RNA–Protein interactions for RNA: ENST00000447540.5

CHD9-203, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 5 BASIC

Gene CHD9, Length 11,509 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-203ENST00000447540 TTC19Q6DKK2 380 aaPredicted RBP3.33□□□□□ -1.88
CHD9-203ENST00000447540 NAA16Q6N069 864 aaPredicted RBP3.33□□□□□ -1.88
CHD9-203ENST00000447540 ATP6V0A4Q9HBG4 840 aa3.33□□□□□ -1.88
CHD9-203ENST00000447540 CTDP1Q9Y5B0 961 aaPredicted RBP3.33□□□□□ -1.88
CHD9-203ENST00000447540 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP3.33□□□□□ -1.881e-6■■□□□ 13.9
CHD9-203ENST00000447540 CADPSQ9ULU8 1353 aa3.33□□□□□ -1.88
CHD9-203ENST00000447540 TMCC1O94876 653 aa3.33□□□□□ -1.88
CHD9-203ENST00000447540 ATP2B3Q16720 1220 aa3.33□□□□□ -1.88
CHD9-203ENST00000447540 CRELD2Q6UXH1 353 aaPredicted RBP3.33□□□□□ -1.88
CHD9-203ENST00000447540 OTUD6AQ7L8S5 288 aa3.33□□□□□ -1.88
CHD9-203ENST00000447540 SMARCC2Q8TAQ2 1214 aa3.33□□□□□ -1.88
CHD9-203ENST00000447540 RNF217Q8TC41 542 aa3.33□□□□□ -1.88
CHD9-203ENST00000447540 IQCDQ96DY2 449 aa3.33□□□□□ -1.88
CHD9-203ENST00000447540 ABCC11Q96J66 1382 aa3.33□□□□□ -1.88
CHD9-203ENST00000447540 SNAPC4Q5SXM2 1469 aa3.33□□□□□ -1.88
CHD9-203ENST00000447540 ACBD5Q5T8D3 534 aaPredicted RBP3.33□□□□□ -1.88
CHD9-203ENST00000447540 IQCA1Q86XH1 822 aa3.33□□□□□ -1.88
CHD9-203ENST00000447540 TSC1Q92574 1164 aa3.33□□□□□ -1.88
CHD9-203ENST00000447540 TEKT1Q969V4 418 aa3.33□□□□□ -1.88
CHD9-203ENST00000447540 OAS2P29728 719 aaKnown RBP3.33□□□□□ -1.88
CHD9-203ENST00000447540 MAP3K9P80192 1104 aa3.33□□□□□ -1.88
CHD9-203ENST00000447540 MVPQ14764 893 aaKnown RBP3.33□□□□□ -1.88
CHD9-203ENST00000447540 SMC1BQ8NDV3 1235 aa3.33□□□□□ -1.88
CHD9-203ENST00000447540 N4BP2L2Q92802 583 aaPredicted RBP3.33□□□□□ -1.88
CHD9-203ENST00000447540 CCDC85AQ96PX6 553 aaPredicted RBP3.33□□□□□ -1.88
CHD9-203ENST00000447540 NSRP1Q9H0G5 558 aaKnown RBP3.33□□□□□ -1.88
CHD9-203ENST00000447540 CFAP73A6NFT4 308 aa3.33□□□□□ -1.88
CHD9-203ENST00000447540 ZNF165P49910 485 aa3.33□□□□□ -1.88
CHD9-203ENST00000447540 TUBA3CQ13748 450 aa3.33□□□□□ -1.88
CHD9-203ENST00000447540 STX1AQ16623 288 aa3.33□□□□□ -1.88
CHD9-203ENST00000447540 LMOD2Q6P5Q4 547 aa3.33□□□□□ -1.88
CHD9-203ENST00000447540 CFAP61Q8NHU2 1237 aa3.33□□□□□ -1.88
CHD9-203ENST00000447540 TFIP11Q9UBB9 837 aaKnown RBP3.33□□□□□ -1.88
CHD9-203ENST00000447540 TMCO1Q9UM00 188 aa3.33□□□□□ -1.88
CHD9-203ENST00000447540 MYOM3Q5VTT5 1437 aa3.33□□□□□ -1.88
CHD9-203ENST00000447540 IFT140Q96RY7 1462 aa3.33□□□□□ -1.88
CHD9-203ENST00000447540 NEURL4Q96JN8 1562 aa3.33□□□□□ -1.88
CHD9-203ENST00000447540 GIGYF1O75420 1035 aaPredicted RBP3.33□□□□□ -1.88
CHD9-203ENST00000447540 MSL3P1P0C860 447 aa3.33□□□□□ -1.88
CHD9-203ENST00000447540 RPRD2Q5VT52 1461 aaKnown RBP3.33□□□□□ -1.88
CHD9-203ENST00000447540 ZFAND2BQ8WV99 257 aa3.33□□□□□ -1.88
CHD9-203ENST00000447540 MPHOSPH9Q99550 1183 aa3.33□□□□□ -1.88
CHD9-203ENST00000447540 ZNF644Q9H582 1327 aaPredicted RBP3.33□□□□□ -1.88
CHD9-203ENST00000447540 SPTY2D1Q68D10 685 aaPredicted RBP3.33□□□□□ -1.88
CHD9-203ENST00000447540 AMOTL1Q8IY63 956 aa3.33□□□□□ -1.88
CHD9-203ENST00000447540 PRPF38AQ8NAV1 312 aaKnown RBP3.33□□□□□ -1.88
CHD9-203ENST00000447540 PIP4K2CQ8TBX8 421 aa3.33□□□□□ -1.88
CHD9-203ENST00000447540 BICD1Q96G01 975 aa3.33□□□□□ -1.88
CHD9-203ENST00000447540 TRIM4Q9C037 500 aa3.33□□□□□ -1.88
CHD9-203ENST00000447540 RBSNQ9H1K0 784 aa3.33□□□□□ -1.88
CHD9-203ENST00000447540 UNC45AQ9H3U1 944 aa3.33□□□□□ -1.88
CHD9-203ENST00000447540 LMBRD1Q9NUN5 540 aa3.33□□□□□ -1.88
CHD9-203ENST00000447540 PDZRN3Q9UPQ7 1066 aa3.33□□□□□ -1.88
CHD9-203ENST00000447540 NDUFAB1O14561 156 aa3.33□□□□□ -1.88
CHD9-203ENST00000447540 H2AFXP16104 143 aaPredicted RBP3.33□□□□□ -1.88
CHD9-203ENST00000447540 MRPS35P82673 323 aaKnown RBP3.33□□□□□ -1.88
CHD9-203ENST00000447540 TRIM58Q8NG06 486 aa3.33□□□□□ -1.88
CHD9-203ENST00000447540 L2HGDHQ9H9P8 463 aa3.33□□□□□ -1.88
CHD9-203ENST00000447540 MAGEC2Q9UBF1 373 aaPredicted RBP3.33□□□□□ -1.88
CHD9-203ENST00000447540 CIDEBQ9UHD4 219 aa3.33□□□□□ -1.88
CHD9-203ENST00000447540 ARHGAP6O43182 974 aa3.33□□□□□ -1.88
CHD9-203ENST00000447540 CNGA1P29973 690 aa3.33□□□□□ -1.88
CHD9-203ENST00000447540 NUGGCQ68CJ6 796 aa3.33□□□□□ -1.88
CHD9-203ENST00000447540 ANKRD24Q8TF21 1146 aa3.33□□□□□ -1.88
CHD9-203ENST00000447540 TSC22D3Q99576 134 aa3.33□□□□□ -1.88
CHD9-203ENST00000447540 TNMDQ9H2S6 317 aa3.33□□□□□ -1.88
CHD9-203ENST00000447540 PARD3Q8TEW0 1356 aa3.32□□□□□ -1.88
CHD9-203ENST00000447540 KDM1AO60341 852 aa3.32□□□□□ -1.88
CHD9-203ENST00000447540 VDRP11473 427 aa3.32□□□□□ -1.88
CHD9-203ENST00000447540 SEPT7Q16181 437 aaKnown RBP3.32□□□□□ -1.88
CHD9-203ENST00000447540 INAQ16352 499 aa3.32□□□□□ -1.88
CHD9-203ENST00000447540 CAPRIN2Q6IMN6 1127 aaKnown RBP3.32□□□□□ -1.88
CHD9-203ENST00000447540 ARMCX6Q7L4S7 300 aa3.32□□□□□ -1.88
CHD9-203ENST00000447540 APBB1IPQ7Z5R6 666 aaPredicted RBP3.32□□□□□ -1.88
CHD9-203ENST00000447540 CACNA2D3Q8IZS8 1091 aa3.32□□□□□ -1.88
CHD9-203ENST00000447540 DRAXINQ8NBI3 349 aaPredicted RBP3.32□□□□□ -1.88
CHD9-203ENST00000447540 USP33Q8TEY7 942 aa3.32□□□□□ -1.88
CHD9-203ENST00000447540 RTF1Q92541 710 aaKnown RBP3.32□□□□□ -1.88
CHD9-203ENST00000447540 POLR3CQ9BUI4 534 aaPredicted RBP3.32□□□□□ -1.88
CHD9-203ENST00000447540 ATP8A1Q9Y2Q0 1164 aa3.32□□□□□ -1.88
CHD9-203ENST00000447540 ARHGEF12Q9NZN5 1544 aa3.32□□□□□ -1.88
CHD9-203ENST00000447540 SLFN5Q08AF3 891 aa3.32□□□□□ -1.88
CHD9-203ENST00000447540 MICAL1Q8TDZ2 1067 aa3.32□□□□□ -1.88
CHD9-203ENST00000447540 THOC1Q96FV9 657 aaKnown RBP3.32□□□□□ -1.88
CHD9-203ENST00000447540 LIMCH1Q9UPQ0 1083 aa3.32□□□□□ -1.88
CHD9-203ENST00000447540 WDR37Q9Y2I8 494 aa3.32□□□□□ -1.88
CHD9-203ENST00000447540 KDM5DQ9BY66 1539 aa3.32□□□□□ -1.88
CHD9-203ENST00000447540 KDM5AP29375 1690 aaKnown RBP3.32□□□□□ -1.88
CHD9-203ENST00000447540 BLMP54132 1417 aaPredicted RBP3.32□□□□□ -1.88
CHD9-203ENST00000447540 CCDC162PA2VCL2 907 aa3.32□□□□□ -1.88
CHD9-203ENST00000447540 IKQ13123 557 aaPredicted RBP3.32□□□□□ -1.88
CHD9-203ENST00000447540 CCDC181Q5TID7 509 aa3.32□□□□□ -1.88
CHD9-203ENST00000447540 SARM1Q6SZW1 724 aa3.32□□□□□ -1.88
CHD9-203ENST00000447540 DDX46Q7L014 1031 aaKnown RBP3.32□□□□□ -1.88
CHD9-203ENST00000447540 ZNF777Q9ULD5 760 aaPredicted RBP3.32□□□□□ -1.88
CHD9-203ENST00000447540 SH3BP1Q9Y3L3 701 aa3.32□□□□□ -1.88
CHD9-203ENST00000447540 IQCA1LA6NCM1 817 aa3.32□□□□□ -1.88
CHD9-203ENST00000447540 PECAM1P16284 738 aaPredicted RBP3.32□□□□□ -1.88
CHD9-203ENST00000447540 RASSF2P50749 326 aa3.32□□□□□ -1.88
CHD9-203ENST00000447540 RBM6P78332 1123 aaKnown RBP3.32□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms