RNA–Protein interactions for RNA: ENST00000445220.5

SHANK3-203, Transcript of SH3 and multiple ankyrin repeat domains 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHANK3, Length 5,175 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK3-203ENST00000445220 GTF3C6Q969F1 213 aa21.33■■□□□ 1
SHANK3-203ENST00000445220 PYM1Q9BRP8 204 aaKnown RBP21.33■■□□□ 1
SHANK3-203ENST00000445220 HMG20BQ9P0W2 317 aa21.33■■□□□ 1
SHANK3-203ENST00000445220 ANKS4BQ8N8V4 417 aa21.32■■□□□ 1
SHANK3-203ENST00000445220 GOLIM4O00461 696 aa21.32■■□□□ 1
SHANK3-203ENST00000445220 CYLC1P35663 651 aaPredicted RBP21.32■■□□□ 1
SHANK3-203ENST00000445220 CCDC155Q8N6L0 562 aa21.32■■□□□ 1
SHANK3-203ENST00000445220 ARHGAP45Q92619 1136 aa21.32■■□□□ 1
SHANK3-203ENST00000445220 PCDHB15Q9Y5E8 787 aa21.32■■□□□ 1
SHANK3-203ENST00000445220 SSRP1Q08945 709 aaKnown RBP21.31■■□□□ 1
SHANK3-203ENST00000445220 MYD88Q99836 296 aa21.31■■□□□ 1
SHANK3-203ENST00000445220 FSD2A1L4K1 749 aa21.31■■□□□ 1
SHANK3-203ENST00000445220 SYKP43405 635 aa21.31■■□□□ 1
SHANK3-203ENST00000445220 ATP2B2Q01814 1243 aa21.31■■□□□ 1
SHANK3-203ENST00000445220 SYT10Q6XYQ8 523 aa21.31■■□□□ 1
SHANK3-203ENST00000445220 PIBF1Q8WXW3 757 aa21.31■■□□□ 1
SHANK3-203ENST00000445220 ECHDC1Q9NTX5 307 aa21.31■■□□□ 1
SHANK3-203ENST00000445220 WWC2Q6AWC2 1192 aa21.31■■□□□ 1
SHANK3-203ENST00000445220 RSRC1Q96IZ7 334 aaKnown RBP21.31■■□□□ 1
SHANK3-203ENST00000445220 A0A1B0GUA9 196 aa21.3■■□□□ 1
SHANK3-203ENST00000445220 SDSP20132 328 aa21.3■■□□□ 1
SHANK3-203ENST00000445220 HDXQ7Z353 690 aa21.3■■□□□ 1
SHANK3-203ENST00000445220 CCDC114Q96M63 670 aa21.3■■□□□ 1
SHANK3-203ENST00000445220 IFIT1P09914 478 aaKnown RBP21.3■■□□□ 1
SHANK3-203ENST00000445220 U2AF2P26368 475 aaKnown RBP eCLIP21.3■■□□□ 1
SHANK3-203ENST00000445220 ARFGAP2Q8N6H7 521 aa21.3■■□□□ 1
SHANK3-203ENST00000445220 MRPS27Q92552 414 aaKnown RBP21.3■■□□□ 1
SHANK3-203ENST00000445220 ATP10BO94823 1461 aa21.3■■□□□ 1
SHANK3-203ENST00000445220 ASXL1Q8IXJ9 1541 aa21.3■■□□□ 1
SHANK3-203ENST00000445220 AKR1B10O60218 316 aa21.3■■□□□ 1
SHANK3-203ENST00000445220 SLC12A7Q9Y666 1083 aa21.3■■□□□ 1
SHANK3-203ENST00000445220 MSH6P52701 1360 aa21.3■■□□□ 1
SHANK3-203ENST00000445220 PAF1Q8N7H5 531 aa21.29■■□□□ 1
SHANK3-203ENST00000445220 KCNG4Q8TDN1 519 aa21.29■■□□□ 1
SHANK3-203ENST00000445220 CTNNBL1Q8WYA6 563 aaPredicted RBP21.29■■□□□ 1
SHANK3-203ENST00000445220 ORC3Q9UBD5 711 aaPredicted RBP21.29■■□□□ 1
SHANK3-203ENST00000445220 POLR3DP05423 398 aaPredicted RBP21.29■■□□□ 1
SHANK3-203ENST00000445220 IFI16Q16666 785 aaKnown RBP21.29■■□□□ 1
SHANK3-203ENST00000445220 PUS7Q96PZ0 661 aaKnown RBP21.29■■□□□ 1
SHANK3-203ENST00000445220 MAPKBP1O60336 1514 aa21.29■■□□□ 1
SHANK3-203ENST00000445220 GOLGA8AA7E2F4 631 aa21.29■■□□□ 1
SHANK3-203ENST00000445220 SPAG1Q07617 926 aa21.29■■□□□ 1
SHANK3-203ENST00000445220 NEK1Q96PY6 1258 aa21.29■■□□□ 1
SHANK3-203ENST00000445220 F6X3S4 739 aa21.29■■□□□ 1
SHANK3-203ENST00000445220 PHACTR2O75167 634 aa21.29■■□□□ 1
SHANK3-203ENST00000445220 NOP2P46087 812 aaKnown RBP21.29■■□□□ 1
SHANK3-203ENST00000445220 USP16Q9Y5T5 823 aa21.29■■□□□ 1
SHANK3-203ENST00000445220 PTPRKQ15262 1439 aa21.29■■□□□ 1
SHANK3-203ENST00000445220 RAB34Q9BZG1 259 aa21.28■■□□□ 1
SHANK3-203ENST00000445220 DNM1Q05193 864 aaKnown RBP21.28■■□□□ 1
SHANK3-203ENST00000445220 PPM1EQ8WY54 764 aa21.28■■□□□ 1
SHANK3-203ENST00000445220 PIK3R4Q99570 1358 aa21.28■■□□□ 1
SHANK3-203ENST00000445220 ZNF213O14771 459 aa21.28■■□□□ 1
SHANK3-203ENST00000445220 CTCFLQ8NI51 663 aaPredicted RBP21.28■■□□□ 1
SHANK3-203ENST00000445220 PRPF4BQ13523 1007 aaKnown RBP21.28■■□□□ 1
SHANK3-203ENST00000445220 RBSNQ9H1K0 784 aa21.28■■□□□ 1
SHANK3-203ENST00000445220 ZNF287Q9HBT7 754 aa21.28■■□□□ 1
SHANK3-203ENST00000445220 FAM76AQ8TAV0 307 aa21.27■■□□□ 1
SHANK3-203ENST00000445220 WDR7Q9Y4E6 1490 aa21.27■■□□□ 1
SHANK3-203ENST00000445220 RIOK3O14730 519 aaKnown RBP21.27■■□□□ 1
SHANK3-203ENST00000445220 USHBP1Q8N6Y0 703 aa21.27■■□□□ 1
SHANK3-203ENST00000445220 SCLT1Q96NL6 688 aa21.27■■□□□ 1
SHANK3-203ENST00000445220 TNRQ92752 1358 aa21.27■■□□□ 1
SHANK3-203ENST00000445220 PTCD1O75127 700 aaKnown RBP21.27■■□□□ 1
SHANK3-203ENST00000445220 CCDC8Q9H0W5 538 aaPredicted RBP21.27■■□□□ 1
SHANK3-203ENST00000445220 TTC21AQ8NDW8 1320 aa21.27■■□□□ 1
SHANK3-203ENST00000445220 MBIPQ9NS73 344 aa21.27■■□□□ 1
SHANK3-203ENST00000445220 PRAG1Q86YV5 1406 aa21.27■□□□□ 0.99
SHANK3-203ENST00000445220 MPRIPQ6WCQ1 1025 aa21.26■□□□□ 0.99
SHANK3-203ENST00000445220 NUP153P49790 1475 aaKnown RBP21.26■□□□□ 0.99
SHANK3-203ENST00000445220 TCOF1Q13428 1488 aaKnown RBP21.26■□□□□ 0.99
SHANK3-203ENST00000445220 TRIM21P19474 475 aaKnown RBP21.26■□□□□ 0.99
SHANK3-203ENST00000445220 IFIT5Q13325 482 aaKnown RBP21.26■□□□□ 0.99
SHANK3-203ENST00000445220 NAPBQ9H115 298 aa21.26■□□□□ 0.99
SHANK3-203ENST00000445220 FOXO3O43524 673 aa21.26■□□□□ 0.99
SHANK3-203ENST00000445220 IARSP41252 1262 aaKnown RBP21.26■□□□□ 0.99
SHANK3-203ENST00000445220 KIAA0753Q2KHM9 967 aa21.26■□□□□ 0.99
SHANK3-203ENST00000445220 EIF4G3O43432 1585 aaKnown RBP21.26■□□□□ 0.99
SHANK3-203ENST00000445220 TACC1O75410 805 aa21.25■□□□□ 0.99
SHANK3-203ENST00000445220 NPHP3Q7Z494 1330 aa21.25■□□□□ 0.99
SHANK3-203ENST00000445220 CCDC96Q2M329 555 aa21.25■□□□□ 0.99
SHANK3-203ENST00000445220 NECAB1Q8N987 351 aa21.25■□□□□ 0.99
SHANK3-203ENST00000445220 AMPD3Q01432 767 aa21.25■□□□□ 0.99
SHANK3-203ENST00000445220 NAA25Q14CX7 972 aa21.25■□□□□ 0.99
SHANK3-203ENST00000445220 CCDC129Q6ZRS4 1044 aa21.25■□□□□ 0.99
SHANK3-203ENST00000445220 MYO1BO43795 1136 aa21.25■□□□□ 0.99
SHANK3-203ENST00000445220 KIF4AO95239 1232 aa21.25■□□□□ 0.99
SHANK3-203ENST00000445220 KIF5BP33176 963 aa21.25■□□□□ 0.99
SHANK3-203ENST00000445220 EVCP57679 992 aa21.25■□□□□ 0.99
SHANK3-203ENST00000445220 ESYT1Q9BSJ8 1104 aa21.25■□□□□ 0.99
SHANK3-203ENST00000445220 TEX13AQ9BXU3 409 aaPredicted RBP21.25■□□□□ 0.99
SHANK3-203ENST00000445220 CPSF2Q9P2I0 782 aaKnown RBP21.25■□□□□ 0.99
SHANK3-203ENST00000445220 ACEP12821 1306 aa21.25■□□□□ 0.99
SHANK3-203ENST00000445220 CCDC40Q4G0X9 1142 aa21.25■□□□□ 0.99
SHANK3-203ENST00000445220 STMN4Q9H169 189 aaPredicted RBP21.25■□□□□ 0.99
SHANK3-203ENST00000445220 CEP83Q9Y592 693 aa21.25■□□□□ 0.99
SHANK3-203ENST00000445220 NCKAP5LQ9HCH0 1330 aa21.24■□□□□ 0.99
SHANK3-203ENST00000445220 ARHGAP30Q7Z6I6 1101 aaPredicted RBP21.24■□□□□ 0.99
SHANK3-203ENST00000445220 INTS4Q96HW7 963 aaKnown RBP21.24■□□□□ 0.99
SHANK3-203ENST00000445220 ZEB2O60315 1214 aa21.24■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms