RNA–Protein interactions for RNA: ENST00000447182.6

SDCBP-204, Transcript of syndecan binding protein, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SDCBP, Length 2,103 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-204ENST00000447182 TAF6LQ9Y6J9 622 aa22.61■■□□□ 1.21
SDCBP-204ENST00000447182 RFX7Q2KHR2 1363 aa22.61■■□□□ 1.21
SDCBP-204ENST00000447182 GOLGA6L4A6NEF3 574 aa22.6■■□□□ 1.21
SDCBP-204ENST00000447182 ESCO1Q5FWF5 840 aa22.6■■□□□ 1.21
SDCBP-204ENST00000447182 ANKRD24Q8TF21 1146 aa22.6■■□□□ 1.21
SDCBP-204ENST00000447182 TCEANC2Q96MN5 208 aa22.6■■□□□ 1.21
SDCBP-204ENST00000447182 SIL1Q9H173 461 aa22.6■■□□□ 1.21
SDCBP-204ENST00000447182 CLSTN2Q9H4D0 955 aa22.6■■□□□ 1.21
SDCBP-204ENST00000447182 NEURL1BA8MQ27 555 aa22.6■■□□□ 1.21
SDCBP-204ENST00000447182 CAMK4Q16566 473 aa22.6■■□□□ 1.21
SDCBP-204ENST00000447182 RIC3Q7Z5B4 369 aa22.6■■□□□ 1.21
SDCBP-204ENST00000447182 SPC24Q8NBT2 197 aa22.6■■□□□ 1.21
SDCBP-204ENST00000447182 ATP5JP18859 108 aa22.59■■□□□ 1.21
SDCBP-204ENST00000447182 NEXNQ0ZGT2 675 aa22.59■■□□□ 1.21
SDCBP-204ENST00000447182 AIMP1Q12904 312 aaKnown RBP22.59■■□□□ 1.21
SDCBP-204ENST00000447182 GTF3C6Q969F1 213 aa22.59■■□□□ 1.21
SDCBP-204ENST00000447182 GCKRQ14397 625 aa22.58■■□□□ 1.21
SDCBP-204ENST00000447182 SMAP1Q8IYB5 467 aaPredicted RBP22.58■■□□□ 1.21
SDCBP-204ENST00000447182 CBX8Q9HC52 389 aa22.58■■□□□ 1.21
SDCBP-204ENST00000447182 COPRSQ9NQ92 184 aa22.58■■□□□ 1.21
SDCBP-204ENST00000447182 LUZP1Q86V48 1076 aa22.58■■□□□ 1.2
SDCBP-204ENST00000447182 CHMP3Q9Y3E7 222 aa22.58■■□□□ 1.2
SDCBP-204ENST00000447182 CHAF1AQ13111 956 aaPredicted RBP22.57■■□□□ 1.2
SDCBP-204ENST00000447182 ANO6Q4KMQ2 910 aa22.57■■□□□ 1.2
SDCBP-204ENST00000447182 ARHGAP30Q7Z6I6 1101 aaPredicted RBP22.57■■□□□ 1.2
SDCBP-204ENST00000447182 TDRD7Q8NHU6 1098 aaKnown RBP22.57■■□□□ 1.2
SDCBP-204ENST00000447182 TFIP11Q9UBB9 837 aaKnown RBP22.57■■□□□ 1.2
SDCBP-204ENST00000447182 CKAP2LQ8IYA6 745 aa22.57■■□□□ 1.2
SDCBP-204ENST00000447182 KLHDC4Q8TBB5 520 aa22.57■■□□□ 1.2
SDCBP-204ENST00000447182 JARID2Q92833 1246 aaPredicted RBP22.57■■□□□ 1.2
SDCBP-204ENST00000447182 COL15A1P39059 1388 aa22.56■■□□□ 1.2
SDCBP-204ENST00000447182 CAVIN2O95810 425 aa22.56■■□□□ 1.2
SDCBP-204ENST00000447182 RESTQ13127 1097 aa22.56■■□□□ 1.2
SDCBP-204ENST00000447182 PLA2G4DQ86XP0 818 aa22.56■■□□□ 1.2
SDCBP-204ENST00000447182 NEK1Q96PY6 1258 aa22.56■■□□□ 1.2
SDCBP-204ENST00000447182 METTL22Q9BUU2 404 aaPredicted RBP22.56■■□□□ 1.2
SDCBP-204ENST00000447182 C5P01031 1676 aa22.56■■□□□ 1.2
SDCBP-204ENST00000447182 EPHA10Q5JZY3 1008 aa22.55■■□□□ 1.2
SDCBP-204ENST00000447182 ZNF790Q6PG37 636 aa22.55■■□□□ 1.2
SDCBP-204ENST00000447182 PGBD1Q96JS3 809 aa22.55■■□□□ 1.2
SDCBP-204ENST00000447182 PTGS1P23219 599 aa22.55■■□□□ 1.2
SDCBP-204ENST00000447182 STK3Q13188 491 aa22.55■■□□□ 1.2
SDCBP-204ENST00000447182 TSC1Q92574 1164 aa22.55■■□□□ 1.2
SDCBP-204ENST00000447182 ZSCAN16Q9H4T2 348 aaPredicted RBP22.55■■□□□ 1.2
SDCBP-204ENST00000447182 DBNLQ9UJU6 430 aaKnown RBP22.55■■□□□ 1.2
SDCBP-204ENST00000447182 U3KPZ7 1027 aaPredicted RBP22.55■■□□□ 1.2
SDCBP-204ENST00000447182 RFX5P48382 616 aaPredicted RBP22.54■■□□□ 1.2
SDCBP-204ENST00000447182 NR1I2O75469 434 aa22.54■■□□□ 1.2
SDCBP-204ENST00000447182 TNNI3KQ59H18 835 aa22.54■■□□□ 1.2
SDCBP-204ENST00000447182 BCL2L12Q9HB09 334 aa22.54■■□□□ 1.2
SDCBP-204ENST00000447182 FPGT-TNNI3KV9GXZ4 949 aa22.54■■□□□ 1.2
SDCBP-204ENST00000447182 SCN11AQ9UI33 1791 aa22.53■■□□□ 1.2
SDCBP-204ENST00000447182 ZNF75DP51815 510 aa22.53■■□□□ 1.2
SDCBP-204ENST00000447182 EDC3Q96F86 508 aaKnown RBP22.53■■□□□ 1.2
SDCBP-204ENST00000447182 JAK2O60674 1132 aa22.52■■□□□ 1.2
SDCBP-204ENST00000447182 PTPN12Q05209 780 aaKnown RBP22.52■■□□□ 1.2
SDCBP-204ENST00000447182 XAGE3Q8WTP9 111 aa22.52■■□□□ 1.2
SDCBP-204ENST00000447182 BRF1Q92994 677 aa22.52■■□□□ 1.2
SDCBP-204ENST00000447182 CFAP45Q9UL16 551 aa22.52■■□□□ 1.2
SDCBP-204ENST00000447182 ZNF609O15014 1411 aa22.52■■□□□ 1.2
SDCBP-204ENST00000447182 RIOK3O14730 519 aaKnown RBP22.52■■□□□ 1.2
SDCBP-204ENST00000447182 CTIFO43310 598 aaKnown RBP22.52■■□□□ 1.2
SDCBP-204ENST00000447182 RABL6Q3YEC7 729 aaPredicted RBP22.52■■□□□ 1.2
SDCBP-204ENST00000447182 CCDC186Q7Z3E2 898 aa22.52■■□□□ 1.2
SDCBP-204ENST00000447182 BICD2Q8TD16 824 aa22.52■■□□□ 1.2
SDCBP-204ENST00000447182 MYD88Q99836 296 aa22.52■■□□□ 1.2
SDCBP-204ENST00000447182 LLPHQ9BRT6 129 aaKnown RBP22.52■■□□□ 1.2
SDCBP-204ENST00000447182 ZNF165P49910 485 aa22.51■■□□□ 1.19
SDCBP-204ENST00000447182 Q6ZUG5 572 aa22.51■■□□□ 1.19
SDCBP-204ENST00000447182 SMARCC2Q8TAQ2 1214 aa22.51■■□□□ 1.19
SDCBP-204ENST00000447182 SLC52A2Q9HAB3 445 aa22.51■■□□□ 1.19
SDCBP-204ENST00000447182 AXIN2Q9Y2T1 843 aa22.51■■□□□ 1.19
SDCBP-204ENST00000447182 COPS6Q7L5N1 327 aa22.51■■□□□ 1.19
SDCBP-204ENST00000447182 TRIM5Q9C035 493 aa22.51■■□□□ 1.19
SDCBP-204ENST00000447182 CDC25BP30305 580 aa22.5■■□□□ 1.19
SDCBP-204ENST00000447182 TFCP2Q12800 502 aa22.5■■□□□ 1.19
SDCBP-204ENST00000447182 MCMDC2Q4G0Z9 681 aa22.5■■□□□ 1.19
SDCBP-204ENST00000447182 LRP10Q7Z4F1 713 aa22.5■■□□□ 1.19
SDCBP-204ENST00000447182 ANKLE2Q86XL3 938 aa22.5■■□□□ 1.19
SDCBP-204ENST00000447182 RBM33Q96EV2 1170 aaKnown RBP22.5■■□□□ 1.19
SDCBP-204ENST00000447182 HAUS7Q99871 368 aa22.5■■□□□ 1.19
SDCBP-204ENST00000447182 CYP21A2P08686 494 aa22.49■■□□□ 1.19
SDCBP-204ENST00000447182 MYL6BP14649 208 aa22.49■■□□□ 1.19
SDCBP-204ENST00000447182 MYH15Q9Y2K3 1946 aa22.49■■□□□ 1.19
SDCBP-204ENST00000447182 KDM6AO15550 1401 aaPredicted RBP22.49■■□□□ 1.19
SDCBP-204ENST00000447182 H3BQV1 296 aa22.49■■□□□ 1.19
SDCBP-204ENST00000447182 IFFO2Q5TF58 517 aa22.49■■□□□ 1.19
SDCBP-204ENST00000447182 ANKRD13DQ6ZTN6 518 aa22.49■■□□□ 1.19
SDCBP-204ENST00000447182 ANKRD7Q92527 254 aa22.49■■□□□ 1.19
SDCBP-204ENST00000447182 TRPM3Q9HCF6 1732 aaPredicted RBP22.48■■□□□ 1.19
SDCBP-204ENST00000447182 PFKFB2O60825 505 aa22.48■■□□□ 1.19
SDCBP-204ENST00000447182 HMGB1P09429 215 aaKnown RBP22.48■■□□□ 1.19
SDCBP-204ENST00000447182 SLC39A6Q13433 755 aa22.48■■□□□ 1.19
SDCBP-204ENST00000447182 NAA16Q6N069 864 aaPredicted RBP22.48■■□□□ 1.19
SDCBP-204ENST00000447182 ZSCAN25Q6NSZ9 544 aa22.48■■□□□ 1.19
SDCBP-204ENST00000447182 ERBB3P21860 1342 aa22.48■■□□□ 1.19
SDCBP-204ENST00000447182 SH3TC1Q8TE82 1336 aa22.48■■□□□ 1.19
SDCBP-204ENST00000447182 TICAM2Q86XR7 235 aa22.48■■□□□ 1.19
SDCBP-204ENST00000447182 DRC7Q8IY82 874 aa22.48■■□□□ 1.19
SDCBP-204ENST00000447182 ARID3AQ99856 593 aa22.48■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms