RNA–Protein interactions for RNA: ENST00000439027.1

AC011228.1-201, humanhuman

TSL 1 (best) BASIC

Gene AC011228.1, Length 757 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC011228.1-201ENST00000439027 RUNDC1Q96C34 613 aa11.97□□□□□ -0.49
AC011228.1-201ENST00000439027 RNF123Q5XPI4 1314 aa11.96□□□□□ -0.49
AC011228.1-201ENST00000439027 FZD9O00144 591 aa11.96□□□□□ -0.49
AC011228.1-201ENST00000439027 HSPA1AP0DMV8 641 aaKnown RBP11.96□□□□□ -0.49
AC011228.1-201ENST00000439027 HSPA1BP0DMV9 641 aaKnown RBP11.96□□□□□ -0.49
AC011228.1-201ENST00000439027 KRT24Q2M2I5 525 aa11.96□□□□□ -0.49
AC011228.1-201ENST00000439027 GRIPAP1Q4V328 841 aa11.96□□□□□ -0.49
AC011228.1-201ENST00000439027 HSP90AB3PQ58FF7 597 aa11.96□□□□□ -0.49
AC011228.1-201ENST00000439027 COL13A1Q5TAT6 717 aaPredicted RBP11.96□□□□□ -0.49
AC011228.1-201ENST00000439027 LRP10Q7Z4F1 713 aa11.96□□□□□ -0.49
AC011228.1-201ENST00000439027 FAM9BQ8IZU0 186 aa11.96□□□□□ -0.49
AC011228.1-201ENST00000439027 PCNTO95613 3336 aa11.96□□□□□ -0.5
AC011228.1-201ENST00000439027 CHL1O00533 1208 aa11.95□□□□□ -0.5
AC011228.1-201ENST00000439027 HCLS1P14317 486 aaPredicted RBP11.95□□□□□ -0.5
AC011228.1-201ENST00000439027 LMOD1P29536 600 aaPredicted RBP11.95□□□□□ -0.5
AC011228.1-201ENST00000439027 SLC10A5Q5PT55 438 aa11.95□□□□□ -0.5
AC011228.1-201ENST00000439027 SLC51AQ86UW1 340 aa11.95□□□□□ -0.5
AC011228.1-201ENST00000439027 PNMA8AQ86V59 439 aaPredicted RBP11.95□□□□□ -0.5
AC011228.1-201ENST00000439027 GPC2Q8N158 579 aa11.95□□□□□ -0.5
AC011228.1-201ENST00000439027 ZNF428Q96B54 188 aa11.95□□□□□ -0.5
AC011228.1-201ENST00000439027 FAM212AQ96EL1 285 aa11.95□□□□□ -0.5
AC011228.1-201ENST00000439027 KIF12Q96FN5 646 aa11.95□□□□□ -0.5
AC011228.1-201ENST00000439027 MS4A3Q96HJ5 214 aa11.95□□□□□ -0.5
AC011228.1-201ENST00000439027 MAP1SQ66K74 1059 aaPredicted RBP11.94□□□□□ -0.5
AC011228.1-201ENST00000439027 NLRP10Q86W26 655 aa11.94□□□□□ -0.5
AC011228.1-201ENST00000439027 NIM1KQ8IY84 436 aa11.94□□□□□ -0.5
AC011228.1-201ENST00000439027 DDX21Q9NR30 783 aaKnown RBP eCLIP11.94□□□□□ -0.5
AC011228.1-201ENST00000439027 TRMT112Q9UI30 125 aaKnown RBP11.94□□□□□ -0.5
AC011228.1-201ENST00000439027 ADAMTS8Q9UP79 889 aa11.94□□□□□ -0.5
AC011228.1-201ENST00000439027 TRIM35Q9UPQ4 493 aa11.94□□□□□ -0.5
AC011228.1-201ENST00000439027 RIC1Q4ADV7 1423 aa11.94□□□□□ -0.5
AC011228.1-201ENST00000439027 SCN4AP35499 1836 aa11.93□□□□□ -0.5
AC011228.1-201ENST00000439027 TMEM88BA6NKF7 163 aa11.93□□□□□ -0.5
AC011228.1-201ENST00000439027 PPIP5K2O43314 1243 aa11.93□□□□□ -0.5
AC011228.1-201ENST00000439027 TCIRG1Q13488 830 aa11.93□□□□□ -0.5
AC011228.1-201ENST00000439027 HDGFL1Q5TGJ6 251 aa11.93□□□□□ -0.5
AC011228.1-201ENST00000439027 DDX46Q7L014 1031 aaKnown RBP11.93□□□□□ -0.5
AC011228.1-201ENST00000439027 TNS4Q8IZW8 715 aa11.93□□□□□ -0.5
AC011228.1-201ENST00000439027 CNTROBQ8N137 903 aa11.93□□□□□ -0.5
AC011228.1-201ENST00000439027 CHPF2Q9P2E5 772 aa11.93□□□□□ -0.5
AC011228.1-201ENST00000439027 ATP6V0A2Q9Y487 856 aa11.93□□□□□ -0.5
AC011228.1-201ENST00000439027 ABCC4O15439 1325 aa11.92□□□□□ -0.5
AC011228.1-201ENST00000439027 SH3TC1Q8TE82 1336 aa11.92□□□□□ -0.5
AC011228.1-201ENST00000439027 PASKQ96RG2 1323 aa11.92□□□□□ -0.5
AC011228.1-201ENST00000439027 BBOX1O75936 387 aa11.92□□□□□ -0.5
AC011228.1-201ENST00000439027 ITGBL1O95965 494 aaPredicted RBP11.92□□□□□ -0.5
AC011228.1-201ENST00000439027 AOC3Q16853 763 aa11.92□□□□□ -0.5
AC011228.1-201ENST00000439027 DPP8Q6V1X1 898 aaPredicted RBP11.92□□□□□ -0.5
AC011228.1-201ENST00000439027 EPS15P42566 896 aa11.91□□□□□ -0.5
AC011228.1-201ENST00000439027 MPNDQ8N594 471 aa11.91□□□□□ -0.5
AC011228.1-201ENST00000439027 SUPT20HQ8NEM7 779 aa11.91□□□□□ -0.5
AC011228.1-201ENST00000439027 YTHDC1Q96MU7 727 aaKnown RBP11.91□□□□□ -0.5
AC011228.1-201ENST00000439027 SNED1Q8TER0 1413 aa11.91□□□□□ -0.5
AC011228.1-201ENST00000439027 ATP5J2-PTCD1G3V325 749 aa11.9□□□□□ -0.5
AC011228.1-201ENST00000439027 VEGFBP49765 207 aa11.9□□□□□ -0.5
AC011228.1-201ENST00000439027 DUSP27Q5VZP5 1158 aa11.9□□□□□ -0.5
AC011228.1-201ENST00000439027 ANKRD13DQ6ZTN6 518 aa11.9□□□□□ -0.5
AC011228.1-201ENST00000439027 IFNLR1Q8IU57 520 aaPredicted RBP11.9□□□□□ -0.5
AC011228.1-201ENST00000439027 SP8Q8IXZ3 490 aa11.9□□□□□ -0.5
AC011228.1-201ENST00000439027 PLBD2Q8NHP8 589 aa11.9□□□□□ -0.5
AC011228.1-201ENST00000439027 DBF4Q9UBU7 674 aaPredicted RBP11.9□□□□□ -0.5
AC011228.1-201ENST00000439027 ZNRF3Q9ULT6 936 aa11.9□□□□□ -0.5
AC011228.1-201ENST00000439027 CNTNAP1P78357 1384 aa11.9□□□□□ -0.5
AC011228.1-201ENST00000439027 MAP3K13O43283 966 aa11.89□□□□□ -0.51
AC011228.1-201ENST00000439027 HOXB7P09629 217 aa11.89□□□□□ -0.51
AC011228.1-201ENST00000439027 GRAPQ13588 217 aa11.89□□□□□ -0.51
AC011228.1-201ENST00000439027 RTL5Q5HYW3 569 aaPredicted RBP11.89□□□□□ -0.51
AC011228.1-201ENST00000439027 GRAPLQ8TC17 118 aaPredicted RBP11.89□□□□□ -0.51
AC011228.1-201ENST00000439027 AIDAQ96BJ3 306 aa11.89□□□□□ -0.51
AC011228.1-201ENST00000439027 CFAP44Q96MT7 982 aa11.89□□□□□ -0.51
AC011228.1-201ENST00000439027 VPS33BQ9H267 617 aa11.89□□□□□ -0.51
AC011228.1-201ENST00000439027 MBIPQ9NS73 344 aa11.89□□□□□ -0.51
AC011228.1-201ENST00000439027 HYPKQ9NX55 129 aa11.89□□□□□ -0.51
AC011228.1-201ENST00000439027 ABT1Q9ULW3 272 aaKnown RBP11.89□□□□□ -0.51
AC011228.1-201ENST00000439027 COL4A5P29400 1685 aa11.89□□□□□ -0.51
AC011228.1-201ENST00000439027 ELL2O00472 640 aaPredicted RBP11.88□□□□□ -0.51
AC011228.1-201ENST00000439027 APAF1O14727 1248 aa11.88□□□□□ -0.51
AC011228.1-201ENST00000439027 SCNN1DP51172 638 aa11.88□□□□□ -0.51
AC011228.1-201ENST00000439027 CXCL9Q07325 125 aa11.88□□□□□ -0.51
AC011228.1-201ENST00000439027 DEFB115Q30KQ5 88 aa11.88□□□□□ -0.51
AC011228.1-201ENST00000439027 DCAF8Q5TAQ9 597 aa11.88□□□□□ -0.51
AC011228.1-201ENST00000439027 FAM89AQ96GI7 184 aa11.88□□□□□ -0.51
AC011228.1-201ENST00000439027 RTFDC1Q9BY42 306 aaPredicted RBP11.88□□□□□ -0.51
AC011228.1-201ENST00000439027 RAD17O75943 681 aa11.87□□□□□ -0.51
AC011228.1-201ENST00000439027 GMPSP49915 693 aaPredicted RBP11.87□□□□□ -0.51
AC011228.1-201ENST00000439027 CALD1Q05682 793 aaKnown RBP11.87□□□□□ -0.51
AC011228.1-201ENST00000439027 GOLGA2Q08379 1002 aa11.87□□□□□ -0.51
AC011228.1-201ENST00000439027 CIAPIN1Q6FI81 312 aa11.87□□□□□ -0.51
AC011228.1-201ENST00000439027 PAXIP1Q6ZW49 1069 aaPredicted RBP11.87□□□□□ -0.51
AC011228.1-201ENST00000439027 USP50Q70EL3 339 aaPredicted RBP11.87□□□□□ -0.51
AC011228.1-201ENST00000439027 RIC3Q7Z5B4 369 aa11.87□□□□□ -0.51
AC011228.1-201ENST00000439027 ISCA1Q9BUE6 129 aa11.87□□□□□ -0.51
AC011228.1-201ENST00000439027 BCL2L13Q9BXK5 485 aa11.87□□□□□ -0.51
AC011228.1-201ENST00000439027 FOXN1O15353 648 aa11.86□□□□□ -0.51
AC011228.1-201ENST00000439027 GNAI1P63096 354 aa11.86□□□□□ -0.51
AC011228.1-201ENST00000439027 FMR1Q06787 632 aaKnown RBP eCLIP11.86□□□□□ -0.51
AC011228.1-201ENST00000439027 KIAA2012Q0VF49 1180 aa11.86□□□□□ -0.51
AC011228.1-201ENST00000439027 TNIP1Q15025 636 aa11.86□□□□□ -0.51
AC011228.1-201ENST00000439027 TMC4Q7Z404 712 aa11.86□□□□□ -0.51
AC011228.1-201ENST00000439027 ADARB2Q9NS39 739 aaKnown RBP11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms