RNA–Protein interactions for RNA: ENST00000443443.1

VPS50-206, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2

Gene VPS50, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-206ENST00000443443 ETFBKMTQ8IXQ9 262 aa9.11□□□□□ -0.95
VPS50-206ENST00000443443 LILRB5O75023 590 aa9.1□□□□□ -0.95
VPS50-206ENST00000443443 TRAPPC3LQ5T215 181 aa9.1□□□□□ -0.95
VPS50-206ENST00000443443 FAM35AQ86V20 835 aa9.1□□□□□ -0.95
VPS50-206ENST00000443443 JPH1Q9HDC5 661 aaPredicted RBP9.1□□□□□ -0.95
VPS50-206ENST00000443443 ZFATQ9P243 1243 aa9.1□□□□□ -0.95
VPS50-206ENST00000443443 SLAIN2Q9P270 581 aa9.1□□□□□ -0.95
VPS50-206ENST00000443443 PROCP04070 461 aa9.09□□□□□ -0.95
VPS50-206ENST00000443443 PCSK7Q16549 785 aa9.09□□□□□ -0.95
VPS50-206ENST00000443443 PSAPL1Q6NUJ1 521 aa9.09□□□□□ -0.95
VPS50-206ENST00000443443 C11orf16Q9NQ32 467 aa9.09□□□□□ -0.95
VPS50-206ENST00000443443 RGS9O75916 674 aaPredicted RBP9.08□□□□□ -0.96
VPS50-206ENST00000443443 MAP3K6O95382 1288 aa9.08□□□□□ -0.96
VPS50-206ENST00000443443 CPB1P15086 417 aa9.08□□□□□ -0.96
VPS50-206ENST00000443443 ARID4AP29374 1257 aaPredicted RBP9.08□□□□□ -0.96
VPS50-206ENST00000443443 MLLT1Q03111 559 aaPredicted RBP9.08□□□□□ -0.96
VPS50-206ENST00000443443 TRIM28Q13263 835 aaKnown RBP9.08□□□□□ -0.96
VPS50-206ENST00000443443 PRRT3Q5FWE3 981 aa9.08□□□□□ -0.96
VPS50-206ENST00000443443 C20orf204Q6ZNR8 217 aa9.08□□□□□ -0.96
VPS50-206ENST00000443443 DHX32Q7L7V1 743 aaKnown RBP9.08□□□□□ -0.96
VPS50-206ENST00000443443 SEPT3Q9UH03 358 aa9.08□□□□□ -0.96
VPS50-206ENST00000443443 PIK3R5Q8WYR1 880 aa9.07□□□□□ -0.96
VPS50-206ENST00000443443 PRDM6Q9NQX0 595 aa9.07□□□□□ -0.96
VPS50-206ENST00000443443 FAM13BQ9NYF5 915 aa9.07□□□□□ -0.96
VPS50-206ENST00000443443 STIM2Q9P246 746 aa9.07□□□□□ -0.96
VPS50-206ENST00000443443 C1QTNF9BB2RNN3 333 aa9.06□□□□□ -0.96
VPS50-206ENST00000443443 FAM229AH3BQW9 127 aa9.06□□□□□ -0.96
VPS50-206ENST00000443443 TNFRSF10BO14763 440 aa9.06□□□□□ -0.96
VPS50-206ENST00000443443 FAM26DQ5JW98 314 aa9.06□□□□□ -0.96
VPS50-206ENST00000443443 ELMSAN1Q6PJG2 1045 aa9.06□□□□□ -0.96
VPS50-206ENST00000443443 HFE2Q6ZVN8 426 aa9.06□□□□□ -0.96
VPS50-206ENST00000443443 ERICH6Q7L0X2 663 aa9.06□□□□□ -0.96
VPS50-206ENST00000443443 ARID3AQ99856 593 aa9.06□□□□□ -0.96
VPS50-206ENST00000443443 SUPT5HO00267 1087 aaKnown RBP9.05□□□□□ -0.96
VPS50-206ENST00000443443 SPATA31C1P0DKV0 1188 aa9.05□□□□□ -0.96
VPS50-206ENST00000443443 ZAP70P43403 619 aa9.05□□□□□ -0.96
VPS50-206ENST00000443443 GPR152Q8TDT2 470 aa9.05□□□□□ -0.96
VPS50-206ENST00000443443 KCNMB2Q9Y691 235 aa9.05□□□□□ -0.96
VPS50-206ENST00000443443 ZBTB42B2RXF5 422 aa9.04□□□□□ -0.96
VPS50-206ENST00000443443 UBAP1LF5GYI3 381 aa9.04□□□□□ -0.96
VPS50-206ENST00000443443 EGFRP00533 1210 aa9.04□□□□□ -0.96
VPS50-206ENST00000443443 PSAPP07602 524 aa9.04□□□□□ -0.96
VPS50-206ENST00000443443 NID1P14543 1247 aa9.04□□□□□ -0.96
VPS50-206ENST00000443443 SCNN1AP37088 669 aa9.04□□□□□ -0.96
VPS50-206ENST00000443443 COL9A3Q14050 684 aaPredicted RBP9.04□□□□□ -0.96
VPS50-206ENST00000443443 CD163Q86VB7 1156 aa9.04□□□□□ -0.96
VPS50-206ENST00000443443 TRPM4Q8TD43 1214 aa9.04□□□□□ -0.96
VPS50-206ENST00000443443 TLR7Q9NYK1 1049 aaKnown RBP9.04□□□□□ -0.96
VPS50-206ENST00000443443 NAGPAQ9UK23 515 aa9.04□□□□□ -0.96
VPS50-206ENST00000443443 ZBTB39O15060 712 aa9.03□□□□□ -0.96
VPS50-206ENST00000443443 MMP20O60882 483 aa9.03□□□□□ -0.96
VPS50-206ENST00000443443 ADAM23O75077 832 aa9.03□□□□□ -0.96
VPS50-206ENST00000443443 APBA3O96018 575 aa9.03□□□□□ -0.96
VPS50-206ENST00000443443 PERM1Q5SV97 790 aa9.03□□□□□ -0.96
VPS50-206ENST00000443443 ABTB2Q8N961 1025 aa9.03□□□□□ -0.96
VPS50-206ENST00000443443 FNDC3AQ9Y2H6 1198 aaKnown RBP9.03□□□□□ -0.96
VPS50-206ENST00000443443 CARNS1A5YM72 827 aa9.02□□□□□ -0.97
VPS50-206ENST00000443443 TMEM88BA6NKF7 163 aa9.02□□□□□ -0.97
VPS50-206ENST00000443443 EIF2AK2P19525 551 aaKnown RBP9.02□□□□□ -0.97
VPS50-206ENST00000443443 CHRNA4P43681 627 aa9.02□□□□□ -0.97
VPS50-206ENST00000443443 AFF1P51825 1210 aaKnown RBP9.02□□□□□ -0.97
VPS50-206ENST00000443443 GPLD1P80108 840 aa9.02□□□□□ -0.97
VPS50-206ENST00000443443 PLAURQ03405 335 aa9.02□□□□□ -0.97
VPS50-206ENST00000443443 DMRTC2Q8IXT2 367 aaPredicted RBP9.02□□□□□ -0.97
VPS50-206ENST00000443443 J3QW42 95 aa9.01□□□□□ -0.97
VPS50-206ENST00000443443 GRIK4Q16099 956 aa9.01□□□□□ -0.97
VPS50-206ENST00000443443 NLRP13Q86W25 1043 aa9.01□□□□□ -0.97
VPS50-206ENST00000443443 NSUN5Q96P11 429 aaKnown RBP9.01□□□□□ -0.97
VPS50-206ENST00000443443 LOC102724428A0A0B4J2F2 783 aa9□□□□□ -0.97
VPS50-206ENST00000443443 SSFA2P28290 1259 aa9□□□□□ -0.97
VPS50-206ENST00000443443 NRLP54845 237 aa9□□□□□ -0.97
VPS50-206ENST00000443443 SIK1P57059 783 aa9□□□□□ -0.97
VPS50-206ENST00000443443 RAC1P63000 192 aa9□□□□□ -0.97
VPS50-206ENST00000443443 TRIP4Q15650 581 aaPredicted RBP9□□□□□ -0.97
VPS50-206ENST00000443443 TTC39BQ5VTQ0 682 aaPredicted RBP9□□□□□ -0.97
VPS50-206ENST00000443443 LPIN3Q9BQK8 851 aa9□□□□□ -0.97
VPS50-206ENST00000443443 SMG9Q9H0W8 520 aaKnown RBP9□□□□□ -0.97
VPS50-206ENST00000443443 GHRHP01286 108 aa8.99□□□□□ -0.97
VPS50-206ENST00000443443 BAG6P46379 1132 aa8.99□□□□□ -0.97
VPS50-206ENST00000443443 ATCAYQ86WG3 371 aa8.99□□□□□ -0.97
VPS50-206ENST00000443443 GTF3C2Q8WUA4 911 aaPredicted RBP8.99□□□□□ -0.97
VPS50-206ENST00000443443 RBSNQ9H1K0 784 aa8.99□□□□□ -0.97
VPS50-206ENST00000443443 A0A0A0MRY4 1105 aa8.98□□□□□ -0.97
VPS50-206ENST00000443443 GATA4P43694 442 aa8.98□□□□□ -0.97
VPS50-206ENST00000443443 AAMPQ13685 434 aa8.98□□□□□ -0.97
VPS50-206ENST00000443443 TTC16Q8NEE8 873 aa8.98□□□□□ -0.97
VPS50-206ENST00000443443 HELQQ8TDG4 1101 aa8.98□□□□□ -0.97
VPS50-206ENST00000443443 FRRS1LQ9P0K9 344 aa8.98□□□□□ -0.97
VPS50-206ENST00000443443 DNM1Q05193 864 aaKnown RBP8.97□□□□□ -0.97
VPS50-206ENST00000443443 NOM1Q5C9Z4 860 aaKnown RBP8.97□□□□□ -0.97
VPS50-206ENST00000443443 MSL1Q68DK7 614 aa8.97□□□□□ -0.97
VPS50-206ENST00000443443 WFDC8Q8IUA0 241 aa8.97□□□□□ -0.97
VPS50-206ENST00000443443 PLD4Q96BZ4 506 aa8.97□□□□□ -0.97
VPS50-206ENST00000443443 NUDT16Q96DE0 195 aaKnown RBP8.97□□□□□ -0.97
VPS50-206ENST00000443443 NACC1Q96RE7 527 aa8.97□□□□□ -0.97
VPS50-206ENST00000443443 MTMR7Q9Y216 660 aa8.97□□□□□ -0.97
VPS50-206ENST00000443443 FURINP09958 794 aa8.96□□□□□ -0.98
VPS50-206ENST00000443443 PCSK2P16519 638 aa8.96□□□□□ -0.98
VPS50-206ENST00000443443 MTMR3Q13615 1198 aa8.96□□□□□ -0.98
VPS50-206ENST00000443443 GDF6Q6KF10 455 aaPredicted RBP8.96□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms