RNA–Protein interactions for RNA: ENST00000440431.6

SCN3A-204, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

TSL 5

Gene SCN3A, Length 4,146 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-204ENST00000440431 CCDC73Q6ZRK6 1079 aa5.39□□□□□ -1.55
SCN3A-204ENST00000440431 R3HCC1Q9Y3T6 440 aaKnown RBP5.39□□□□□ -1.55
SCN3A-204ENST00000440431 CYP46A1Q9Y6A2 500 aa5.39□□□□□ -1.55
SCN3A-204ENST00000440431 ANKRD36CQ5JPF3 1778 aa5.39□□□□□ -1.55
SCN3A-204ENST00000440431 GOLGA6L19H0YKK7 550 aa5.39□□□□□ -1.55
SCN3A-204ENST00000440431 BAG3O95817 575 aa5.39□□□□□ -1.55
SCN3A-204ENST00000440431 PIP4K2AP48426 406 aaPredicted RBP5.39□□□□□ -1.55
SCN3A-204ENST00000440431 RBM5P52756 815 aaKnown RBP eCLIP5.39□□□□□ -1.55
SCN3A-204ENST00000440431 SOGA3Q5TF21 947 aa5.39□□□□□ -1.55
SCN3A-204ENST00000440431 WWC2Q6AWC2 1192 aa5.39□□□□□ -1.55
SCN3A-204ENST00000440431 BICDL1Q6ZP65 573 aa5.39□□□□□ -1.55
SCN3A-204ENST00000440431 CHD1LQ86WJ1 897 aa5.39□□□□□ -1.55
SCN3A-204ENST00000440431 NBPF5PQ86XG9 351 aaPredicted RBP5.39□□□□□ -1.55
SCN3A-204ENST00000440431 ZNF396Q96N95 335 aaPredicted RBP5.39□□□□□ -1.55
SCN3A-204ENST00000440431 U3KPZ7 1027 aaPredicted RBP5.39□□□□□ -1.55
SCN3A-204ENST00000440431 CCDC196A0A1B0GTZ2 297 aa5.38□□□□□ -1.55
SCN3A-204ENST00000440431 BECN2A8MW95 431 aa5.38□□□□□ -1.55
SCN3A-204ENST00000440431 ATP6V1AP38606 617 aa5.38□□□□□ -1.55
SCN3A-204ENST00000440431 BAG6P46379 1132 aa5.38□□□□□ -1.55
SCN3A-204ENST00000440431 NFATC2IPQ8NCF5 419 aa5.38□□□□□ -1.55
SCN3A-204ENST00000440431 EYA3Q99504 573 aa5.38□□□□□ -1.55
SCN3A-204ENST00000440431 MEIS3Q99687 375 aa5.38□□□□□ -1.55
SCN3A-204ENST00000440431 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP5.38□□□□□ -1.55
SCN3A-204ENST00000440431 LY75O60449 1722 aa5.38□□□□□ -1.55
SCN3A-204ENST00000440431 ZFYP08048 801 aaPredicted RBP5.38□□□□□ -1.55
SCN3A-204ENST00000440431 HMGB1P09429 215 aaKnown RBP5.38□□□□□ -1.55
SCN3A-204ENST00000440431 IMMTQ16891 758 aaKnown RBP5.38□□□□□ -1.55
SCN3A-204ENST00000440431 ZNF772Q68DY9 489 aaPredicted RBP5.38□□□□□ -1.55
SCN3A-204ENST00000440431 KSR2Q6VAB6 950 aa5.38□□□□□ -1.55
SCN3A-204ENST00000440431 NOL8Q76FK4 1167 aaKnown RBP5.38□□□□□ -1.55
SCN3A-204ENST00000440431 SPRYD3Q8NCJ5 442 aa5.38□□□□□ -1.55
SCN3A-204ENST00000440431 AIDAQ96BJ3 306 aa5.38□□□□□ -1.55
SCN3A-204ENST00000440431 C1orf115Q9H7X2 142 aa5.38□□□□□ -1.55
SCN3A-204ENST00000440431 BTG4Q9NY30 223 aa5.38□□□□□ -1.55
SCN3A-204ENST00000440431 ANKIB1Q9P2G1 1089 aa5.38□□□□□ -1.55
SCN3A-204ENST00000440431 HDAC9Q9UKV0 1011 aa5.38□□□□□ -1.55
SCN3A-204ENST00000440431 TAF1LQ8IZX4 1826 aa5.38□□□□□ -1.55
SCN3A-204ENST00000440431 TDO2P48775 406 aa5.38□□□□□ -1.55
SCN3A-204ENST00000440431 SLC39A6Q13433 755 aa5.38□□□□□ -1.55
SCN3A-204ENST00000440431 GLIPR1L2Q4G1C9 344 aa5.38□□□□□ -1.55
SCN3A-204ENST00000440431 ZNF790Q6PG37 636 aa5.38□□□□□ -1.55
SCN3A-204ENST00000440431 LINS1Q8NG48 757 aa5.38□□□□□ -1.55
SCN3A-204ENST00000440431 UBAC1Q9BSL1 405 aa5.38□□□□□ -1.55
SCN3A-204ENST00000440431 USP44Q9H0E7 712 aa5.38□□□□□ -1.55
SCN3A-204ENST00000440431 PARP3Q9Y6F1 533 aa5.38□□□□□ -1.55
SCN3A-204ENST00000440431 BCORQ6W2J9 1755 aa5.38□□□□□ -1.55
SCN3A-204ENST00000440431 BCL9O00512 1426 aa5.38□□□□□ -1.55
SCN3A-204ENST00000440431 CCDC69A6NI79 296 aa5.38□□□□□ -1.55
SCN3A-204ENST00000440431 NBPF26B4DH59 902 aa5.38□□□□□ -1.55
SCN3A-204ENST00000440431 ERVV-2B6SEH9 535 aa5.38□□□□□ -1.55
SCN3A-204ENST00000440431 DHX8Q14562 1220 aaKnown RBP5.38□□□□□ -1.55
SCN3A-204ENST00000440431 BEND3Q5T5X7 828 aa5.38□□□□□ -1.55
SCN3A-204ENST00000440431 NBPF10Q6P3W6 841 aaKnown RBP5.38□□□□□ -1.55
SCN3A-204ENST00000440431 LDHAL6AQ6ZMR3 332 aa5.38□□□□□ -1.55
SCN3A-204ENST00000440431 NBPF15Q8N660 670 aa5.38□□□□□ -1.55
SCN3A-204ENST00000440431 ZNF496Q96IT1 587 aaPredicted RBP5.38□□□□□ -1.55
SCN3A-204ENST00000440431 NOL7Q9UMY1 257 aaKnown RBP5.38□□□□□ -1.55
SCN3A-204ENST00000440431 BRWD3Q6RI45 1802 aa5.37□□□□□ -1.55
SCN3A-204ENST00000440431 MYO1BO43795 1136 aa5.37□□□□□ -1.55
SCN3A-204ENST00000440431 ANXA1P04083 346 aa5.37□□□□□ -1.55
SCN3A-204ENST00000440431 FKBP4Q02790 459 aaKnown RBP eCLIP5.37□□□□□ -1.55
SCN3A-204ENST00000440431 CEP85Q6P2H3 762 aa5.37□□□□□ -1.55
SCN3A-204ENST00000440431 BLOC1S2Q6QNY1 142 aa5.37□□□□□ -1.55
SCN3A-204ENST00000440431 DZIP1Q86YF9 867 aaKnown RBP5.37□□□□□ -1.55
SCN3A-204ENST00000440431 ANKRD18AQ8IVF6 992 aa5.37□□□□□ -1.55
SCN3A-204ENST00000440431 ZSCAN29Q8IWY8 852 aaPredicted RBP5.37□□□□□ -1.55
SCN3A-204ENST00000440431 ANKRD2Q9GZV1 360 aa5.37□□□□□ -1.55
SCN3A-204ENST00000440431 CHPF2Q9P2E5 772 aa5.37□□□□□ -1.55
SCN3A-204ENST00000440431 TRPC5Q9UL62 973 aaPredicted RBP5.37□□□□□ -1.55
SCN3A-204ENST00000440431 USP16Q9Y5T5 823 aa5.37□□□□□ -1.55
SCN3A-204ENST00000440431 UTYO14607 1347 aa5.37□□□□□ -1.55
SCN3A-204ENST00000440431 ERBB4Q15303 1308 aa5.37□□□□□ -1.55
SCN3A-204ENST00000440431 C6orf229H3BNL8 230 aa5.37□□□□□ -1.55
SCN3A-204ENST00000440431 LETM1O95202 739 aaPredicted RBP5.37□□□□□ -1.55
SCN3A-204ENST00000440431 IPO7O95373 1038 aaKnown RBP5.37□□□□□ -1.55
SCN3A-204ENST00000440431 NUCB1Q02818 461 aa5.37□□□□□ -1.55
SCN3A-204ENST00000440431 CERS3Q8IU89 383 aa5.37□□□□□ -1.55
SCN3A-204ENST00000440431 UTP14AQ9BVJ6 771 aaKnown RBP5.37□□□□□ -1.55
SCN3A-204ENST00000440431 SIL1Q9H173 461 aa5.37□□□□□ -1.55
SCN3A-204ENST00000440431 SPATA31A1Q5TZJ5 1347 aa5.37□□□□□ -1.55
SCN3A-204ENST00000440431 NUP98P52948 1817 aa5.37□□□□□ -1.55
SCN3A-204ENST00000440431 NHSQ6T4R5 1651 aa5.37□□□□□ -1.55
SCN3A-204ENST00000440431 IL15P40933 162 aaPredicted RBP5.37□□□□□ -1.55
SCN3A-204ENST00000440431 DDX21Q9NR30 783 aaKnown RBP eCLIP5.37□□□□□ -1.55
SCN3A-204ENST00000440431 DDX49Q9Y6V7 483 aaKnown RBP5.37□□□□□ -1.55
SCN3A-204ENST00000440431 A0A1B0GUL6 1792 aa5.36□□□□□ -1.55
SCN3A-204ENST00000440431 IGKV5-2P06315 115 aa5.36□□□□□ -1.55
SCN3A-204ENST00000440431 PLCG2P16885 1265 aa5.36□□□□□ -1.55
SCN3A-204ENST00000440431 USP5P45974 858 aa5.36□□□□□ -1.55
SCN3A-204ENST00000440431 CASP7P55210 303 aa5.36□□□□□ -1.55
SCN3A-204ENST00000440431 TRAPPC3LQ5T215 181 aa5.36□□□□□ -1.55
SCN3A-204ENST00000440431 CRACR2BQ8N4Y2 399 aaPredicted RBP5.36□□□□□ -1.55
SCN3A-204ENST00000440431 USP21Q9UK80 565 aa5.36□□□□□ -1.55
SCN3A-204ENST00000440431 MAP3K2Q9Y2U5 619 aa5.36□□□□□ -1.55
SCN3A-204ENST00000440431 DDX60Q8IY21 1712 aaKnown RBP5.36□□□□□ -1.55
SCN3A-204ENST00000440431 VPS37CA5D8V6 355 aaPredicted RBP5.36□□□□□ -1.55
SCN3A-204ENST00000440431 GOLGA6L3A6NEY3 463 aa5.36□□□□□ -1.55
SCN3A-204ENST00000440431 BTAF1O14981 1849 aa5.36□□□□□ -1.55
SCN3A-204ENST00000440431 IDH1O75874 414 aaKnown RBP5.36□□□□□ -1.55
SCN3A-204ENST00000440431 POLR3DP05423 398 aaPredicted RBP5.36□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms