RNA–Protein interactions for RNA: ENST00000441821.5

SYN3-204, Transcript of synapsin III, humanhuman

TSL 1 (best)

Gene SYN3, Length 855 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYN3-204ENST00000441821 MYL6BP14649 208 aa13.28□□□□□ -0.28
SYN3-204ENST00000441821 PARP10Q53GL7 1025 aa13.28□□□□□ -0.28
SYN3-204ENST00000441821 DPP8Q6V1X1 898 aaPredicted RBP13.28□□□□□ -0.28
SYN3-204ENST00000441821 SP8Q8IXZ3 490 aa13.28□□□□□ -0.28
SYN3-204ENST00000441821 TRPM4Q8TD43 1214 aa13.28□□□□□ -0.28
SYN3-204ENST00000441821 CNOT7Q9UIV1 285 aaKnown RBP13.28□□□□□ -0.28
SYN3-204ENST00000441821 ABCC4O15439 1325 aa13.28□□□□□ -0.28
SYN3-204ENST00000441821 H7C1D1 291 aa13.27□□□□□ -0.29
SYN3-204ENST00000441821 EIF4A1P60842 406 aaKnown RBP13.27□□□□□ -0.29
SYN3-204ENST00000441821 USP48Q86UV5 1035 aa13.27□□□□□ -0.29
SYN3-204ENST00000441821 MPNDQ8N594 471 aa13.27□□□□□ -0.29
SYN3-204ENST00000441821 FAM155AB1AL88 458 aaPredicted RBP13.26□□□□□ -0.29
SYN3-204ENST00000441821 ERBB4Q15303 1308 aa13.26□□□□□ -0.29
SYN3-204ENST00000441821 RGMBQ6NW40 437 aa13.26□□□□□ -0.29
SYN3-204ENST00000441821 KDM3BQ7LBC6 1761 aa13.26□□□□□ -0.29
SYN3-204ENST00000441821 CCDC102AQ96A19 550 aa13.26□□□□□ -0.29
SYN3-204ENST00000441821 UTP14AQ9BVJ6 771 aaKnown RBP13.26□□□□□ -0.29
SYN3-204ENST00000441821 YDJCA8MPS7 323 aa13.25□□□□□ -0.29
SYN3-204ENST00000441821 SOX10P56693 466 aa13.25□□□□□ -0.29
SYN3-204ENST00000441821 MICALL2Q8IY33 904 aa13.25□□□□□ -0.29
SYN3-204ENST00000441821 DPF2Q92785 391 aa13.25□□□□□ -0.29
SYN3-204ENST00000441821 SHTN1A0MZ66 631 aa13.24□□□□□ -0.29
SYN3-204ENST00000441821 KIF23Q02241 960 aaPredicted RBP13.24□□□□□ -0.29
SYN3-204ENST00000441821 PRPF38BQ5VTL8 546 aaKnown RBP13.24□□□□□ -0.29
SYN3-204ENST00000441821 C2orf69Q8N8R5 385 aa13.24□□□□□ -0.29
SYN3-204ENST00000441821 RNF186Q9NXI6 227 aa13.24□□□□□ -0.29
SYN3-204ENST00000441821 TRPA1O75762 1119 aa13.23□□□□□ -0.29
SYN3-204ENST00000441821 ZNF157P51786 506 aaPredicted RBP13.23□□□□□ -0.29
SYN3-204ENST00000441821 DLK2Q6UY11 383 aa13.23□□□□□ -0.29
SYN3-204ENST00000441821 DDX46Q7L014 1031 aaKnown RBP13.23□□□□□ -0.29
SYN3-204ENST00000441821 SAMD7Q7Z3H4 446 aa13.23□□□□□ -0.29
SYN3-204ENST00000441821 KRT26Q7Z3Y9 468 aa13.23□□□□□ -0.29
SYN3-204ENST00000441821 TMC4Q7Z404 712 aa13.23□□□□□ -0.29
SYN3-204ENST00000441821 GBA2Q9HCG7 927 aaPredicted RBP13.23□□□□□ -0.29
SYN3-204ENST00000441821 ZBTB12Q9Y330 459 aaPredicted RBP13.23□□□□□ -0.29
SYN3-204ENST00000441821 PDE4DIPQ5VU43 2346 aa13.23□□□□□ -0.29
SYN3-204ENST00000441821 ANKRD36CQ5JPF3 1778 aa13.22□□□□□ -0.29
SYN3-204ENST00000441821 PPP2R1AP30153 589 aa13.22□□□□□ -0.29
SYN3-204ENST00000441821 GRAPQ13588 217 aa13.22□□□□□ -0.29
SYN3-204ENST00000441821 LRP10Q7Z4F1 713 aa13.22□□□□□ -0.29
SYN3-204ENST00000441821 GRAPLQ8TC17 118 aaPredicted RBP13.22□□□□□ -0.29
SYN3-204ENST00000441821 LAMB2P55268 1798 aa13.22□□□□□ -0.29
SYN3-204ENST00000441821 PSMD14O00487 310 aa13.21□□□□□ -0.29
SYN3-204ENST00000441821 NEFMP07197 916 aa13.21□□□□□ -0.29
SYN3-204ENST00000441821 HCLS1P14317 486 aaPredicted RBP13.21□□□□□ -0.29
SYN3-204ENST00000441821 TBC1D10BQ4KMP7 808 aaPredicted RBP13.21□□□□□ -0.29
SYN3-204ENST00000441821 CTU1Q7Z7A3 348 aaKnown RBP13.21□□□□□ -0.29
SYN3-204ENST00000441821 REM2Q8IYK8 340 aaPredicted RBP13.21□□□□□ -0.29
SYN3-204ENST00000441821 DCPSQ96C86 337 aaKnown RBP13.21□□□□□ -0.29
SYN3-204ENST00000441821 CSRNP1Q96S65 589 aa13.21□□□□□ -0.29
SYN3-204ENST00000441821 DUOX1Q9NRD9 1551 aa13.2□□□□□ -0.3
SYN3-204ENST00000441821 DLG5Q8TDM6 1919 aa13.2□□□□□ -0.3
SYN3-204ENST00000441821 EGFRP00533 1210 aa13.2□□□□□ -0.3
SYN3-204ENST00000441821 SLC10A3P09131 477 aa13.2□□□□□ -0.3
SYN3-204ENST00000441821 RPS12P25398 132 aaKnown RBP13.2□□□□□ -0.3
SYN3-204ENST00000441821 PDIA6Q15084 440 aa13.2□□□□□ -0.3
SYN3-204ENST00000441821 WASHC4Q2M389 1173 aa13.2□□□□□ -0.3
SYN3-204ENST00000441821 HSP90AB3PQ58FF7 597 aa13.2□□□□□ -0.3
SYN3-204ENST00000441821 NLRP10Q86W26 655 aa13.2□□□□□ -0.3
SYN3-204ENST00000441821 THUMPD2Q9BTF0 503 aaKnown RBP13.2□□□□□ -0.3
SYN3-204ENST00000441821 ADM5C9JUS6 153 aa13.19□□□□□ -0.3
SYN3-204ENST00000441821 AKAP11Q9UKA4 1901 aa13.19□□□□□ -0.3
SYN3-204ENST00000441821 LRRC37AA6NMS7 1700 aa13.19□□□□□ -0.3
SYN3-204ENST00000441821 SH3TC1Q8TE82 1336 aa13.18□□□□□ -0.3
SYN3-204ENST00000441821 NFE2L2Q16236 605 aa13.18□□□□□ -0.3
SYN3-204ENST00000441821 RBM26Q5T8P6 1007 aaKnown RBP13.18□□□□□ -0.3
SYN3-204ENST00000441821 CCER1Q8TC90 406 aaPredicted RBP13.18□□□□□ -0.3
SYN3-204ENST00000441821 PLEKHF1Q96S99 279 aa13.18□□□□□ -0.3
SYN3-204ENST00000441821 DBNDD1Q9H9R9 158 aa13.18□□□□□ -0.3
SYN3-204ENST00000441821 TRMT112Q9UI30 125 aaKnown RBP13.18□□□□□ -0.3
SYN3-204ENST00000441821 EIF2S2P20042 333 aaKnown RBP13.17□□□□□ -0.3
SYN3-204ENST00000441821 TCIRG1Q13488 830 aa13.17□□□□□ -0.3
SYN3-204ENST00000441821 PKN2Q16513 984 aaKnown RBP13.17□□□□□ -0.3
SYN3-204ENST00000441821 PROSER3Q2NL68 480 aa13.17□□□□□ -0.3
SYN3-204ENST00000441821 COPS6Q7L5N1 327 aa13.17□□□□□ -0.3
SYN3-204ENST00000441821 SULF1Q8IWU6 871 aa13.17□□□□□ -0.3
SYN3-204ENST00000441821 NSFL1CQ9UNZ2 370 aaKnown RBP13.17□□□□□ -0.3
SYN3-204ENST00000441821 HPS5Q9UPZ3 1129 aa13.17□□□□□ -0.3
SYN3-204ENST00000441821 POLR2AP24928 1970 aaKnown RBP13.17□□□□□ -0.3
SYN3-204ENST00000441821 MKI67P46013 3256 aaKnown RBP13.17□□□□□ -0.3
SYN3-204ENST00000441821 RIMBP2O15034 1052 aa13.16□□□□□ -0.3
SYN3-204ENST00000441821 ANXA1P04083 346 aa13.16□□□□□ -0.3
SYN3-204ENST00000441821 KIF4BQ2VIQ3 1234 aa13.16□□□□□ -0.3
SYN3-204ENST00000441821 CDCA5Q96FF9 252 aa13.16□□□□□ -0.3
SYN3-204ENST00000441821 KCNQ5Q9NR82 932 aa13.16□□□□□ -0.3
SYN3-204ENST00000441821 POLLQ9UGP5 575 aa13.16□□□□□ -0.3
SYN3-204ENST00000441821 TSPYL4Q9UJ04 414 aa13.16□□□□□ -0.3
SYN3-204ENST00000441821 TAF1P21675 1872 aa13.16□□□□□ -0.3
SYN3-204ENST00000441821 RTL9Q8NET4 1388 aa13.16□□□□□ -0.3
SYN3-204ENST00000441821 C6orf229H3BNL8 230 aa13.15□□□□□ -0.3
SYN3-204ENST00000441821 ECE2O60344 883 aa13.15□□□□□ -0.3
SYN3-204ENST00000441821 RASAL3Q86YV0 1011 aa13.15□□□□□ -0.3
SYN3-204ENST00000441821 EYA3Q99504 573 aa13.15□□□□□ -0.3
SYN3-204ENST00000441821 GGA3Q9NZ52 723 aa13.15□□□□□ -0.3
SYN3-204ENST00000441821 VIL1P09327 827 aaKnown RBP13.14□□□□□ -0.31
SYN3-204ENST00000441821 FKBP1BP68106 108 aa13.14□□□□□ -0.31
SYN3-204ENST00000441821 AIMP1Q12904 312 aaKnown RBP13.14□□□□□ -0.31
SYN3-204ENST00000441821 SF3B3Q15393 1217 aaKnown RBP13.14□□□□□ -0.31
SYN3-204ENST00000441821 DOK7Q18PE1 504 aa13.14□□□□□ -0.31
SYN3-204ENST00000441821 XAGE3Q8WTP9 111 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms