RNA–Protein interactions for RNA: ENST00000444609.1

HDAC8-215, Transcript of histone deacetylase 8, humanhuman

TSL 3

Gene HDAC8, Length 607 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-215ENST00000444609 SULF1Q8IWU6 871 aa14.03□□□□□ -0.16
HDAC8-215ENST00000444609 SUPT20HQ8NEM7 779 aa14.03□□□□□ -0.16
HDAC8-215ENST00000444609 RPGRQ92834 1020 aaKnown RBP14.03□□□□□ -0.16
HDAC8-215ENST00000444609 ZBTB12Q9Y330 459 aaPredicted RBP14.03□□□□□ -0.16
HDAC8-215ENST00000444609 RBBP6Q7Z6E9 1792 aaKnown RBP14.03□□□□□ -0.16
HDAC8-215ENST00000444609 PRAMEF22A3QJZ6 481 aa14.02□□□□□ -0.17
HDAC8-215ENST00000444609 KIAA2012Q0VF49 1180 aa14.02□□□□□ -0.17
HDAC8-215ENST00000444609 LRCH3Q96II8 777 aa14.02□□□□□ -0.17
HDAC8-215ENST00000444609 STXBP5LQ9Y2K9 1186 aa14.02□□□□□ -0.17
HDAC8-215ENST00000444609 YDJCA8MPS7 323 aa14.01□□□□□ -0.17
HDAC8-215ENST00000444609 RBM26Q5T8P6 1007 aaKnown RBP14.01□□□□□ -0.17
HDAC8-215ENST00000444609 RBM17Q96I25 401 aaKnown RBP14.01□□□□□ -0.17
HDAC8-215ENST00000444609 ZNF333Q96JL9 665 aa14.01□□□□□ -0.17
HDAC8-215ENST00000444609 TMX4Q9H1E5 349 aaPredicted RBP14.01□□□□□ -0.17
HDAC8-215ENST00000444609 ATP6V0A2Q9Y487 856 aa14.01□□□□□ -0.17
HDAC8-215ENST00000444609 A0A1W2PPC1 479 aa14□□□□□ -0.17
HDAC8-215ENST00000444609 SREBF2Q12772 1141 aa14□□□□□ -0.17
HDAC8-215ENST00000444609 ZNF790Q6PG37 636 aa14□□□□□ -0.17
HDAC8-215ENST00000444609 MOB2Q70IA6 237 aa14□□□□□ -0.17
HDAC8-215ENST00000444609 UNC80Q8N2C7 3258 aa14□□□□□ -0.17
HDAC8-215ENST00000444609 ABCC12Q96J65 1359 aa13.99□□□□□ -0.17
HDAC8-215ENST00000444609 UBE2Q2LH0YL09 131 aa13.99□□□□□ -0.17
HDAC8-215ENST00000444609 ANKRD13DQ6ZTN6 518 aa13.99□□□□□ -0.17
HDAC8-215ENST00000444609 NUTM1Q86Y26 1132 aa13.99□□□□□ -0.17
HDAC8-215ENST00000444609 DPF3Q92784 378 aa13.99□□□□□ -0.17
HDAC8-215ENST00000444609 GGA3Q9NZ52 723 aa13.99□□□□□ -0.17
HDAC8-215ENST00000444609 RIC1Q4ADV7 1423 aa13.98□□□□□ -0.17
HDAC8-215ENST00000444609 ALDH1A1P00352 501 aa13.98□□□□□ -0.17
HDAC8-215ENST00000444609 PIP4K2AP48426 406 aaPredicted RBP13.98□□□□□ -0.17
HDAC8-215ENST00000444609 PHF6Q8IWS0 365 aaKnown RBP eCLIP13.98□□□□□ -0.17
HDAC8-215ENST00000444609 ASTN2O75129 1339 aaPredicted RBP13.97□□□□□ -0.17
HDAC8-215ENST00000444609 UBR2Q8IWV8 1755 aa13.97□□□□□ -0.17
HDAC8-215ENST00000444609 MKRN3Q13064 507 aaKnown RBP13.97□□□□□ -0.17
HDAC8-215ENST00000444609 SLC4A8Q2Y0W8 1093 aa13.97□□□□□ -0.17
HDAC8-215ENST00000444609 GPR153Q6NV75 609 aa13.97□□□□□ -0.17
HDAC8-215ENST00000444609 ERO1AQ96HE7 468 aa13.97□□□□□ -0.17
HDAC8-215ENST00000444609 FMNL2Q96PY5 1086 aa13.97□□□□□ -0.17
HDAC8-215ENST00000444609 NYXQ9GZU5 481 aa13.97□□□□□ -0.17
HDAC8-215ENST00000444609 LAMA3Q16787 3333 aa13.97□□□□□ -0.17
HDAC8-215ENST00000444609 ERBB4Q15303 1308 aa13.96□□□□□ -0.17
HDAC8-215ENST00000444609 WTIPA6NIX2 430 aaPredicted RBP13.96□□□□□ -0.17
HDAC8-215ENST00000444609 PSMD14O00487 310 aa13.96□□□□□ -0.17
HDAC8-215ENST00000444609 HLFQ16534 295 aa13.96□□□□□ -0.17
HDAC8-215ENST00000444609 KIF4BQ2VIQ3 1234 aa13.96□□□□□ -0.17
HDAC8-215ENST00000444609 DPP8Q6V1X1 898 aaPredicted RBP13.96□□□□□ -0.17
HDAC8-215ENST00000444609 EFCC1Q9HA90 598 aa13.96□□□□□ -0.17
HDAC8-215ENST00000444609 USP16Q9Y5T5 823 aa13.96□□□□□ -0.17
HDAC8-215ENST00000444609 COL9A1P20849 921 aa13.95□□□□□ -0.18
HDAC8-215ENST00000444609 RPS12P25398 132 aaKnown RBP13.95□□□□□ -0.18
HDAC8-215ENST00000444609 NBPF11Q86T75 865 aa13.95□□□□□ -0.18
HDAC8-215ENST00000444609 DEFB123Q8N688 67 aa13.95□□□□□ -0.18
HDAC8-215ENST00000444609 MTHFSDQ2M296 383 aaKnown RBP13.94□□□□□ -0.18
HDAC8-215ENST00000444609 CDCA8Q53HL2 280 aa13.94□□□□□ -0.18
HDAC8-215ENST00000444609 MPNDQ8N594 471 aa13.94□□□□□ -0.18
HDAC8-215ENST00000444609 CD99L2Q8TCZ2 262 aa13.94□□□□□ -0.18
HDAC8-215ENST00000444609 VCANP13611 3396 aa13.93□□□□□ -0.18
HDAC8-215ENST00000444609 IL13P35225 146 aa13.93□□□□□ -0.18
HDAC8-215ENST00000444609 ANGEL2Q5VTE6 544 aaKnown RBP13.93□□□□□ -0.18
HDAC8-215ENST00000444609 C3orf67Q6ZVT6 689 aa13.93□□□□□ -0.18
HDAC8-215ENST00000444609 SP8Q8IXZ3 490 aa13.93□□□□□ -0.18
HDAC8-215ENST00000444609 ZNF609O15014 1411 aa13.92□□□□□ -0.18
HDAC8-215ENST00000444609 INHBEP58166 350 aa13.92□□□□□ -0.18
HDAC8-215ENST00000444609 CAP1Q01518 475 aa13.92□□□□□ -0.18
HDAC8-215ENST00000444609 MTMR10Q9NXD2 777 aa13.92□□□□□ -0.18
HDAC8-215ENST00000444609 POLR2AP24928 1970 aaKnown RBP13.91□□□□□ -0.18
HDAC8-215ENST00000444609 ZBTB7BO15156 539 aaPredicted RBP13.91□□□□□ -0.18
HDAC8-215ENST00000444609 SCARF1Q14162 830 aa13.91□□□□□ -0.18
HDAC8-215ENST00000444609 SLC9C1Q4G0N8 1177 aa13.91□□□□□ -0.18
HDAC8-215ENST00000444609 Q7L0L9 218 aa13.91□□□□□ -0.18
HDAC8-215ENST00000444609 IFNL1Q8IU54 200 aa13.91□□□□□ -0.18
HDAC8-215ENST00000444609 NR2E3Q9Y5X4 410 aa13.91□□□□□ -0.18
HDAC8-215ENST00000444609 SPTBN5Q9NRC6 3674 aaKnown RBP13.91□□□□□ -0.18
HDAC8-215ENST00000444609 NBPF26B4DH59 902 aa13.9□□□□□ -0.18
HDAC8-215ENST00000444609 BBOX1O75936 387 aa13.9□□□□□ -0.18
HDAC8-215ENST00000444609 TEFQ10587 303 aa13.9□□□□□ -0.18
HDAC8-215ENST00000444609 SPRYD7Q5W111 196 aa13.9□□□□□ -0.18
HDAC8-215ENST00000444609 NBPF10Q6P3W6 841 aaKnown RBP13.9□□□□□ -0.18
HDAC8-215ENST00000444609 IL17REQ8NFR9 667 aa13.9□□□□□ -0.18
HDAC8-215ENST00000444609 KCNQ3O43525 872 aa13.89□□□□□ -0.19
HDAC8-215ENST00000444609 MYCP01106 439 aaPredicted RBP13.89□□□□□ -0.19
HDAC8-215ENST00000444609 TCIRG1Q13488 830 aa13.89□□□□□ -0.19
HDAC8-215ENST00000444609 TTLL12Q14166 644 aaPredicted RBP13.89□□□□□ -0.19
HDAC8-215ENST00000444609 HTATIP2Q9BUP3 242 aa13.89□□□□□ -0.19
HDAC8-215ENST00000444609 KCNQ5Q9NR82 932 aa13.89□□□□□ -0.19
HDAC8-215ENST00000444609 ABCC4O15439 1325 aa13.89□□□□□ -0.19
HDAC8-215ENST00000444609 MANSC4A6NHS7 340 aaPredicted RBP13.88□□□□□ -0.19
HDAC8-215ENST00000444609 PLA2G5P39877 138 aa13.88□□□□□ -0.19
HDAC8-215ENST00000444609 SP3Q02447 781 aa13.88□□□□□ -0.19
HDAC8-215ENST00000444609 PTPN12Q05209 780 aaKnown RBP13.88□□□□□ -0.19
HDAC8-215ENST00000444609 PRAMEF18Q5VWM3 479 aa13.88□□□□□ -0.19
HDAC8-215ENST00000444609 NLRP3Q96P20 1036 aa13.88□□□□□ -0.19
HDAC8-215ENST00000444609 PTCH2Q9Y6C5 1203 aa13.88□□□□□ -0.19
HDAC8-215ENST00000444609 RTL9Q8NET4 1388 aa13.87□□□□□ -0.19
HDAC8-215ENST00000444609 IBTKQ9P2D0 1353 aaPredicted RBP13.87□□□□□ -0.19
HDAC8-215ENST00000444609 IGF2BP3O00425 579 aaKnown RBP eCLIP13.87□□□□□ -0.19
HDAC8-215ENST00000444609 ZNF280AP59817 542 aaPredicted RBP13.87□□□□□ -0.19
HDAC8-215ENST00000444609 SUSD4Q5VX71 490 aa13.87□□□□□ -0.19
HDAC8-215ENST00000444609 UBE2Q1Q7Z7E8 422 aa13.87□□□□□ -0.19
HDAC8-215ENST00000444609 SHISA4Q96DD7 197 aa13.87□□□□□ -0.19
HDAC8-215ENST00000444609 DBNDD1Q9H9R9 158 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms