RNA–Protein interactions for RNA: ENST00000447048.1

RUBCN-205, Transcript of RUN and cysteine rich domain containing beclin 1 interacting protein, humanhuman

TSL 3

Gene RUBCN, Length 442 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUBCN-205ENST00000447048 SRGNP10124 158 aa12.12□□□□□ -0.47
RUBCN-205ENST00000447048 C3orf67Q6ZVT6 689 aa12.12□□□□□ -0.47
RUBCN-205ENST00000447048 JARID2Q92833 1246 aaPredicted RBP12.12□□□□□ -0.47
RUBCN-205ENST00000447048 RPGRQ92834 1020 aaKnown RBP12.12□□□□□ -0.47
RUBCN-205ENST00000447048 MEIS3Q99687 375 aa12.12□□□□□ -0.47
RUBCN-205ENST00000447048 SYT17Q9BSW7 474 aa12.12□□□□□ -0.47
RUBCN-205ENST00000447048 USP44Q9H0E7 712 aa12.12□□□□□ -0.47
RUBCN-205ENST00000447048 DDX19BQ9UMR2 479 aa12.12□□□□□ -0.47
RUBCN-205ENST00000447048 SBF1O95248 1867 aa12.12□□□□□ -0.47
RUBCN-205ENST00000447048 CHD4Q14839 1912 aa12.11□□□□□ -0.47
RUBCN-205ENST00000447048 NPR1P16066 1061 aa12.11□□□□□ -0.47
RUBCN-205ENST00000447048 CHRNA5P30532 468 aa12.11□□□□□ -0.47
RUBCN-205ENST00000447048 CCDC152Q4G0S7 254 aa12.11□□□□□ -0.47
RUBCN-205ENST00000447048 C20orf194Q5TEA3 1177 aa12.11□□□□□ -0.47
RUBCN-205ENST00000447048 STYK1Q6J9G0 422 aa12.11□□□□□ -0.47
RUBCN-205ENST00000447048 MASTLQ96GX5 879 aa12.11□□□□□ -0.47
RUBCN-205ENST00000447048 SUCLG2Q96I99 432 aa12.11□□□□□ -0.47
RUBCN-205ENST00000447048 HDAC5Q9UQL6 1122 aa12.11□□□□□ -0.47
RUBCN-205ENST00000447048 MYH13Q9UKX3 1938 aa12.11□□□□□ -0.47
RUBCN-205ENST00000447048 DPEP1P16444 411 aa12.1□□□□□ -0.47
RUBCN-205ENST00000447048 HOXA10P31260 410 aaPredicted RBP12.1□□□□□ -0.47
RUBCN-205ENST00000447048 SF3B3Q15393 1217 aaKnown RBP12.1□□□□□ -0.47
RUBCN-205ENST00000447048 CHMP4BQ9H444 224 aaKnown RBP12.1□□□□□ -0.47
RUBCN-205ENST00000447048 BICC1Q9H694 974 aaKnown RBP12.1□□□□□ -0.47
RUBCN-205ENST00000447048 COG6Q9Y2V7 657 aa12.1□□□□□ -0.47
RUBCN-205ENST00000447048 DUOX1Q9NRD9 1551 aa12.09□□□□□ -0.47
RUBCN-205ENST00000447048 A0A0G2JLW4 131 aa12.09□□□□□ -0.47
RUBCN-205ENST00000447048 FOXO4P98177 505 aa12.09□□□□□ -0.47
RUBCN-205ENST00000447048 FAM161AQ3B820 660 aa12.09□□□□□ -0.47
RUBCN-205ENST00000447048 DDX46Q7L014 1031 aaKnown RBP12.09□□□□□ -0.47
RUBCN-205ENST00000447048 TTLL11Q8NHH1 800 aa12.09□□□□□ -0.47
RUBCN-205ENST00000447048 ZNF622Q969S3 477 aaKnown RBP eCLIP12.09□□□□□ -0.471e-9■□□□□ 8.3
RUBCN-205ENST00000447048 RBM17Q96I25 401 aaKnown RBP12.09□□□□□ -0.47
RUBCN-205ENST00000447048 KAZALD1Q96I82 304 aa12.09□□□□□ -0.47
RUBCN-205ENST00000447048 SUPT16HQ9Y5B9 1047 aaKnown RBP12.09□□□□□ -0.47
RUBCN-205ENST00000447048 GNAI2P04899 355 aa12.08□□□□□ -0.48
RUBCN-205ENST00000447048 KCNA3P22001 575 aa12.08□□□□□ -0.48
RUBCN-205ENST00000447048 RABL6Q3YEC7 729 aaPredicted RBP12.08□□□□□ -0.48
RUBCN-205ENST00000447048 PRPF40BQ6NWY9 871 aaKnown RBP12.08□□□□□ -0.48
RUBCN-205ENST00000447048 CNKSR1Q969H4 720 aa12.08□□□□□ -0.48
RUBCN-205ENST00000447048 CRAMP1Q96RY5 1269 aa12.08□□□□□ -0.48
RUBCN-205ENST00000447048 PIM2Q9P1W9 311 aa12.08□□□□□ -0.48
RUBCN-205ENST00000447048 CHMP3Q9Y3E7 222 aa12.08□□□□□ -0.48
RUBCN-205ENST00000447048 LRRFIP2Q9Y608 721 aaKnown RBP12.08□□□□□ -0.48
RUBCN-205ENST00000447048 PSME4Q14997 1843 aa12.07□□□□□ -0.48
RUBCN-205ENST00000447048 ZBTB7BO15156 539 aaPredicted RBP12.07□□□□□ -0.48
RUBCN-205ENST00000447048 CSF1RP07333 972 aa12.07□□□□□ -0.48
RUBCN-205ENST00000447048 ALDH1B1P30837 517 aa12.07□□□□□ -0.48
RUBCN-205ENST00000447048 GRAPQ13588 217 aa12.07□□□□□ -0.48
RUBCN-205ENST00000447048 DALRD3Q5D0E6 543 aaKnown RBP12.07□□□□□ -0.48
RUBCN-205ENST00000447048 EPHA10Q5JZY3 1008 aa12.07□□□□□ -0.48
RUBCN-205ENST00000447048 LMBR1LQ6UX01 489 aa12.07□□□□□ -0.48
RUBCN-205ENST00000447048 TTLL6Q8N841 843 aa12.07□□□□□ -0.48
RUBCN-205ENST00000447048 ANKRD44Q8N8A2 993 aa12.07□□□□□ -0.48
RUBCN-205ENST00000447048 GRAPLQ8TC17 118 aaPredicted RBP12.07□□□□□ -0.48
RUBCN-205ENST00000447048 SNED1Q8TER0 1413 aa12.07□□□□□ -0.48
RUBCN-205ENST00000447048 CCDC85AQ96PX6 553 aaPredicted RBP12.07□□□□□ -0.48
RUBCN-205ENST00000447048 CDC5LQ99459 802 aaKnown RBP12.07□□□□□ -0.48
RUBCN-205ENST00000447048 GREM2Q9H772 168 aa12.07□□□□□ -0.48
RUBCN-205ENST00000447048 PPEF1O14829 653 aaPredicted RBP12.06□□□□□ -0.48
RUBCN-205ENST00000447048 ITGA6P23229 1130 aa12.06□□□□□ -0.48
RUBCN-205ENST00000447048 TMC4Q7Z404 712 aa12.06□□□□□ -0.48
RUBCN-205ENST00000447048 ANKRD18BA2A2Z9 1011 aa12.05□□□□□ -0.48
RUBCN-205ENST00000447048 IFIT5Q13325 482 aaKnown RBP12.05□□□□□ -0.48
RUBCN-205ENST00000447048 MTX1Q13505 466 aa12.05□□□□□ -0.48
RUBCN-205ENST00000447048 CCDC57Q2TAC2 916 aa12.05□□□□□ -0.48
RUBCN-205ENST00000447048 CRBNQ96SW2 442 aa12.05□□□□□ -0.48
RUBCN-205ENST00000447048 C1orf115Q9H7X2 142 aa12.05□□□□□ -0.48
RUBCN-205ENST00000447048 SEC31BQ9NQW1 1179 aa12.05□□□□□ -0.48
RUBCN-205ENST00000447048 TAF7LQ5H9L4 462 aa12.04□□□□□ -0.48
RUBCN-205ENST00000447048 SOGA3Q5TF21 947 aa12.04□□□□□ -0.48
RUBCN-205ENST00000447048 ANKRD18AQ8IVF6 992 aa12.04□□□□□ -0.48
RUBCN-205ENST00000447048 CELF1Q92879 486 aaKnown RBP12.04□□□□□ -0.48
RUBCN-205ENST00000447048 ZBTB40Q9NUA8 1239 aa12.04□□□□□ -0.48
RUBCN-205ENST00000447048 WWC3Q9ULE0 1092 aa12.04□□□□□ -0.48
RUBCN-205ENST00000447048 BCS1LQ9Y276 419 aa12.04□□□□□ -0.48
RUBCN-205ENST00000447048 ZNF646O15015 1829 aaPredicted RBP12.04□□□□□ -0.48
RUBCN-205ENST00000447048 SRGAP3O43295 1099 aa12.03□□□□□ -0.48
RUBCN-205ENST00000447048 BBOX1O75936 387 aa12.03□□□□□ -0.48
RUBCN-205ENST00000447048 IGHMBP2P38935 993 aaKnown RBP12.03□□□□□ -0.48
RUBCN-205ENST00000447048 PELP1Q8IZL8 1130 aaKnown RBP12.03□□□□□ -0.48
RUBCN-205ENST00000447048 RPS8P62241 208 aaKnown RBP12.02□□□□□ -0.49
RUBCN-205ENST00000447048 AAMPQ13685 434 aa12.02□□□□□ -0.49
RUBCN-205ENST00000447048 CCDC93Q567U6 631 aa12.02□□□□□ -0.49
RUBCN-205ENST00000447048 CEP85Q6P2H3 762 aa12.02□□□□□ -0.49
RUBCN-205ENST00000447048 MPHOSPH8Q99549 860 aa12.02□□□□□ -0.49
RUBCN-205ENST00000447048 TMX4Q9H1E5 349 aaPredicted RBP12.02□□□□□ -0.49
RUBCN-205ENST00000447048 ATP6V0A2Q9Y487 856 aa12.02□□□□□ -0.49
RUBCN-205ENST00000447048 C21orf2O43822 256 aa12.01□□□□□ -0.49
RUBCN-205ENST00000447048 YBX3P16989 372 aaKnown RBP eCLIP12.01□□□□□ -0.49
RUBCN-205ENST00000447048 CC2D2BQ6DHV5 1058 aa12.01□□□□□ -0.49
RUBCN-205ENST00000447048 C7orf43Q8WVR3 580 aa12.01□□□□□ -0.49
RUBCN-205ENST00000447048 BSDC1Q9NW68 430 aaPredicted RBP12.01□□□□□ -0.49
RUBCN-205ENST00000447048 PNMA6EA0A0J9YXQ4 647 aa12□□□□□ -0.49
RUBCN-205ENST00000447048 RFX5P48382 616 aaPredicted RBP12□□□□□ -0.49
RUBCN-205ENST00000447048 GPR162Q16538 588 aa12□□□□□ -0.49
RUBCN-205ENST00000447048 GRIPAP1Q4V328 841 aa12□□□□□ -0.49
RUBCN-205ENST00000447048 SP8Q8IXZ3 490 aa12□□□□□ -0.49
RUBCN-205ENST00000447048 SSH3Q8TE77 659 aa12□□□□□ -0.49
RUBCN-205ENST00000447048 ZNF219Q9P2Y4 722 aaPredicted RBP12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms