RNA–Protein interactions for RNA: ENST00000445019.5

GPATCH3-202, Transcript of G-patch domain containing 3, humanhuman

TSL 3

Gene GPATCH3, Length 546 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPATCH3-202ENST00000445019 UTYO14607 1347 aa17.29■□□□□ 0.36
GPATCH3-202ENST00000445019 BBOX1O75936 387 aa17.29■□□□□ 0.36
GPATCH3-202ENST00000445019 TRIM27P14373 513 aa17.29■□□□□ 0.36
GPATCH3-202ENST00000445019 GRAPQ13588 217 aa17.29■□□□□ 0.36
GPATCH3-202ENST00000445019 GRAPLQ8TC17 118 aaPredicted RBP17.29■□□□□ 0.36
GPATCH3-202ENST00000445019 C7orf43Q8WVR3 580 aa17.29■□□□□ 0.36
GPATCH3-202ENST00000445019 RCAN3Q9UKA8 241 aa17.29■□□□□ 0.36
GPATCH3-202ENST00000445019 PPEF1O14829 653 aaPredicted RBP17.28■□□□□ 0.36
GPATCH3-202ENST00000445019 CCDC93Q567U6 631 aa17.28■□□□□ 0.36
GPATCH3-202ENST00000445019 INTS3Q68E01 1043 aaKnown RBP17.28■□□□□ 0.36
GPATCH3-202ENST00000445019 CC2D2BQ6DHV5 1058 aa17.28■□□□□ 0.36
GPATCH3-202ENST00000445019 TMC4Q7Z404 712 aa17.28■□□□□ 0.36
GPATCH3-202ENST00000445019 RTL9Q8NET4 1388 aa17.28■□□□□ 0.36
GPATCH3-202ENST00000445019 CHD4Q14839 1912 aa17.27■□□□□ 0.36
GPATCH3-202ENST00000445019 GRIPAP1Q4V328 841 aa17.27■□□□□ 0.36
GPATCH3-202ENST00000445019 TTLL11Q8NHH1 800 aa17.27■□□□□ 0.36
GPATCH3-202ENST00000445019 TMX4Q9H1E5 349 aaPredicted RBP17.27■□□□□ 0.36
GPATCH3-202ENST00000445019 ZNF219Q9P2Y4 722 aaPredicted RBP17.27■□□□□ 0.36
GPATCH3-202ENST00000445019 NBPF7P0C2Y1 421 aaPredicted RBP17.26■□□□□ 0.35
GPATCH3-202ENST00000445019 RTKN2Q8IZC4 609 aa17.26■□□□□ 0.35
GPATCH3-202ENST00000445019 USP44Q9H0E7 712 aa17.26■□□□□ 0.35
GPATCH3-202ENST00000445019 ATP6V0A2Q9Y487 856 aa17.26■□□□□ 0.35
GPATCH3-202ENST00000445019 UTRNP46939 3433 aa17.25■□□□□ 0.35
GPATCH3-202ENST00000445019 LTBP3Q9NS15 1303 aa17.25■□□□□ 0.35
GPATCH3-202ENST00000445019 FER1L6Q2WGJ9 1857 aa17.25■□□□□ 0.35
GPATCH3-202ENST00000445019 CSF1RP07333 972 aa17.25■□□□□ 0.35
GPATCH3-202ENST00000445019 CDC5LQ99459 802 aaKnown RBP17.25■□□□□ 0.35
GPATCH3-202ENST00000445019 NFKBIEO00221 500 aa17.24■□□□□ 0.35
GPATCH3-202ENST00000445019 RPS8P62241 208 aaKnown RBP17.24■□□□□ 0.35
GPATCH3-202ENST00000445019 FOXO4P98177 505 aa17.24■□□□□ 0.35
GPATCH3-202ENST00000445019 SP8Q8IXZ3 490 aa17.24■□□□□ 0.35
GPATCH3-202ENST00000445019 FTSJ3Q8IY81 847 aaKnown RBP17.24■□□□□ 0.35
GPATCH3-202ENST00000445019 CELF1Q92879 486 aaKnown RBP17.24■□□□□ 0.35
GPATCH3-202ENST00000445019 CLUAP1Q96AJ1 413 aa17.24■□□□□ 0.35
GPATCH3-202ENST00000445019 CCDC85AQ96PX6 553 aaPredicted RBP17.24■□□□□ 0.35
GPATCH3-202ENST00000445019 TAOK3Q9H2K8 898 aa17.24■□□□□ 0.35
GPATCH3-202ENST00000445019 GREM2Q9H772 168 aa17.24■□□□□ 0.35
GPATCH3-202ENST00000445019 SEC31BQ9NQW1 1179 aa17.24■□□□□ 0.35
GPATCH3-202ENST00000445019 HDAC5Q9UQL6 1122 aa17.24■□□□□ 0.35
GPATCH3-202ENST00000445019 SNED1Q8TER0 1413 aa17.23■□□□□ 0.35
GPATCH3-202ENST00000445019 MS4A1P11836 297 aa17.23■□□□□ 0.35
GPATCH3-202ENST00000445019 DZIP1LQ8IYY4 767 aaKnown RBP17.23■□□□□ 0.35
GPATCH3-202ENST00000445019 SUCLG2Q96I99 432 aa17.23■□□□□ 0.35
GPATCH3-202ENST00000445019 TAF1P21675 1872 aa17.22■□□□□ 0.35
GPATCH3-202ENST00000445019 LRRC37AA6NMS7 1700 aa17.22■□□□□ 0.35
GPATCH3-202ENST00000445019 UBTFL1P0CB47 393 aaPredicted RBP17.22■□□□□ 0.35
GPATCH3-202ENST00000445019 FKBP4Q02790 459 aaKnown RBP eCLIP17.22■□□□□ 0.35
GPATCH3-202ENST00000445019 FAM161AQ3B820 660 aa17.22■□□□□ 0.35
GPATCH3-202ENST00000445019 OLFM4Q6UX06 510 aa17.22■□□□□ 0.35
GPATCH3-202ENST00000445019 ANKRD18AQ8IVF6 992 aa17.22■□□□□ 0.35
GPATCH3-202ENST00000445019 TNNQ9UQP3 1299 aa17.22■□□□□ 0.35
GPATCH3-202ENST00000445019 COL4A1P02462 1669 aa17.21■□□□□ 0.35
GPATCH3-202ENST00000445019 LMNB1P20700 586 aa17.21■□□□□ 0.35
GPATCH3-202ENST00000445019 ITGA6P23229 1130 aa17.21■□□□□ 0.35
GPATCH3-202ENST00000445019 RASSF7Q02833 373 aa17.21■□□□□ 0.35
GPATCH3-202ENST00000445019 EPHA10Q5JZY3 1008 aa17.21■□□□□ 0.35
GPATCH3-202ENST00000445019 LMBR1LQ6UX01 489 aa17.21■□□□□ 0.35
GPATCH3-202ENST00000445019 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.21■□□□□ 0.35
GPATCH3-202ENST00000445019 KAZALD1Q96I82 304 aa17.21■□□□□ 0.35
GPATCH3-202ENST00000445019 PSMD1Q99460 953 aa17.21■□□□□ 0.35
GPATCH3-202ENST00000445019 ANKRD18BA2A2Z9 1011 aa17.2■□□□□ 0.34
GPATCH3-202ENST00000445019 GNAI3P08754 354 aa17.2■□□□□ 0.34
GPATCH3-202ENST00000445019 IFIT5Q13325 482 aaKnown RBP17.2■□□□□ 0.34
GPATCH3-202ENST00000445019 RABL6Q3YEC7 729 aaPredicted RBP17.2■□□□□ 0.34
GPATCH3-202ENST00000445019 TMEM57Q8N5G2 664 aa17.2■□□□□ 0.34
GPATCH3-202ENST00000445019 BICC1Q9H694 974 aaKnown RBP17.2■□□□□ 0.34
GPATCH3-202ENST00000445019 CHMP3Q9Y3E7 222 aa17.2■□□□□ 0.34
GPATCH3-202ENST00000445019 SBF1O95248 1867 aa17.2■□□□□ 0.34
GPATCH3-202ENST00000445019 YY1P25490 414 aa17.19■□□□□ 0.34
GPATCH3-202ENST00000445019 IGHMBP2P38935 993 aaKnown RBP17.19■□□□□ 0.34
GPATCH3-202ENST00000445019 C9orf131Q5VYM1 1079 aa17.19■□□□□ 0.34
GPATCH3-202ENST00000445019 MPNDQ8N594 471 aa17.19■□□□□ 0.34
GPATCH3-202ENST00000445019 MEIS3Q99687 375 aa17.19■□□□□ 0.34
GPATCH3-202ENST00000445019 BSDC1Q9NW68 430 aaPredicted RBP17.19■□□□□ 0.34
GPATCH3-202ENST00000445019 RNF181Q9P0P0 153 aa17.19■□□□□ 0.34
GPATCH3-202ENST00000445019 RLBP1P12271 317 aa17.18■□□□□ 0.34
GPATCH3-202ENST00000445019 CCDC57Q2TAC2 916 aa17.18■□□□□ 0.34
GPATCH3-202ENST00000445019 DPP8Q6V1X1 898 aaPredicted RBP17.18■□□□□ 0.34
GPATCH3-202ENST00000445019 ANKRD44Q8N8A2 993 aa17.18■□□□□ 0.34
GPATCH3-202ENST00000445019 SUPT20HQ8NEM7 779 aa17.18■□□□□ 0.34
GPATCH3-202ENST00000445019 RTFDC1Q9BY42 306 aaPredicted RBP17.18■□□□□ 0.34
GPATCH3-202ENST00000445019 ZC3H4Q9UPT8 1303 aaKnown RBP17.18■□□□□ 0.34
GPATCH3-202ENST00000445019 PRELPP51888 382 aa17.17■□□□□ 0.34
GPATCH3-202ENST00000445019 SLC51AQ86UW1 340 aa17.17■□□□□ 0.34
GPATCH3-202ENST00000445019 ITPRIPQ8IWB1 547 aa17.17■□□□□ 0.34
GPATCH3-202ENST00000445019 MPHOSPH8Q99549 860 aa17.17■□□□□ 0.34
GPATCH3-202ENST00000445019 VPS33BQ9H267 617 aa17.17■□□□□ 0.34
GPATCH3-202ENST00000445019 NSFL1CQ9UNZ2 370 aaKnown RBP17.16■□□□□ 0.34
GPATCH3-202ENST00000445019 LRRFIP2Q9Y608 721 aaKnown RBP17.16■□□□□ 0.34
GPATCH3-202ENST00000445019 SPEF2Q9C093 1822 aa17.15■□□□□ 0.34
GPATCH3-202ENST00000445019 IARSP41252 1262 aaKnown RBP17.15■□□□□ 0.34
GPATCH3-202ENST00000445019 PDE3AQ14432 1141 aa17.15■□□□□ 0.34
GPATCH3-202ENST00000445019 TAF7LQ5H9L4 462 aa17.15■□□□□ 0.34
GPATCH3-202ENST00000445019 PANK1Q8TE04 598 aa17.15■□□□□ 0.34
GPATCH3-202ENST00000445019 ZNF277Q9NRM2 450 aaPredicted RBP17.15■□□□□ 0.34
GPATCH3-202ENST00000445019 PODXL2Q9NZ53 605 aa17.15■□□□□ 0.34
GPATCH3-202ENST00000445019 CCDC88AQ3V6T2 1871 aa17.15■□□□□ 0.34
GPATCH3-202ENST00000445019 DICER1Q9UPY3 1922 aaKnown RBP17.15■□□□□ 0.34
GPATCH3-202ENST00000445019 LTBP1Q14766 1721 aa17.15■□□□□ 0.34
GPATCH3-202ENST00000445019 XDHP47989 1333 aa17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms