RNA–Protein interactions for RNA: ENST00000440835.6

PTPRR-204, Transcript of protein tyrosine phosphatase, receptor type R, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRR, Length 2,818 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRR-204ENST00000440835 GPRC5DQ9NZD1 345 aa7.8□□□□□ -1.16
PTPRR-204ENST00000440835 PPIP5K2O43314 1243 aa7.8□□□□□ -1.16
PTPRR-204ENST00000440835 SCNN1DP51172 638 aa7.8□□□□□ -1.16
PTPRR-204ENST00000440835 KIAA2012Q0VF49 1180 aa7.8□□□□□ -1.16
PTPRR-204ENST00000440835 DDX46Q7L014 1031 aaKnown RBP7.8□□□□□ -1.16
PTPRR-204ENST00000440835 BEGAINQ9BUH8 593 aa7.8□□□□□ -1.16
PTPRR-204ENST00000440835 HSPA8P11142 646 aaKnown RBP7.79□□□□□ -1.16
PTPRR-204ENST00000440835 RPS12P25398 132 aaKnown RBP7.79□□□□□ -1.16
PTPRR-204ENST00000440835 MMP14P50281 582 aa7.79□□□□□ -1.16
PTPRR-204ENST00000440835 TRIM28Q13263 835 aaKnown RBP7.79□□□□□ -1.16
PTPRR-204ENST00000440835 TCIRG1Q13488 830 aa7.79□□□□□ -1.16
PTPRR-204ENST00000440835 GRAPQ13588 217 aa7.79□□□□□ -1.16
PTPRR-204ENST00000440835 PDIA6Q15084 440 aa7.79□□□□□ -1.16
PTPRR-204ENST00000440835 GRAPLQ8TC17 118 aaPredicted RBP7.79□□□□□ -1.16
PTPRR-204ENST00000440835 DPF2Q92785 391 aa7.79□□□□□ -1.16
PTPRR-204ENST00000440835 COL4A5P29400 1685 aa7.79□□□□□ -1.16
PTPRR-204ENST00000440835 SH3TC1Q8TE82 1336 aa7.79□□□□□ -1.16
PTPRR-204ENST00000440835 MYL6BP14649 208 aa7.79□□□□□ -1.16
PTPRR-204ENST00000440835 DDX10Q13206 875 aaKnown RBP7.79□□□□□ -1.16
PTPRR-204ENST00000440835 CIAPIN1Q6FI81 312 aa7.79□□□□□ -1.16
PTPRR-204ENST00000440835 NUTM1Q86Y26 1132 aa7.79□□□□□ -1.16
PTPRR-204ENST00000440835 REM2Q8IYK8 340 aaPredicted RBP7.79□□□□□ -1.16
PTPRR-204ENST00000440835 MPNDQ8N594 471 aa7.79□□□□□ -1.16
PTPRR-204ENST00000440835 ZBTB3Q9H5J0 574 aa7.79□□□□□ -1.16
PTPRR-204ENST00000440835 ZBTB4Q9P1Z0 1013 aaPredicted RBP7.79□□□□□ -1.16
PTPRR-204ENST00000440835 ABCC4O15439 1325 aa7.79□□□□□ -1.16
PTPRR-204ENST00000440835 CHL1O00533 1208 aa7.79□□□□□ -1.16
PTPRR-204ENST00000440835 ANP32CO43423 234 aa7.79□□□□□ -1.16
PTPRR-204ENST00000440835 TMPOP42166 694 aaKnown RBP7.79□□□□□ -1.16
PTPRR-204ENST00000440835 RIPK4P57078 832 aa7.79□□□□□ -1.16
PTPRR-204ENST00000440835 CALD1Q05682 793 aaKnown RBP7.79□□□□□ -1.16
PTPRR-204ENST00000440835 DPP8Q6V1X1 898 aaPredicted RBP7.79□□□□□ -1.16
PTPRR-204ENST00000440835 NLRP10Q86W26 655 aa7.79□□□□□ -1.16
PTPRR-204ENST00000440835 ABT1Q9ULW3 272 aaKnown RBP7.79□□□□□ -1.16
PTPRR-204ENST00000440835 GJA3Q9Y6H8 435 aa7.79□□□□□ -1.16
PTPRR-204ENST00000440835 FAM177BA6PVY3 158 aa7.78□□□□□ -1.16
PTPRR-204ENST00000440835 BRPF1P55201 1214 aaPredicted RBP7.78□□□□□ -1.16
PTPRR-204ENST00000440835 SF3B3Q15393 1217 aaKnown RBP7.78□□□□□ -1.16
PTPRR-204ENST00000440835 MAP1SQ66K74 1059 aaPredicted RBP7.78□□□□□ -1.16
PTPRR-204ENST00000440835 PLBD2Q8NHP8 589 aa7.78□□□□□ -1.16
PTPRR-204ENST00000440835 CAPNS2Q96L46 248 aa7.78□□□□□ -1.16
PTPRR-204ENST00000440835 EYA3Q99504 573 aa7.78□□□□□ -1.16
PTPRR-204ENST00000440835 HYPKQ9NX55 129 aa7.78□□□□□ -1.16
PTPRR-204ENST00000440835 MIS18AQ9NYP9 233 aa7.78□□□□□ -1.16
PTPRR-204ENST00000440835 MYBBP1AQ9BQG0 1328 aaKnown RBP7.78□□□□□ -1.16
PTPRR-204ENST00000440835 GPTP24298 496 aa7.78□□□□□ -1.16
PTPRR-204ENST00000440835 PDE4CQ08493 712 aa7.78□□□□□ -1.16
PTPRR-204ENST00000440835 PSME4Q14997 1843 aa7.78□□□□□ -1.16
PTPRR-204ENST00000440835 H7C1D1 291 aa7.77□□□□□ -1.17
PTPRR-204ENST00000440835 CDC37L1Q7L3B6 337 aa7.77□□□□□ -1.17
PTPRR-204ENST00000440835 RUNDC1Q96C34 613 aa7.77□□□□□ -1.17
PTPRR-204ENST00000440835 DBF4Q9UBU7 674 aaPredicted RBP7.77□□□□□ -1.17
PTPRR-204ENST00000440835 EPS15P42566 896 aa7.77□□□□□ -1.17
PTPRR-204ENST00000440835 CXCL9Q07325 125 aa7.77□□□□□ -1.17
PTPRR-204ENST00000440835 NGEFQ8N5V2 710 aa7.77□□□□□ -1.17
PTPRR-204ENST00000440835 IL27Q8NEV9 243 aa7.77□□□□□ -1.17
PTPRR-204ENST00000440835 ISCA1Q9BUE6 129 aa7.77□□□□□ -1.17
PTPRR-204ENST00000440835 SAGE1Q9NXZ1 904 aa7.77□□□□□ -1.17
PTPRR-204ENST00000440835 TRMT112Q9UI30 125 aaKnown RBP7.77□□□□□ -1.17
PTPRR-204ENST00000440835 RGS19P49795 217 aa7.76□□□□□ -1.17
PTPRR-204ENST00000440835 AOC3Q16853 763 aa7.76□□□□□ -1.17
PTPRR-204ENST00000440835 OLFM4Q6UX06 510 aa7.76□□□□□ -1.17
PTPRR-204ENST00000440835 GPR101Q96P66 508 aaPredicted RBP7.76□□□□□ -1.17
PTPRR-204ENST00000440835 DUOX1Q9NRD9 1551 aa7.76□□□□□ -1.17
PTPRR-204ENST00000440835 GMPSP49915 693 aaPredicted RBP7.76□□□□□ -1.17
PTPRR-204ENST00000440835 LBX1P52954 281 aa7.76□□□□□ -1.17
PTPRR-204ENST00000440835 COPS6Q7L5N1 327 aa7.76□□□□□ -1.17
PTPRR-204ENST00000440835 XAGE3Q8WTP9 111 aa7.76□□□□□ -1.17
PTPRR-204ENST00000440835 BCL2L13Q9BXK5 485 aa7.76□□□□□ -1.17
PTPRR-204ENST00000440835 NOGQ13253 232 aa7.75□□□□□ -1.17
PTPRR-204ENST00000440835 CNGB1Q14028 1251 aaPredicted RBP7.75□□□□□ -1.17
PTPRR-204ENST00000440835 TAF7LQ5H9L4 462 aa7.75□□□□□ -1.17
PTPRR-204ENST00000440835 SAPCD2Q86UD0 394 aa7.75□□□□□ -1.17
PTPRR-204ENST00000440835 CFAP44Q96MT7 982 aa7.75□□□□□ -1.17
PTPRR-204ENST00000440835 CAPN15O75808 1086 aa7.75□□□□□ -1.17
PTPRR-204ENST00000440835 CST9Q5W186 159 aa7.75□□□□□ -1.17
PTPRR-204ENST00000440835 ANKRD13DQ6ZTN6 518 aa7.75□□□□□ -1.17
PTPRR-204ENST00000440835 CCDC102AQ96A19 550 aa7.75□□□□□ -1.17
PTPRR-204ENST00000440835 ABHD8Q96I13 439 aa7.75□□□□□ -1.17
PTPRR-204ENST00000440835 EIF2S2P20042 333 aaKnown RBP7.74□□□□□ -1.17
PTPRR-204ENST00000440835 FKBP1BP68106 108 aa7.74□□□□□ -1.17
PTPRR-204ENST00000440835 WDR43Q15061 677 aaKnown RBP eCLIP7.74□□□□□ -1.17
PTPRR-204ENST00000440835 C3orf67Q6ZVT6 689 aa7.74□□□□□ -1.17
PTPRR-204ENST00000440835 THUMPD2Q9BTF0 503 aaKnown RBP7.74□□□□□ -1.17
PTPRR-204ENST00000440835 CNOT7Q9UIV1 285 aaKnown RBP7.74□□□□□ -1.17
PTPRR-204ENST00000440835 CELF2O95319 508 aaKnown RBP7.74□□□□□ -1.17
PTPRR-204ENST00000440835 WASHC4Q2M389 1173 aa7.74□□□□□ -1.17
PTPRR-204ENST00000440835 HDGFL1Q5TGJ6 251 aa7.74□□□□□ -1.17
PTPRR-204ENST00000440835 PIAS4Q8N2W9 510 aaPredicted RBP7.74□□□□□ -1.17
PTPRR-204ENST00000440835 IFT57Q9NWB7 429 aa7.74□□□□□ -1.17
PTPRR-204ENST00000440835 PITPNM2Q9BZ72 1349 aa7.73□□□□□ -1.17
PTPRR-204ENST00000440835 CACNA1FO60840 1977 aa7.73□□□□□ -1.17
PTPRR-204ENST00000440835 CCER2I3L3R5 266 aa7.73□□□□□ -1.17
PTPRR-204ENST00000440835 GNAI1P63096 354 aa7.73□□□□□ -1.17
PTPRR-204ENST00000440835 NBR1Q14596 966 aa7.73□□□□□ -1.17
PTPRR-204ENST00000440835 CCDC191Q8NCU4 936 aa7.73□□□□□ -1.17
PTPRR-204ENST00000440835 AGBL3Q8NEM8 1001 aa7.73□□□□□ -1.17
PTPRR-204ENST00000440835 RTL9Q8NET4 1388 aa7.73□□□□□ -1.17
PTPRR-204ENST00000440835 AKAP11Q9UKA4 1901 aa7.73□□□□□ -1.17
PTPRR-204ENST00000440835 DDX58O95786 925 aaKnown RBP7.73□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 309.5 ms