ -1.56
PMS1-216ENST00000447734 MYH16Q9H6N6 1097 aa5.3□□□□□ -1.56
PMS1-216ENST00000447734 COPRSQ9NQ92 184 aa5.3□□□□□ -1.56
PMS1-216ENST00000447734 HCN4Q9Y3Q4 1203 aa5.3□□□□□ -1.56
PMS1-216ENST00000447734 PRKAB1Q9Y478 270 aa5.3□□□□□ -1.56
PMS1-216ENST00000447734 RIPOR2Q9Y4F9 1068 aa5.3□□□□□ -1.56
PMS1-216ENST00000447734 USP3Q9Y6I4 520 aa5.3□□□□□ -1.56
PMS1-216ENST00000447734 EML1O00423 815 aa5.29□□□□□ -1.56
PMS1-216ENST00000447734 TPD52L2O43399 206 aaKnown RBP5.29□□□□□ -1.56
PMS1-216ENST00000447734 NASPP49321 788 aaPredicted RBP5.29□□□□□ -1.56
PMS1-216ENST00000447734 HIRAP54198 1017 aaPredicted RBP5.29□□□□□ -1.56
PMS1-216ENST00000447734 CBLBQ13191 982 aa5.29□□□□□ -1.56
PMS1-216ENST00000447734 PLEKHG6Q3KR16 790 aa5.29□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms