RNA–Protein interactions for RNA: ENST00000442461.6

LIN54-202, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

TSL 1 (best) BASIC

Gene LIN54, Length 4,254 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-202ENST00000442461 SPTLC3Q9NUV7 552 aa11.78□□□□□ -0.52
LIN54-202ENST00000442461 RPRD2Q5VT52 1461 aaKnown RBP11.78□□□□□ -0.52
LIN54-202ENST00000442461 KRT86O43790 486 aa11.77□□□□□ -0.52
LIN54-202ENST00000442461 DBN1Q16643 649 aa11.77□□□□□ -0.52
LIN54-202ENST00000442461 SLFNL1Q499Z3 407 aa11.77□□□□□ -0.52
LIN54-202ENST00000442461 CCDC38Q502W7 563 aa11.77□□□□□ -0.52
LIN54-202ENST00000442461 LRRC8AQ8IWT6 810 aa11.77□□□□□ -0.52
LIN54-202ENST00000442461 SYTL4Q96C24 671 aaPredicted RBP11.77□□□□□ -0.52
LIN54-202ENST00000442461 ZBTB40Q9NUA8 1239 aa11.77□□□□□ -0.52
LIN54-202ENST00000442461 MYCNP04198 464 aaPredicted RBP11.77□□□□□ -0.52
LIN54-202ENST00000442461 PDE1AP54750 535 aa11.77□□□□□ -0.52
LIN54-202ENST00000442461 ARHGAP45Q92619 1136 aa11.77□□□□□ -0.52
LIN54-202ENST00000442461 RABGGTAQ92696 567 aa11.77□□□□□ -0.52
LIN54-202ENST00000442461 FRMD3A2A2Y4 597 aa11.77□□□□□ -0.53
LIN54-202ENST00000442461 KIF3CO14782 793 aa11.77□□□□□ -0.53
LIN54-202ENST00000442461 UBE4AQ14139 1066 aa11.77□□□□□ -0.53
LIN54-202ENST00000442461 SNCBQ16143 134 aa11.77□□□□□ -0.53
LIN54-202ENST00000442461 TSNAXIP1Q2TAA8 658 aa11.77□□□□□ -0.53
LIN54-202ENST00000442461 NAPGQ99747 312 aaPredicted RBP11.77□□□□□ -0.53
LIN54-202ENST00000442461 SUFUQ9UMX1 484 aa11.77□□□□□ -0.53
LIN54-202ENST00000442461 GNGT1P63211 74 aa11.77□□□□□ -0.53
LIN54-202ENST00000442461 MAP3K9P80192 1104 aa11.77□□□□□ -0.53
LIN54-202ENST00000442461 HSP90AA4PQ58FG1 418 aa11.77□□□□□ -0.53
LIN54-202ENST00000442461 CCDC155Q8N6L0 562 aa11.77□□□□□ -0.53
LIN54-202ENST00000442461 CAPZA3Q96KX2 299 aa11.77□□□□□ -0.53
LIN54-202ENST00000442461 TACC1O75410 805 aa11.76□□□□□ -0.53
LIN54-202ENST00000442461 GUCY2CP25092 1073 aa11.76□□□□□ -0.53
LIN54-202ENST00000442461 FAM114A1Q8IWE2 563 aa11.76□□□□□ -0.53
LIN54-202ENST00000442461 SMARCC2Q8TAQ2 1214 aa11.76□□□□□ -0.53
LIN54-202ENST00000442461 SLC24A3Q9HC58 644 aa11.76□□□□□ -0.53
LIN54-202ENST00000442461 RIPOR2Q9Y4F9 1068 aa11.76□□□□□ -0.53
LIN54-202ENST00000442461 CFAP70Q5T0N1 1121 aa11.76□□□□□ -0.53
LIN54-202ENST00000442461 STIM2Q9P246 746 aa11.76□□□□□ -0.53
LIN54-202ENST00000442461 GUCA1BQ9UMX6 200 aa11.76□□□□□ -0.53
LIN54-202ENST00000442461 PPFIA4O75335 1185 aa11.76□□□□□ -0.53
LIN54-202ENST00000442461 KRT83P78385 493 aa11.76□□□□□ -0.53
LIN54-202ENST00000442461 NFE2L2Q16236 605 aa11.76□□□□□ -0.53
LIN54-202ENST00000442461 LONRF2Q1L5Z9 754 aa11.76□□□□□ -0.53
LIN54-202ENST00000442461 CACNA2D4Q7Z3S7 1137 aa11.76□□□□□ -0.53
LIN54-202ENST00000442461 PLEKHM2Q8IWE5 1019 aa11.76□□□□□ -0.53
LIN54-202ENST00000442461 WASF1Q92558 559 aa11.76□□□□□ -0.53
LIN54-202ENST00000442461 ADAM21Q9UKJ8 722 aa11.76□□□□□ -0.53
LIN54-202ENST00000442461 CHUKO15111 745 aa11.75□□□□□ -0.53
LIN54-202ENST00000442461 AK2P54819 239 aa11.75□□□□□ -0.53
LIN54-202ENST00000442461 KANK3Q6NY19 840 aa11.75□□□□□ -0.53
LIN54-202ENST00000442461 RGS22Q8NE09 1264 aa11.75□□□□□ -0.53
LIN54-202ENST00000442461 JARID2Q92833 1246 aaPredicted RBP11.75□□□□□ -0.53
LIN54-202ENST00000442461 TAOK3Q9H2K8 898 aa11.75□□□□□ -0.53
LIN54-202ENST00000442461 PSDA5PKW4 1024 aaPredicted RBP11.75□□□□□ -0.53
LIN54-202ENST00000442461 SEC31AO94979 1220 aaKnown RBP11.75□□□□□ -0.53
LIN54-202ENST00000442461 CYP2C19P33261 490 aa11.75□□□□□ -0.53
LIN54-202ENST00000442461 SPAG1Q07617 926 aa11.75□□□□□ -0.53
LIN54-202ENST00000442461 MRFAP1L1Q96HT8 127 aa11.75□□□□□ -0.53
LIN54-202ENST00000442461 SEC62Q99442 399 aaKnown RBP11.75□□□□□ -0.53
LIN54-202ENST00000442461 CAPS2Q9BXY5 557 aa11.75□□□□□ -0.53
LIN54-202ENST00000442461 PRXQ9BXM0 1461 aa11.75□□□□□ -0.53
LIN54-202ENST00000442461 MYL5Q02045 173 aa11.75□□□□□ -0.53
LIN54-202ENST00000442461 PKP1Q13835 747 aa11.75□□□□□ -0.53
LIN54-202ENST00000442461 TDRD12Q587J7 1177 aaKnown RBP11.75□□□□□ -0.53
LIN54-202ENST00000442461 SH2D4BQ5SQS7 431 aa11.75□□□□□ -0.53
LIN54-202ENST00000442461 UBAC1Q9BSL1 405 aa11.75□□□□□ -0.53
LIN54-202ENST00000442461 FAM204AQ9H8W3 233 aa11.75□□□□□ -0.53
LIN54-202ENST00000442461 RTL1A6NKG5 1358 aa11.75□□□□□ -0.53
LIN54-202ENST00000442461 AKR1B10O60218 316 aa11.74□□□□□ -0.53
LIN54-202ENST00000442461 SH3BGRP55822 239 aaPredicted RBP11.74□□□□□ -0.53
LIN54-202ENST00000442461 U3KPZ7 1027 aaPredicted RBP11.74□□□□□ -0.53
LIN54-202ENST00000442461 ANKRD18BA2A2Z9 1011 aa11.74□□□□□ -0.53
LIN54-202ENST00000442461 CCDC151A5D8V7 595 aa11.74□□□□□ -0.53
LIN54-202ENST00000442461 RPSAP08865 295 aaKnown RBP11.74□□□□□ -0.53
LIN54-202ENST00000442461 HPDP32754 393 aaPredicted RBP11.74□□□□□ -0.53
LIN54-202ENST00000442461 KIF5AQ12840 1032 aa11.74□□□□□ -0.53
LIN54-202ENST00000442461 CEP63Q96MT8 703 aa11.74□□□□□ -0.53
LIN54-202ENST00000442461 CARMIL2Q6F5E8 1435 aa11.74□□□□□ -0.53
LIN54-202ENST00000442461 TDRD9Q8NDG6 1382 aaKnown RBP11.74□□□□□ -0.53
LIN54-202ENST00000442461 PPFIA3O75145 1194 aa11.74□□□□□ -0.53
LIN54-202ENST00000442461 LUC7L3O95232 432 aaKnown RBP11.74□□□□□ -0.53
LIN54-202ENST00000442461 MXRA7P84157 204 aa11.74□□□□□ -0.53
LIN54-202ENST00000442461 FAM160A1Q05DH4 1040 aa11.74□□□□□ -0.53
LIN54-202ENST00000442461 ANKRD44Q8N8A2 993 aa11.74□□□□□ -0.53
LIN54-202ENST00000442461 BRF1Q92994 677 aa11.74□□□□□ -0.53
LIN54-202ENST00000442461 CDK5RAP3Q96JB5 506 aa11.74□□□□□ -0.53
LIN54-202ENST00000442461 TTC14Q96N46 770 aa11.74□□□□□ -0.53
LIN54-202ENST00000442461 CABP2Q9NPB3 220 aa11.74□□□□□ -0.53
LIN54-202ENST00000442461 POLR3DP05423 398 aaPredicted RBP11.74□□□□□ -0.53
LIN54-202ENST00000442461 KMT5BQ4FZB7 885 aa11.74□□□□□ -0.53
LIN54-202ENST00000442461 TSHZ3Q63HK5 1081 aa11.74□□□□□ -0.53
LIN54-202ENST00000442461 SRLQ86TD4 932 aa11.74□□□□□ -0.53
LIN54-202ENST00000442461 CACNA2D3Q8IZS8 1091 aa11.74□□□□□ -0.53
LIN54-202ENST00000442461 SAAL1Q96ER3 474 aa11.74□□□□□ -0.53
LIN54-202ENST00000442461 TACO1Q9BSH4 297 aaKnown RBP11.74□□□□□ -0.53
LIN54-202ENST00000442461 FAN1Q9Y2M0 1017 aa11.74□□□□□ -0.53
LIN54-202ENST00000442461 IL16Q14005 1332 aa11.74□□□□□ -0.53
LIN54-202ENST00000442461 GSTTP1A0A1W2PQM5 241 aa11.73□□□□□ -0.53
LIN54-202ENST00000442461 C16orf71Q8IYS4 520 aaPredicted RBP11.73□□□□□ -0.53
LIN54-202ENST00000442461 STMN4Q9H169 189 aaPredicted RBP11.73□□□□□ -0.53
LIN54-202ENST00000442461 DCTPP1Q9H773 170 aa11.73□□□□□ -0.53
LIN54-202ENST00000442461 TTF2Q9UNY4 1162 aaKnown RBP11.73□□□□□ -0.53
LIN54-202ENST00000442461 LRRD1A4D1F6 860 aa11.73□□□□□ -0.53
LIN54-202ENST00000442461 AKR1B15C9JRZ8 316 aaPredicted RBP11.73□□□□□ -0.53
LIN54-202ENST00000442461 CCT2P78371 535 aaKnown RBP11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms