RNA–Protein interactions for RNA: ENST00000445184.1

LINC01004-201, Transcript of long intergenic non-protein coding RNA 1004, humanhuman

TSL 5 BASIC

Gene LINC01004, Length 686 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01004-201ENST00000445184 ZDHHC13Q8IUH4 622 aa7.79□□□□□ -1.16
LINC01004-201ENST00000445184 DCAF11Q8TEB1 546 aa7.79□□□□□ -1.16
LINC01004-201ENST00000445184 DHX32Q7L7V1 743 aaKnown RBP7.78□□□□□ -1.16
LINC01004-201ENST00000445184 TRIM50Q86XT4 487 aa7.78□□□□□ -1.16
LINC01004-201ENST00000445184 DTX1Q86Y01 620 aa7.78□□□□□ -1.16
LINC01004-201ENST00000445184 NFATC2IPQ8NCF5 419 aa7.78□□□□□ -1.16
LINC01004-201ENST00000445184 TPCN2Q8NHX9 752 aa7.78□□□□□ -1.16
LINC01004-201ENST00000445184 SMG9Q9H0W8 520 aaKnown RBP7.78□□□□□ -1.16
LINC01004-201ENST00000445184 C1orf115Q9H7X2 142 aa7.78□□□□□ -1.16
LINC01004-201ENST00000445184 GDPD2Q9HCC8 539 aa7.78□□□□□ -1.16
LINC01004-201ENST00000445184 DHX15O43143 795 aaKnown RBP7.77□□□□□ -1.17
LINC01004-201ENST00000445184 PPP1R12BO60237 982 aaPredicted RBP7.77□□□□□ -1.17
LINC01004-201ENST00000445184 EPB42P16452 691 aa7.77□□□□□ -1.17
LINC01004-201ENST00000445184 GPLD1P80108 840 aa7.77□□□□□ -1.17
LINC01004-201ENST00000445184 SRA1Q9HD15 236 aaKnown RBP7.77□□□□□ -1.17
LINC01004-201ENST00000445184 ADGRE2Q9UHX3 823 aa7.77□□□□□ -1.17
LINC01004-201ENST00000445184 MLLT1Q03111 559 aaPredicted RBP7.76□□□□□ -1.17
LINC01004-201ENST00000445184 FLIIQ13045 1269 aa7.76□□□□□ -1.17
LINC01004-201ENST00000445184 CCDC102BQ68D86 513 aa7.76□□□□□ -1.17
LINC01004-201ENST00000445184 ZBTB7BO15156 539 aaPredicted RBP7.75□□□□□ -1.17
LINC01004-201ENST00000445184 NFIAQ12857 509 aa7.75□□□□□ -1.17
LINC01004-201ENST00000445184 MAP4K3Q8IVH8 894 aa7.75□□□□□ -1.17
LINC01004-201ENST00000445184 AGGF1Q8N302 714 aaeCLIP7.75□□□□□ -1.17
LINC01004-201ENST00000445184 TGFBR3LH3BV60 316 aa7.74□□□□□ -1.17
LINC01004-201ENST00000445184 M0R2N6 131 aa7.74□□□□□ -1.17
LINC01004-201ENST00000445184 ARID4AP29374 1257 aaPredicted RBP7.74□□□□□ -1.17
LINC01004-201ENST00000445184 ATP1A2P50993 1020 aa7.74□□□□□ -1.17
LINC01004-201ENST00000445184 KRT25Q7Z3Z0 450 aa7.74□□□□□ -1.17
LINC01004-201ENST00000445184 DEPDC4Q8N2C3 294 aa7.74□□□□□ -1.17
LINC01004-201ENST00000445184 STAG2Q8N3U4 1231 aa7.74□□□□□ -1.17
LINC01004-201ENST00000445184 UBL7Q96S82 380 aaPredicted RBP7.74□□□□□ -1.17
LINC01004-201ENST00000445184 ZFATQ9P243 1243 aa7.74□□□□□ -1.17
LINC01004-201ENST00000445184 A6NJR5 290 aa7.73□□□□□ -1.17
LINC01004-201ENST00000445184 USP17L5A8MUK1 530 aa7.73□□□□□ -1.17
LINC01004-201ENST00000445184 TARSP26639 723 aaKnown RBP7.73□□□□□ -1.17
LINC01004-201ENST00000445184 OGFOD2Q6N063 350 aa7.73□□□□□ -1.17
LINC01004-201ENST00000445184 NGLY1Q96IV0 654 aa7.73□□□□□ -1.17
LINC01004-201ENST00000445184 C2orf49Q9BVC5 232 aaPredicted RBP7.73□□□□□ -1.17
LINC01004-201ENST00000445184 RARAP10276 462 aa7.72□□□□□ -1.17
LINC01004-201ENST00000445184 EIF2AK2P19525 551 aaKnown RBP7.72□□□□□ -1.17
LINC01004-201ENST00000445184 HFE2Q6ZVN8 426 aa7.72□□□□□ -1.17
LINC01004-201ENST00000445184 DBNDD2Q9BQY9 259 aa7.72□□□□□ -1.17
LINC01004-201ENST00000445184 C11orf16Q9NQ32 467 aa7.72□□□□□ -1.17
LINC01004-201ENST00000445184 DMGDHQ9UI17 866 aaKnown RBP7.72□□□□□ -1.17
LINC01004-201ENST00000445184 KIAA1024Q9UPX6 916 aa7.72□□□□□ -1.17
LINC01004-201ENST00000445184 ATAD2Q6PL18 1390 aa7.71□□□□□ -1.17
LINC01004-201ENST00000445184 PRR19A6NJB7 356 aa7.71□□□□□ -1.18
LINC01004-201ENST00000445184 C21orf2O43822 256 aa7.71□□□□□ -1.18
LINC01004-201ENST00000445184 UBTFP17480 764 aaKnown RBP7.71□□□□□ -1.18
LINC01004-201ENST00000445184 NRLP54845 237 aa7.71□□□□□ -1.18
LINC01004-201ENST00000445184 SETDB1Q15047 1291 aa7.71□□□□□ -1.18
LINC01004-201ENST00000445184 RNF43Q68DV7 783 aa7.71□□□□□ -1.18
LINC01004-201ENST00000445184 GDF6Q6KF10 455 aaPredicted RBP7.71□□□□□ -1.18
LINC01004-201ENST00000445184 ZC3HAV1Q7Z2W4 902 aaKnown RBP7.71□□□□□ -1.18
LINC01004-201ENST00000445184 ARMC10Q8N2F6 343 aa7.71□□□□□ -1.18
LINC01004-201ENST00000445184 IL22RA1Q8N6P7 574 aa7.71□□□□□ -1.18
LINC01004-201ENST00000445184 IFT43Q96FT9 208 aa7.71□□□□□ -1.18
LINC01004-201ENST00000445184 CEP41Q9BYV8 373 aa7.71□□□□□ -1.18
LINC01004-201ENST00000445184 GRNP28799 593 aaKnown RBP7.7□□□□□ -1.18
LINC01004-201ENST00000445184 RTN1Q16799 776 aa7.7□□□□□ -1.18
LINC01004-201ENST00000445184 UVSSAQ2YD98 709 aa7.7□□□□□ -1.18
LINC01004-201ENST00000445184 GAS2L2Q8NHY3 880 aa7.7□□□□□ -1.18
LINC01004-201ENST00000445184 PLD4Q96BZ4 506 aa7.7□□□□□ -1.18
LINC01004-201ENST00000445184 C7orf69Q9H7B7 122 aa7.7□□□□□ -1.18
LINC01004-201ENST00000445184 SASH3O75995 380 aa7.69□□□□□ -1.18
LINC01004-201ENST00000445184 C8AP07357 584 aa7.69□□□□□ -1.18
LINC01004-201ENST00000445184 CLDN10P78369 228 aa7.69□□□□□ -1.18
LINC01004-201ENST00000445184 TRIM42Q8IWZ5 723 aa7.69□□□□□ -1.18
LINC01004-201ENST00000445184 TSEN2Q8NCE0 465 aaKnown RBP7.69□□□□□ -1.18
LINC01004-201ENST00000445184 UTP4Q969X6 686 aaKnown RBP7.69□□□□□ -1.18
LINC01004-201ENST00000445184 ALG2Q9H553 416 aa7.69□□□□□ -1.18
LINC01004-201ENST00000445184 BCS1LQ9Y276 419 aa7.69□□□□□ -1.18
LINC01004-201ENST00000445184 INPP5BP32019 993 aa7.68□□□□□ -1.18
LINC01004-201ENST00000445184 IDH3AP50213 366 aa7.68□□□□□ -1.18
LINC01004-201ENST00000445184 MCM6Q14566 821 aa7.68□□□□□ -1.18
LINC01004-201ENST00000445184 LARGE2Q8N3Y3 721 aa7.68□□□□□ -1.18
LINC01004-201ENST00000445184 POU5F2Q8N7G0 328 aa7.68□□□□□ -1.18
LINC01004-201ENST00000445184 CHMP7Q8WUX9 453 aaPredicted RBP7.68□□□□□ -1.18
LINC01004-201ENST00000445184 HMX2A2RU54 273 aa7.67□□□□□ -1.18
LINC01004-201ENST00000445184 PALM3A6NDB9 673 aaPredicted RBP7.67□□□□□ -1.18
LINC01004-201ENST00000445184 MUC3BQ9H195 1237 aa7.67□□□□□ -1.18
LINC01004-201ENST00000445184 RBM19Q9Y4C8 960 aaKnown RBP7.67□□□□□ -1.18
LINC01004-201ENST00000445184 LOC102724428A0A0B4J2F2 783 aa7.66□□□□□ -1.18
LINC01004-201ENST00000445184 GHRHP01286 108 aa7.66□□□□□ -1.18
LINC01004-201ENST00000445184 SIK1P57059 783 aa7.66□□□□□ -1.18
LINC01004-201ENST00000445184 ABI1Q8IZP0 508 aa7.66□□□□□ -1.18
LINC01004-201ENST00000445184 OGFOD1Q8N543 542 aa7.66□□□□□ -1.18
LINC01004-201ENST00000445184 SCG3Q8WXD2 468 aaKnown RBP7.66□□□□□ -1.18
LINC01004-201ENST00000445184 ASIC4Q96FT7 647 aa7.66□□□□□ -1.18
LINC01004-201ENST00000445184 TLR7Q9NYK1 1049 aaKnown RBP7.66□□□□□ -1.18
LINC01004-201ENST00000445184 J3QW42 95 aa7.65□□□□□ -1.18
LINC01004-201ENST00000445184 ARSDP51689 593 aa7.65□□□□□ -1.18
LINC01004-201ENST00000445184 CACTIN-AS1Q8N1I8 211 aa7.65□□□□□ -1.18
LINC01004-201ENST00000445184 RBSNQ9H1K0 784 aa7.65□□□□□ -1.18
LINC01004-201ENST00000445184 PLEKHM2Q8IWE5 1019 aa7.64□□□□□ -1.19
LINC01004-201ENST00000445184 SIX5Q8N196 739 aa7.64□□□□□ -1.19
LINC01004-201ENST00000445184 FNBP4Q8N3X1 1017 aaPredicted RBP7.64□□□□□ -1.19
LINC01004-201ENST00000445184 SHKBP1Q8TBC3 707 aa7.64□□□□□ -1.19
LINC01004-201ENST00000445184 FAM46AQ96IP4 442 aaKnown RBP7.64□□□□□ -1.19
LINC01004-201ENST00000445184 MYRFLQ96LU7 910 aa7.64□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms