RNA–Protein interactions for RNA: ENST00000440903.1

CCDC140-202, Transcript of coiled-coil domain containing 140, humanhuman

APPRIS ALT2 TSL 3

Gene CCDC140, Length 441 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC140-202ENST00000440903 C8orf58Q8NAV2 365 aa6.33□□□□□ -1.4
CCDC140-202ENST00000440903 NECTIN2Q92692 538 aa6.33□□□□□ -1.4
CCDC140-202ENST00000440903 ARXQ96QS3 562 aa6.33□□□□□ -1.4
CCDC140-202ENST00000440903 DDX21Q9NR30 783 aaKnown RBP eCLIP6.33□□□□□ -1.4
CCDC140-202ENST00000440903 RTCBQ9Y3I0 505 aaKnown RBP6.33□□□□□ -1.4
CCDC140-202ENST00000440903 COL15A1P39059 1388 aa6.32□□□□□ -1.4
CCDC140-202ENST00000440903 PTPRCP08575 1304 aa6.32□□□□□ -1.4
CCDC140-202ENST00000440903 RNF40O75150 1001 aa6.32□□□□□ -1.4
CCDC140-202ENST00000440903 CYP19A1P11511 503 aaPredicted RBP6.32□□□□□ -1.4
CCDC140-202ENST00000440903 MYL6BP14649 208 aa6.32□□□□□ -1.4
CCDC140-202ENST00000440903 SSFA2P28290 1259 aa6.32□□□□□ -1.4
CCDC140-202ENST00000440903 NEXNQ0ZGT2 675 aa6.32□□□□□ -1.4
CCDC140-202ENST00000440903 FKBP5Q13451 457 aaPredicted RBP6.32□□□□□ -1.4
CCDC140-202ENST00000440903 EZH2Q15910 746 aaKnown RBP6.32□□□□□ -1.4
CCDC140-202ENST00000440903 KRT24Q2M2I5 525 aa6.32□□□□□ -1.4
CCDC140-202ENST00000440903 HSP90AB3PQ58FF7 597 aa6.32□□□□□ -1.4
CCDC140-202ENST00000440903 RC3H1Q5TC82 1133 aaKnown RBP6.32□□□□□ -1.4
CCDC140-202ENST00000440903 SAMD7Q7Z3H4 446 aa6.32□□□□□ -1.4
CCDC140-202ENST00000440903 FTSJ3Q8IY81 847 aaKnown RBP6.32□□□□□ -1.4
CCDC140-202ENST00000440903 API5Q9BZZ5 524 aaKnown RBP6.32□□□□□ -1.4
CCDC140-202ENST00000440903 TFCP2L1Q9NZI6 479 aa6.32□□□□□ -1.4
CCDC140-202ENST00000440903 CHPF2Q9P2E5 772 aa6.32□□□□□ -1.4
CCDC140-202ENST00000440903 NUP188Q5SRE5 1749 aa6.31□□□□□ -1.4
CCDC140-202ENST00000440903 PXDNLA1KZ92 1463 aa6.31□□□□□ -1.4
CCDC140-202ENST00000440903 ZPR1O75312 459 aa6.31□□□□□ -1.4
CCDC140-202ENST00000440903 VAMP4O75379 141 aa6.31□□□□□ -1.4
CCDC140-202ENST00000440903 RFC4P35249 363 aa6.31□□□□□ -1.4
CCDC140-202ENST00000440903 GGCXP38435 758 aa6.31□□□□□ -1.4
CCDC140-202ENST00000440903 ITPK1Q13572 414 aa6.31□□□□□ -1.4
CCDC140-202ENST00000440903 ZKSCAN2Q63HK3 967 aa6.31□□□□□ -1.4
CCDC140-202ENST00000440903 PTF1AQ7RTS3 328 aa6.31□□□□□ -1.4
CCDC140-202ENST00000440903 DEFB132Q7Z7B7 95 aa6.31□□□□□ -1.4
CCDC140-202ENST00000440903 TSPYL6Q8N831 410 aa6.31□□□□□ -1.4
CCDC140-202ENST00000440903 LINC00116Q8NCU8 138 aa6.31□□□□□ -1.4
CCDC140-202ENST00000440903 FRAT1Q92837 279 aaPredicted RBP6.31□□□□□ -1.4
CCDC140-202ENST00000440903 BCL2L13Q9BXK5 485 aa6.31□□□□□ -1.4
CCDC140-202ENST00000440903 CHMP4BQ9H444 224 aaKnown RBP6.31□□□□□ -1.4
CCDC140-202ENST00000440903 ZBTB1Q9Y2K1 713 aa6.31□□□□□ -1.4
CCDC140-202ENST00000440903 SCN7AQ01118 1682 aa6.3□□□□□ -1.4
CCDC140-202ENST00000440903 TAF1LQ8IZX4 1826 aa6.3□□□□□ -1.4
CCDC140-202ENST00000440903 PRAMEF22A3QJZ6 481 aa6.3□□□□□ -1.4
CCDC140-202ENST00000440903 NPHP1O15259 732 aa6.3□□□□□ -1.4
CCDC140-202ENST00000440903 RPS6KA4O75676 772 aa6.3□□□□□ -1.4
CCDC140-202ENST00000440903 RARSP54136 660 aaKnown RBP6.3□□□□□ -1.4
CCDC140-202ENST00000440903 AIMP1Q12904 312 aaKnown RBP6.3□□□□□ -1.4
CCDC140-202ENST00000440903 FLIIQ13045 1269 aa6.3□□□□□ -1.4
CCDC140-202ENST00000440903 TRAPPC3LQ5T215 181 aa6.3□□□□□ -1.4
CCDC140-202ENST00000440903 RIC3Q7Z5B4 369 aa6.3□□□□□ -1.4
CCDC140-202ENST00000440903 DZIP3Q86Y13 1208 aaKnown RBP6.3□□□□□ -1.4
CCDC140-202ENST00000440903 SSH1Q8WYL5 1049 aa6.3□□□□□ -1.4
CCDC140-202ENST00000440903 ZNF516Q92618 1163 aa6.3□□□□□ -1.4
CCDC140-202ENST00000440903 DDX12PQ92771 950 aa6.3□□□□□ -1.4
CCDC140-202ENST00000440903 CAMKK2Q96RR4 588 aa6.3□□□□□ -1.4
CCDC140-202ENST00000440903 TSKSQ9UJT2 592 aa6.3□□□□□ -1.4
CCDC140-202ENST00000440903 USP16Q9Y5T5 823 aa6.3□□□□□ -1.4
CCDC140-202ENST00000440903 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP6.29□□□□□ -1.4
CCDC140-202ENST00000440903 SMAPO00193 183 aa6.29□□□□□ -1.4
CCDC140-202ENST00000440903 TCERG1O14776 1098 aaKnown RBP6.29□□□□□ -1.4
CCDC140-202ENST00000440903 MAP3K7O43318 606 aa6.29□□□□□ -1.4
CCDC140-202ENST00000440903 A1BGP04217 495 aa6.29□□□□□ -1.4
CCDC140-202ENST00000440903 HSP90B1P14625 803 aaKnown RBP6.29□□□□□ -1.4
CCDC140-202ENST00000440903 SLC15A2Q16348 729 aa6.29□□□□□ -1.4
CCDC140-202ENST00000440903 XAGE3Q8WTP9 111 aa6.29□□□□□ -1.4
CCDC140-202ENST00000440903 SLC4A9Q96Q91 983 aa6.29□□□□□ -1.4
CCDC140-202ENST00000440903 HDAC5Q9UQL6 1122 aa6.29□□□□□ -1.4
CCDC140-202ENST00000440903 MAP3K15Q6ZN16 1313 aa6.28□□□□□ -1.4
CCDC140-202ENST00000440903 USP42Q9H9J4 1324 aaKnown RBP6.28□□□□□ -1.4
CCDC140-202ENST00000440903 QSER1Q2KHR3 1735 aa6.28□□□□□ -1.4
CCDC140-202ENST00000440903 DPYSL4O14531 572 aa6.28□□□□□ -1.4
CCDC140-202ENST00000440903 ANXA1P04083 346 aa6.28□□□□□ -1.4
CCDC140-202ENST00000440903 PIP4K2AP48426 406 aaPredicted RBP6.28□□□□□ -1.4
CCDC140-202ENST00000440903 CCT4P50991 539 aaKnown RBP6.28□□□□□ -1.4
CCDC140-202ENST00000440903 EIF5P55010 431 aaKnown RBP6.28□□□□□ -1.4
CCDC140-202ENST00000440903 BRPF1P55201 1214 aaPredicted RBP6.28□□□□□ -1.4
CCDC140-202ENST00000440903 RRP1P56182 461 aaKnown RBP6.28□□□□□ -1.4
CCDC140-202ENST00000440903 KCNQ4P56696 695 aa6.28□□□□□ -1.4
CCDC140-202ENST00000440903 ZNF827Q17R98 1081 aa6.28□□□□□ -1.4
CCDC140-202ENST00000440903 INTS5Q6P9B9 1019 aaKnown RBP6.28□□□□□ -1.4
CCDC140-202ENST00000440903 SLC4A10Q6U841 1118 aa6.28□□□□□ -1.4
CCDC140-202ENST00000440903 KSR2Q6VAB6 950 aa6.28□□□□□ -1.4
CCDC140-202ENST00000440903 ATF7IPQ6VMQ6 1270 aa6.28□□□□□ -1.4
CCDC140-202ENST00000440903 COPS6Q7L5N1 327 aa6.28□□□□□ -1.4
CCDC140-202ENST00000440903 PLBD2Q8NHP8 589 aa6.28□□□□□ -1.4
CCDC140-202ENST00000440903 DNAAF4Q8WXU2 420 aa6.28□□□□□ -1.4
CCDC140-202ENST00000440903 ARHGAP45Q92619 1136 aa6.28□□□□□ -1.4
CCDC140-202ENST00000440903 ZBTB3Q9H5J0 574 aa6.28□□□□□ -1.4
CCDC140-202ENST00000440903 LRRC4BQ9NT99 713 aa6.28□□□□□ -1.4
CCDC140-202ENST00000440903 BCORQ6W2J9 1755 aa6.28□□□□□ -1.4
CCDC140-202ENST00000440903 CACNA1FO60840 1977 aa6.27□□□□□ -1.4
CCDC140-202ENST00000440903 RNF123Q5XPI4 1314 aa6.27□□□□□ -1.41
CCDC140-202ENST00000440903 ATP10DQ9P241 1426 aa6.27□□□□□ -1.41
CCDC140-202ENST00000440903 NBPF26B4DH59 902 aa6.27□□□□□ -1.41
CCDC140-202ENST00000440903 ERVV-1B6SEH8 477 aa6.27□□□□□ -1.41
CCDC140-202ENST00000440903 GTPBP6O43824 516 aaPredicted RBP6.27□□□□□ -1.41
CCDC140-202ENST00000440903 POLD1P28340 1107 aa6.27□□□□□ -1.41
CCDC140-202ENST00000440903 GTF2E1P29083 439 aaPredicted RBP6.27□□□□□ -1.41
CCDC140-202ENST00000440903 NBR1Q14596 966 aa6.27□□□□□ -1.41
CCDC140-202ENST00000440903 PROSER3Q2NL68 480 aa6.27□□□□□ -1.41
CCDC140-202ENST00000440903 PKDCCQ504Y2 493 aa6.27□□□□□ -1.41
CCDC140-202ENST00000440903 PARP10Q53GL7 1025 aa6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms