RNA–Protein interactions for RNA: ENST00000444942.1

LINC00642-203, long intergenic non-protein coding RNA 642, humanhuman

TSL 1 (best)

Gene LINC00642, Length 1,376 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00642-203ENST00000444942 C2orf69Q8N8R5 385 aa12.1□□□□□ -0.47
LINC00642-203ENST00000444942 TBC1D2BQ9UPU7 963 aa12.1□□□□□ -0.47
LINC00642-203ENST00000444942 CEMIPQ8WUJ3 1361 aa12.1□□□□□ -0.47
LINC00642-203ENST00000444942 H0YGN5 161 aa12.09□□□□□ -0.47
LINC00642-203ENST00000444942 APAF1O14727 1248 aa12.09□□□□□ -0.47
LINC00642-203ENST00000444942 TBC1D8O95759 1140 aa12.09□□□□□ -0.47
LINC00642-203ENST00000444942 ALDH1B1P30837 517 aa12.09□□□□□ -0.47
LINC00642-203ENST00000444942 DLK2Q6UY11 383 aa12.09□□□□□ -0.47
LINC00642-203ENST00000444942 LAS1LQ9Y4W2 734 aaKnown RBP12.09□□□□□ -0.47
LINC00642-203ENST00000444942 CDHR2Q9BYE9 1310 aa12.09□□□□□ -0.47
LINC00642-203ENST00000444942 KDM3BQ7LBC6 1761 aa12.08□□□□□ -0.48
LINC00642-203ENST00000444942 GPR25O00155 361 aa12.08□□□□□ -0.48
LINC00642-203ENST00000444942 HTATSF1O43719 755 aaKnown RBP12.08□□□□□ -0.48
LINC00642-203ENST00000444942 GMPSP49915 693 aaPredicted RBP12.08□□□□□ -0.48
LINC00642-203ENST00000444942 CC2D2BQ6DHV5 1058 aa12.08□□□□□ -0.48
LINC00642-203ENST00000444942 ZNF790Q6PG37 636 aa12.08□□□□□ -0.48
LINC00642-203ENST00000444942 CHRDL2Q6WN34 429 aa12.08□□□□□ -0.48
LINC00642-203ENST00000444942 NIM1KQ8IY84 436 aa12.08□□□□□ -0.48
LINC00642-203ENST00000444942 TRPM4Q8TD43 1214 aa12.08□□□□□ -0.48
LINC00642-203ENST00000444942 PNISRQ8TF01 805 aaKnown RBP12.08□□□□□ -0.48
LINC00642-203ENST00000444942 ZNF496Q96IT1 587 aaPredicted RBP12.08□□□□□ -0.48
LINC00642-203ENST00000444942 COL25A1Q9BXS0 654 aaPredicted RBP12.08□□□□□ -0.48
LINC00642-203ENST00000444942 SALL2Q9Y467 1007 aaPredicted RBP12.08□□□□□ -0.48
LINC00642-203ENST00000444942 EN2P19622 333 aaPredicted RBP12.07□□□□□ -0.48
LINC00642-203ENST00000444942 TAF7Q15545 349 aaPredicted RBP12.07□□□□□ -0.48
LINC00642-203ENST00000444942 RBM27Q9P2N5 1060 aaKnown RBP12.07□□□□□ -0.48
LINC00642-203ENST00000444942 PRAMEF22A3QJZ6 481 aa12.06□□□□□ -0.48
LINC00642-203ENST00000444942 CAMTA2O94983 1202 aa12.06□□□□□ -0.48
LINC00642-203ENST00000444942 STARD3NLO95772 234 aa12.06□□□□□ -0.48
LINC00642-203ENST00000444942 NBPF5PQ86XG9 351 aaPredicted RBP12.06□□□□□ -0.48
LINC00642-203ENST00000444942 RASAL3Q86YV0 1011 aa12.06□□□□□ -0.48
LINC00642-203ENST00000444942 CXCL9Q07325 125 aa12.05□□□□□ -0.48
LINC00642-203ENST00000444942 LMOD3Q0VAK6 560 aa12.05□□□□□ -0.48
LINC00642-203ENST00000444942 GRIPAP1Q4V328 841 aa12.05□□□□□ -0.48
LINC00642-203ENST00000444942 FMNL2Q96PY5 1086 aa12.05□□□□□ -0.48
LINC00642-203ENST00000444942 TRIM35Q9UPQ4 493 aa12.05□□□□□ -0.48
LINC00642-203ENST00000444942 ZNF330Q9Y3S2 320 aaPredicted RBP12.05□□□□□ -0.48
LINC00642-203ENST00000444942 LAMA3Q16787 3333 aa12.05□□□□□ -0.48
LINC00642-203ENST00000444942 HEG1Q9ULI3 1381 aa12.05□□□□□ -0.48
LINC00642-203ENST00000444942 FKTNO75072 461 aa12.05□□□□□ -0.48
LINC00642-203ENST00000444942 IL6STP40189 918 aaPredicted RBP12.05□□□□□ -0.48
LINC00642-203ENST00000444942 PIP4K2AP48426 406 aaPredicted RBP12.05□□□□□ -0.48
LINC00642-203ENST00000444942 TSPYL4Q9UJ04 414 aa12.05□□□□□ -0.48
LINC00642-203ENST00000444942 HNRNPUQ00839 825 aaKnown RBP eCLIP12.04□□□□□ -0.48
LINC00642-203ENST00000444942 KRT26Q7Z3Y9 468 aa12.04□□□□□ -0.48
LINC00642-203ENST00000444942 LAMB4A4D0S4 1761 aa12.03□□□□□ -0.48
LINC00642-203ENST00000444942 PPIP5K2O43314 1243 aa12.03□□□□□ -0.48
LINC00642-203ENST00000444942 BCL2L13Q9BXK5 485 aa12.03□□□□□ -0.48
LINC00642-203ENST00000444942 ZNRF3Q9ULT6 936 aa12.03□□□□□ -0.48
LINC00642-203ENST00000444942 USP16Q9Y5T5 823 aa12.03□□□□□ -0.48
LINC00642-203ENST00000444942 VCANP13611 3396 aa12.02□□□□□ -0.49
LINC00642-203ENST00000444942 A1BGP04217 495 aa12.02□□□□□ -0.49
LINC00642-203ENST00000444942 AOC3Q16853 763 aa12.02□□□□□ -0.49
LINC00642-203ENST00000444942 TPTE2Q6XPS3 522 aa12.02□□□□□ -0.49
LINC00642-203ENST00000444942 CFHR5Q9BXR6 569 aa12.02□□□□□ -0.49
LINC00642-203ENST00000444942 VPS33BQ9H267 617 aa12.02□□□□□ -0.49
LINC00642-203ENST00000444942 PRO3102Q9H379 93 aa12.02□□□□□ -0.49
LINC00642-203ENST00000444942 CNOT7Q9UIV1 285 aaKnown RBP12.02□□□□□ -0.49
LINC00642-203ENST00000444942 SHTN1A0MZ66 631 aa12.01□□□□□ -0.49
LINC00642-203ENST00000444942 ADM5C9JUS6 153 aa12.01□□□□□ -0.49
LINC00642-203ENST00000444942 H7C1D1 291 aa12.01□□□□□ -0.49
LINC00642-203ENST00000444942 TM4SF4P48230 202 aa12.01□□□□□ -0.49
LINC00642-203ENST00000444942 CRY2Q49AN0 593 aa12.01□□□□□ -0.49
LINC00642-203ENST00000444942 ARMC5Q96C12 935 aa12.01□□□□□ -0.49
LINC00642-203ENST00000444942 TRIM17Q9Y577 477 aa12.01□□□□□ -0.49
LINC00642-203ENST00000444942 SPTBN5Q9NRC6 3674 aaKnown RBP12.01□□□□□ -0.49
LINC00642-203ENST00000444942 SNRPA1P09661 255 aaKnown RBP12□□□□□ -0.49
LINC00642-203ENST00000444942 EIF4A1P60842 406 aaKnown RBP12□□□□□ -0.49
LINC00642-203ENST00000444942 KRT24Q2M2I5 525 aa12□□□□□ -0.49
LINC00642-203ENST00000444942 CLEC4GQ6UXB4 293 aa12□□□□□ -0.49
LINC00642-203ENST00000444942 OTOP1Q7RTM1 612 aa12□□□□□ -0.49
LINC00642-203ENST00000444942 NECTIN2Q92692 538 aa12□□□□□ -0.49
LINC00642-203ENST00000444942 TNIP1Q15025 636 aa11.99□□□□□ -0.49
LINC00642-203ENST00000444942 NPM2Q86SE8 214 aaKnown RBP11.99□□□□□ -0.49
LINC00642-203ENST00000444942 DZIP3Q86Y13 1208 aaKnown RBP11.99□□□□□ -0.49
LINC00642-203ENST00000444942 MICALL2Q8IY33 904 aa11.99□□□□□ -0.49
LINC00642-203ENST00000444942 NGEFQ8N5V2 710 aa11.99□□□□□ -0.49
LINC00642-203ENST00000444942 DCPSQ96C86 337 aaKnown RBP11.99□□□□□ -0.49
LINC00642-203ENST00000444942 TEX13AQ9BXU3 409 aaPredicted RBP11.99□□□□□ -0.49
LINC00642-203ENST00000444942 R3HDMLQ9H3Y0 253 aa11.99□□□□□ -0.49
LINC00642-203ENST00000444942 PRDM6Q9NQX0 595 aa11.99□□□□□ -0.49
LINC00642-203ENST00000444942 EIF2S2P20042 333 aaKnown RBP11.98□□□□□ -0.49
LINC00642-203ENST00000444942 SLC51AQ86UW1 340 aa11.98□□□□□ -0.49
LINC00642-203ENST00000444942 TMEM106CQ9BVX2 250 aa11.98□□□□□ -0.49
LINC00642-203ENST00000444942 RIC1Q4ADV7 1423 aa11.97□□□□□ -0.49
LINC00642-203ENST00000444942 SOX1O00570 391 aaPredicted RBP11.97□□□□□ -0.49
LINC00642-203ENST00000444942 RAD17O75943 681 aa11.97□□□□□ -0.49
LINC00642-203ENST00000444942 HOXA10P31260 410 aaPredicted RBP11.97□□□□□ -0.49
LINC00642-203ENST00000444942 SAMD7Q7Z3H4 446 aa11.97□□□□□ -0.49
LINC00642-203ENST00000444942 MBIPQ9NS73 344 aa11.97□□□□□ -0.49
LINC00642-203ENST00000444942 ZNF652Q9Y2D9 606 aa11.97□□□□□ -0.49
LINC00642-203ENST00000444942 PTPN22Q9Y2R2 807 aa11.97□□□□□ -0.49
LINC00642-203ENST00000444942 ZBED9Q6R2W3 1325 aa11.97□□□□□ -0.49
LINC00642-203ENST00000444942 A0A1W2PPC1 479 aa11.96□□□□□ -0.49
LINC00642-203ENST00000444942 CHL1O00533 1208 aa11.96□□□□□ -0.49
LINC00642-203ENST00000444942 MYL6BP14649 208 aa11.96□□□□□ -0.49
LINC00642-203ENST00000444942 FKBP1BP68106 108 aa11.96□□□□□ -0.49
LINC00642-203ENST00000444942 WWC1Q8IX03 1113 aa11.96□□□□□ -0.49
LINC00642-203ENST00000444942 CDCA5Q96FF9 252 aa11.96□□□□□ -0.49
LINC00642-203ENST00000444942 LRCH3Q96II8 777 aa11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms