RNA–Protein interactions for RNA: ENST00000443816.5

FN1-211, Transcript of fibronectin 1, humanhuman

TSL 1 (best) BASIC

Gene FN1, Length 7,762 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-211ENST00000443816 SLC4A8Q2Y0W8 1093 aa12.93□□□□□ -0.34
FN1-211ENST00000443816 XAGE3Q8WTP9 111 aa12.93□□□□□ -0.34
FN1-211ENST00000443816 CCDC172P0C7W6 258 aa12.92□□□□□ -0.34
FN1-211ENST00000443816 CTNNA2P26232 953 aa12.92□□□□□ -0.34
FN1-211ENST00000443816 CCT2P78371 535 aaKnown RBP12.92□□□□□ -0.34
FN1-211ENST00000443816 MBIPQ9NS73 344 aa12.92□□□□□ -0.34
FN1-211ENST00000443816 TAX1BP1Q86VP1 789 aa12.92□□□□□ -0.34
FN1-211ENST00000443816 HOOK3Q86VS8 718 aa12.92□□□□□ -0.34
FN1-211ENST00000443816 BTG4Q9NY30 223 aa12.92□□□□□ -0.34
FN1-211ENST00000443816 MAGEB6P1A0A0J9YX57 407 aa12.91□□□□□ -0.34
FN1-211ENST00000443816 DCAF5Q96JK2 942 aa12.91□□□□□ -0.34
FN1-211ENST00000443816 TBCAO75347 108 aaKnown RBP12.91□□□□□ -0.34
FN1-211ENST00000443816 IL15P40933 162 aaPredicted RBP12.91□□□□□ -0.34
FN1-211ENST00000443816 COPS6Q7L5N1 327 aa12.91□□□□□ -0.34
FN1-211ENST00000443816 GIGYF2Q6Y7W6 1299 aaKnown RBP12.91□□□□□ -0.34
FN1-211ENST00000443816 CCDC144CPQ8IYA2 1237 aa12.91□□□□□ -0.34
FN1-211ENST00000443816 HOOK2Q96ED9 719 aa12.91□□□□□ -0.34
FN1-211ENST00000443816 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.91□□□□□ -0.34
FN1-211ENST00000443816 YTHDC2Q9H6S0 1430 aaKnown RBP12.91□□□□□ -0.34
FN1-211ENST00000443816 USO1O60763 962 aaKnown RBP12.91□□□□□ -0.34
FN1-211ENST00000443816 PLXNC1O60486 1568 aa12.91□□□□□ -0.34
FN1-211ENST00000443816 PICALMQ13492 652 aa12.91□□□□□ -0.34
FN1-211ENST00000443816 BEGAINQ9BUH8 593 aa12.91□□□□□ -0.34
FN1-211ENST00000443816 SLC4A4Q9Y6R1 1079 aa12.91□□□□□ -0.34
FN1-211ENST00000443816 BMP15O95972 392 aa12.91□□□□□ -0.34
FN1-211ENST00000443816 MICU3Q86XE3 530 aa12.91□□□□□ -0.34
FN1-211ENST00000443816 NEK1Q96PY6 1258 aa12.91□□□□□ -0.34
FN1-211ENST00000443816 MAP3K5Q99683 1374 aa12.91□□□□□ -0.34
FN1-211ENST00000443816 SPDYE3A6NKU9 549 aa12.9□□□□□ -0.34
FN1-211ENST00000443816 STX6O43752 255 aa12.9□□□□□ -0.34
FN1-211ENST00000443816 NFATC2IPQ8NCF5 419 aa12.9□□□□□ -0.34
FN1-211ENST00000443816 GUCY1B3Q02153 619 aa12.9□□□□□ -0.34
FN1-211ENST00000443816 PICK1Q9NRD5 415 aa12.9□□□□□ -0.34
FN1-211ENST00000443816 USP16Q9Y5T5 823 aa12.9□□□□□ -0.34
FN1-211ENST00000443816 PRKCSHP14314 528 aaPredicted RBP12.9□□□□□ -0.34
FN1-211ENST00000443816 MCM3P25205 808 aa12.9□□□□□ -0.34
FN1-211ENST00000443816 TAOK3Q9H2K8 898 aa12.9□□□□□ -0.34
FN1-211ENST00000443816 ARHGEF10O15013 1369 aa12.9□□□□□ -0.34
FN1-211ENST00000443816 CCDC183Q5T5S1 534 aa12.9□□□□□ -0.34
FN1-211ENST00000443816 TRIM27P14373 513 aa12.9□□□□□ -0.34
FN1-211ENST00000443816 APBB1IPQ7Z5R6 666 aaPredicted RBP12.9□□□□□ -0.34
FN1-211ENST00000443816 SLC26A6Q9BXS9 759 aa12.9□□□□□ -0.34
FN1-211ENST00000443816 NUP153P49790 1475 aaKnown RBP12.9□□□□□ -0.34
FN1-211ENST00000443816 KSR2Q6VAB6 950 aa12.9□□□□□ -0.35
FN1-211ENST00000443816 TBC1D5Q92609 795 aa12.9□□□□□ -0.35
FN1-211ENST00000443816 PABPN1LA6NDY0 278 aaKnown RBP12.89□□□□□ -0.35
FN1-211ENST00000443816 GNPATO15228 680 aa12.89□□□□□ -0.35
FN1-211ENST00000443816 BACH2Q9BYV9 841 aa12.89□□□□□ -0.35
FN1-211ENST00000443816 LRSAM1Q6UWE0 723 aa12.89□□□□□ -0.35
FN1-211ENST00000443816 C6orf50Q9HD87 102 aa12.89□□□□□ -0.35
FN1-211ENST00000443816 SNRKQ9NRH2 765 aa12.89□□□□□ -0.35
FN1-211ENST00000443816 LDHBP07195 334 aaKnown RBP12.89□□□□□ -0.35
FN1-211ENST00000443816 MTIF2P46199 727 aaKnown RBP12.89□□□□□ -0.35
FN1-211ENST00000443816 SH2D4AQ9H788 454 aa12.89□□□□□ -0.35
FN1-211ENST00000443816 CABLES1Q8TDN4 633 aa12.89□□□□□ -0.35
FN1-211ENST00000443816 TSPYL1Q9H0U9 437 aa12.89□□□□□ -0.35
FN1-211ENST00000443816 EXOC1Q9NV70 894 aa12.89□□□□□ -0.35
FN1-211ENST00000443816 SHANK2Q9UPX8 1470 aa12.89□□□□□ -0.35
FN1-211ENST00000443816 ALDH1L1O75891 902 aa12.89□□□□□ -0.35
FN1-211ENST00000443816 NUP88Q99567 741 aaPredicted RBP12.89□□□□□ -0.35
FN1-211ENST00000443816 HOMER2Q9NSB8 354 aa12.89□□□□□ -0.35
FN1-211ENST00000443816 RMND1Q9NWS8 449 aa12.89□□□□□ -0.35
FN1-211ENST00000443816 RBM27Q9P2N5 1060 aaKnown RBP12.89□□□□□ -0.35
FN1-211ENST00000443816 ZSCAN12O43309 604 aa12.89□□□□□ -0.35
FN1-211ENST00000443816 SOS1Q07889 1333 aaPredicted RBP12.89□□□□□ -0.35
FN1-211ENST00000443816 KIF5CO60282 957 aa12.88□□□□□ -0.35
FN1-211ENST00000443816 EIF6P56537 245 aaKnown RBP12.88□□□□□ -0.35
FN1-211ENST00000443816 BIN2Q9UBW5 565 aaPredicted RBP12.88□□□□□ -0.35
FN1-211ENST00000443816 NSFL1CQ9UNZ2 370 aaKnown RBP12.88□□□□□ -0.35
FN1-211ENST00000443816 DISP3Q9P2K9 1392 aa12.88□□□□□ -0.35
FN1-211ENST00000443816 KIAA0754O94854 1291 aa12.88□□□□□ -0.35
FN1-211ENST00000443816 TCERG1LQ5VWI1 586 aa12.88□□□□□ -0.35
FN1-211ENST00000443816 CNBD1Q8NA66 436 aa12.88□□□□□ -0.35
FN1-211ENST00000443816 PUF60Q9UHX1 559 aaKnown RBP12.88□□□□□ -0.35
FN1-211ENST00000443816 RTN1Q16799 776 aa12.88□□□□□ -0.35
FN1-211ENST00000443816 ZBTB43O43298 467 aa12.88□□□□□ -0.35
FN1-211ENST00000443816 MAP9Q49MG5 647 aa12.88□□□□□ -0.35
FN1-211ENST00000443816 CCDC40Q4G0X9 1142 aa12.88□□□□□ -0.35
FN1-211ENST00000443816 CERS3Q8IU89 383 aa12.88□□□□□ -0.35
FN1-211ENST00000443816 TTC12Q9H892 705 aaPredicted RBP12.88□□□□□ -0.35
FN1-211ENST00000443816 FAM83GA6ND36 823 aa12.88□□□□□ -0.35
FN1-211ENST00000443816 H0YIN7 160 aa12.88□□□□□ -0.35
FN1-211ENST00000443816 CALM1P0DP23 149 aa12.88□□□□□ -0.35
FN1-211ENST00000443816 CALM2P0DP24 149 aa12.88□□□□□ -0.35
FN1-211ENST00000443816 CALM3P0DP25 149 aa12.88□□□□□ -0.35
FN1-211ENST00000443816 MCMDC2Q4G0Z9 681 aa12.88□□□□□ -0.35
FN1-211ENST00000443816 SHROOM2Q13796 1616 aa12.88□□□□□ -0.35
FN1-211ENST00000443816 ZFYVE16Q7Z3T8 1539 aa12.88□□□□□ -0.35
FN1-211ENST00000443816 GCP02774 474 aa12.87□□□□□ -0.35
FN1-211ENST00000443816 HSPA2P54652 639 aa12.87□□□□□ -0.35
FN1-211ENST00000443816 HAND2P61296 217 aa12.87□□□□□ -0.35
FN1-211ENST00000443816 RBM26Q5T8P6 1007 aaKnown RBP12.87□□□□□ -0.35
FN1-211ENST00000443816 SMARCC2Q8TAQ2 1214 aa12.87□□□□□ -0.35
FN1-211ENST00000443816 CTNNBL1Q8WYA6 563 aaPredicted RBP12.87□□□□□ -0.35
FN1-211ENST00000443816 ZSCAN16Q9H4T2 348 aaPredicted RBP12.87□□□□□ -0.35
FN1-211ENST00000443816 SYNCQ9H7C4 482 aa12.87□□□□□ -0.35
FN1-211ENST00000443816 RTL9Q8NET4 1388 aa12.87□□□□□ -0.35
FN1-211ENST00000443816 TOP1P11387 765 aaKnown RBP12.87□□□□□ -0.35
FN1-211ENST00000443816 HEATR3Q7Z4Q2 680 aa12.87□□□□□ -0.35
FN1-211ENST00000443816 KIF2AO00139 706 aaPredicted RBP12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms