RNA–Protein interactions for RNA: ENST00000439555.2

IRF1-204, Transcript of interferon regulatory factor 1, humanhuman

TSL 5

Gene IRF1, Length 524 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF1-204ENST00000439555 MCOLN1Q9GZU1 580 aa14.91□□□□□ -0.02
IRF1-204ENST00000439555 VPS33BQ9H267 617 aa14.91□□□□□ -0.02
IRF1-204ENST00000439555 BRPF1P55201 1214 aaPredicted RBP14.9□□□□□ -0.02
IRF1-204ENST00000439555 GNAI1P63096 354 aa14.9□□□□□ -0.02
IRF1-204ENST00000439555 DUSP27Q5VZP5 1158 aa14.9□□□□□ -0.02
IRF1-204ENST00000439555 OLFM4Q6UX06 510 aa14.9□□□□□ -0.02
IRF1-204ENST00000439555 SAPCD2Q86UD0 394 aa14.9□□□□□ -0.02
IRF1-204ENST00000439555 NLRP10Q86W26 655 aa14.9□□□□□ -0.02
IRF1-204ENST00000439555 PLBD2Q8NHP8 589 aa14.9□□□□□ -0.02
IRF1-204ENST00000439555 NECTIN2Q92692 538 aa14.9□□□□□ -0.02
IRF1-204ENST00000439555 RBM17Q96I25 401 aaKnown RBP14.9□□□□□ -0.02
IRF1-204ENST00000439555 CHMP4AQ9BY43 222 aa14.9□□□□□ -0.02
IRF1-204ENST00000439555 MBIPQ9NS73 344 aa14.9□□□□□ -0.02
IRF1-204ENST00000439555 HYPKQ9NX55 129 aa14.9□□□□□ -0.02
IRF1-204ENST00000439555 CHPF2Q9P2E5 772 aa14.9□□□□□ -0.02
IRF1-204ENST00000439555 AKAP11Q9UKA4 1901 aa14.9□□□□□ -0.02
IRF1-204ENST00000439555 EPS15P42566 896 aa14.89□□□□□ -0.03
IRF1-204ENST00000439555 AIMP1Q12904 312 aaKnown RBP14.89□□□□□ -0.03
IRF1-204ENST00000439555 NCBP3Q53F19 620 aaKnown RBP14.89□□□□□ -0.03
IRF1-204ENST00000439555 ANKRD13DQ6ZTN6 518 aa14.89□□□□□ -0.03
IRF1-204ENST00000439555 PAXIP1Q6ZW49 1069 aaPredicted RBP14.89□□□□□ -0.03
IRF1-204ENST00000439555 PGAP2Q9UHJ9 254 aa14.89□□□□□ -0.03
IRF1-204ENST00000439555 POLR2AP24928 1970 aaKnown RBP14.88□□□□□ -0.03
IRF1-204ENST00000439555 GJA3Q9Y6H8 435 aa14.88□□□□□ -0.03
IRF1-204ENST00000439555 COL4A5P29400 1685 aa14.87□□□□□ -0.03
IRF1-204ENST00000439555 AOC2O75106 756 aa14.87□□□□□ -0.03
IRF1-204ENST00000439555 FMR1Q06787 632 aaKnown RBP eCLIP14.87□□□□□ -0.03
IRF1-204ENST00000439555 TRIM28Q13263 835 aaKnown RBP14.87□□□□□ -0.03
IRF1-204ENST00000439555 CCDC27Q2M243 656 aa14.87□□□□□ -0.03
IRF1-204ENST00000439555 ADARB2Q9NS39 739 aaKnown RBP14.87□□□□□ -0.03
IRF1-204ENST00000439555 SH3TC1Q8TE82 1336 aa14.87□□□□□ -0.03
IRF1-204ENST00000439555 BBOX1O75936 387 aa14.86□□□□□ -0.03
IRF1-204ENST00000439555 DGKZQ13574 1117 aa14.86□□□□□ -0.03
IRF1-204ENST00000439555 C3orf67Q6ZVT6 689 aa14.86□□□□□ -0.03
IRF1-204ENST00000439555 ZC3H15Q8WU90 426 aaKnown RBP14.86□□□□□ -0.03
IRF1-204ENST00000439555 ISCA1Q9BUE6 129 aa14.86□□□□□ -0.03
IRF1-204ENST00000439555 TMX4Q9H1E5 349 aaPredicted RBP14.86□□□□□ -0.03
IRF1-204ENST00000439555 TRMT112Q9UI30 125 aaKnown RBP14.86□□□□□ -0.03
IRF1-204ENST00000439555 TRAF5O00463 557 aa14.85□□□□□ -0.03
IRF1-204ENST00000439555 PPEF1O14829 653 aaPredicted RBP14.85□□□□□ -0.03
IRF1-204ENST00000439555 GRM1Q13255 1194 aa14.85□□□□□ -0.03
IRF1-204ENST00000439555 LARGE2Q8N3Y3 721 aa14.85□□□□□ -0.03
IRF1-204ENST00000439555 GPRC5DQ9NZD1 345 aa14.85□□□□□ -0.03
IRF1-204ENST00000439555 TSKSQ9UJT2 592 aa14.85□□□□□ -0.03
IRF1-204ENST00000439555 ATP6V0A2Q9Y487 856 aa14.85□□□□□ -0.03
IRF1-204ENST00000439555 ZNF316A6NFI3 1004 aaPredicted RBP14.84□□□□□ -0.03
IRF1-204ENST00000439555 CDHR2Q9BYE9 1310 aa14.84□□□□□ -0.03
IRF1-204ENST00000439555 CELF2O95319 508 aaKnown RBP14.83□□□□□ -0.04
IRF1-204ENST00000439555 NOGQ13253 232 aa14.83□□□□□ -0.04
IRF1-204ENST00000439555 CCDC184Q52MB2 194 aa14.83□□□□□ -0.04
IRF1-204ENST00000439555 TMC4Q7Z404 712 aa14.83□□□□□ -0.04
IRF1-204ENST00000439555 SP8Q8IXZ3 490 aa14.83□□□□□ -0.04
IRF1-204ENST00000439555 NIM1KQ8IY84 436 aa14.83□□□□□ -0.04
IRF1-204ENST00000439555 HCLS1P14317 486 aaPredicted RBP14.82□□□□□ -0.04
IRF1-204ENST00000439555 SF3B3Q15393 1217 aaKnown RBP14.82□□□□□ -0.04
IRF1-204ENST00000439555 CCDC30Q5VVM6 783 aa14.82□□□□□ -0.04
IRF1-204ENST00000439555 DDX46Q7L014 1031 aaKnown RBP14.82□□□□□ -0.04
IRF1-204ENST00000439555 SUPT20HQ8NEM7 779 aa14.82□□□□□ -0.04
IRF1-204ENST00000439555 RTFDC1Q9BY42 306 aaPredicted RBP14.82□□□□□ -0.04
IRF1-204ENST00000439555 ABCC4O15439 1325 aa14.82□□□□□ -0.04
IRF1-204ENST00000439555 ANP32CO43423 234 aa14.81□□□□□ -0.04
IRF1-204ENST00000439555 HSP90B1P14625 803 aaKnown RBP14.81□□□□□ -0.04
IRF1-204ENST00000439555 GOLGA2Q08379 1002 aa14.81□□□□□ -0.04
IRF1-204ENST00000439555 GRAPQ13588 217 aa14.81□□□□□ -0.04
IRF1-204ENST00000439555 CIAPIN1Q6FI81 312 aa14.81□□□□□ -0.04
IRF1-204ENST00000439555 CDC37L1Q7L3B6 337 aa14.81□□□□□ -0.04
IRF1-204ENST00000439555 WWC1Q8IX03 1113 aa14.81□□□□□ -0.04
IRF1-204ENST00000439555 C8orf58Q8NAV2 365 aa14.81□□□□□ -0.04
IRF1-204ENST00000439555 GRAPLQ8TC17 118 aaPredicted RBP14.81□□□□□ -0.04
IRF1-204ENST00000439555 SAGE1Q9NXZ1 904 aa14.81□□□□□ -0.04
IRF1-204ENST00000439555 ZNRF3Q9ULT6 936 aa14.81□□□□□ -0.04
IRF1-204ENST00000439555 IL16Q14005 1332 aa14.81□□□□□ -0.04
IRF1-204ENST00000439555 ELL2O00472 640 aaPredicted RBP14.8□□□□□ -0.04
IRF1-204ENST00000439555 CXCL9Q07325 125 aa14.8□□□□□ -0.04
IRF1-204ENST00000439555 RIC3Q7Z5B4 369 aa14.8□□□□□ -0.04
IRF1-204ENST00000439555 ANKRD36CQ5JPF3 1778 aa14.8□□□□□ -0.04
IRF1-204ENST00000439555 ATP5J2-PTCD1G3V325 749 aa14.79□□□□□ -0.04
IRF1-204ENST00000439555 DDX58O95786 925 aaKnown RBP14.79□□□□□ -0.04
IRF1-204ENST00000439555 ZBTB38Q8NAP3 1195 aaPredicted RBP14.79□□□□□ -0.04
IRF1-204ENST00000439555 CCDC191Q8NCU4 936 aa14.79□□□□□ -0.04
IRF1-204ENST00000439555 FAM89AQ96GI7 184 aa14.79□□□□□ -0.04
IRF1-204ENST00000439555 MRS2Q9HD23 443 aa14.79□□□□□ -0.04
IRF1-204ENST00000439555 TCERG1O14776 1098 aaKnown RBP14.78□□□□□ -0.04
IRF1-204ENST00000439555 PPIP5K2O43314 1243 aa14.78□□□□□ -0.04
IRF1-204ENST00000439555 PRPF38BQ5VTL8 546 aaKnown RBP14.78□□□□□ -0.04
IRF1-204ENST00000439555 DPP8Q6V1X1 898 aaPredicted RBP14.78□□□□□ -0.04
IRF1-204ENST00000439555 MPNDQ8N594 471 aa14.78□□□□□ -0.04
IRF1-204ENST00000439555 GLIS2Q9BZE0 524 aaPredicted RBP14.78□□□□□ -0.04
IRF1-204ENST00000439555 PHAXQ9H814 394 aaKnown RBP14.78□□□□□ -0.04
IRF1-204ENST00000439555 IRS4O14654 1257 aaPredicted RBP14.77□□□□□ -0.05
IRF1-204ENST00000439555 TNIP1Q15025 636 aa14.77□□□□□ -0.05
IRF1-204ENST00000439555 TSPYL6Q8N831 410 aa14.77□□□□□ -0.05
IRF1-204ENST00000439555 CCDC102AQ96A19 550 aa14.77□□□□□ -0.05
IRF1-204ENST00000439555 METTL22Q9BUU2 404 aaPredicted RBP14.77□□□□□ -0.05
IRF1-204ENST00000439555 HIRAP54198 1017 aaPredicted RBP14.76□□□□□ -0.05
IRF1-204ENST00000439555 KIAA2012Q0VF49 1180 aa14.76□□□□□ -0.05
IRF1-204ENST00000439555 WDR63Q8IWG1 891 aa14.76□□□□□ -0.05
IRF1-204ENST00000439555 LAMB2P55268 1798 aa14.75□□□□□ -0.05
IRF1-204ENST00000439555 PCCAP05165 728 aaPredicted RBP14.75□□□□□ -0.05
IRF1-204ENST00000439555 GMPSP49915 693 aaPredicted RBP14.75□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms