RNA–Protein interactions for RNA: ENST00000438508.1

HMGN1P6-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 6, humanhuman

BASIC

Gene HMGN1P6, Length 291 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P6-201ENST00000438508 GTPBP3Q969Y2 492 aaKnown RBP9.44□□□□□ -0.9
HMGN1P6-201ENST00000438508 TBC1D2Q9BYX2 928 aa9.44□□□□□ -0.9
HMGN1P6-201ENST00000438508 AMOTL2Q9Y2J4 779 aa9.44□□□□□ -0.9
HMGN1P6-201ENST00000438508 DYRK1BQ9Y463 629 aa9.44□□□□□ -0.9
HMGN1P6-201ENST00000438508 ROBO2Q9HCK4 1378 aa9.44□□□□□ -0.9
HMGN1P6-201ENST00000438508 CPSF1Q10570 1443 aaKnown RBP9.44□□□□□ -0.9
HMGN1P6-201ENST00000438508 PTPRUQ92729 1446 aa9.44□□□□□ -0.9
HMGN1P6-201ENST00000438508 ADGRB2O60241 1585 aa9.44□□□□□ -0.9
HMGN1P6-201ENST00000438508 SIPA1L2Q9P2F8 1722 aaPredicted RBP9.44□□□□□ -0.9
HMGN1P6-201ENST00000438508 CHD2O14647 1828 aaKnown RBP9.43□□□□□ -0.9
HMGN1P6-201ENST00000438508 PIK3R2O00459 728 aa9.43□□□□□ -0.9
HMGN1P6-201ENST00000438508 HOXB4P17483 251 aaPredicted RBP9.43□□□□□ -0.9
HMGN1P6-201ENST00000438508 NUDT16Q96DE0 195 aaKnown RBP9.43□□□□□ -0.9
HMGN1P6-201ENST00000438508 GOLGA2P5Q9HBQ8 144 aa9.43□□□□□ -0.9
HMGN1P6-201ENST00000438508 NUDCQ9Y266 331 aa9.43□□□□□ -0.9
HMGN1P6-201ENST00000438508 SUPT16HQ9Y5B9 1047 aaKnown RBP9.43□□□□□ -0.9
HMGN1P6-201ENST00000438508 AKAP12Q02952 1782 aa9.42□□□□□ -0.9
HMGN1P6-201ENST00000438508 PTCH1Q13635 1447 aa9.42□□□□□ -0.9
HMGN1P6-201ENST00000438508 RNF123Q5XPI4 1314 aa9.42□□□□□ -0.9
HMGN1P6-201ENST00000438508 WDR43Q15061 677 aaKnown RBP eCLIP9.42□□□□□ -0.9
HMGN1P6-201ENST00000438508 PDXDC2PQ6P474 469 aa9.42□□□□□ -0.9
HMGN1P6-201ENST00000438508 SLC26A8Q96RN1 970 aa9.42□□□□□ -0.9
HMGN1P6-201ENST00000438508 MAP2P11137 1827 aaKnown RBP9.41□□□□□ -0.9
HMGN1P6-201ENST00000438508 MTHFSP49914 203 aa9.41□□□□□ -0.9
HMGN1P6-201ENST00000438508 SLC10A4Q96EP9 437 aa9.41□□□□□ -0.9
HMGN1P6-201ENST00000438508 XRN1Q8IZH2 1706 aaKnown RBP9.41□□□□□ -0.9
HMGN1P6-201ENST00000438508 CDC42BPGQ6DT37 1551 aa9.41□□□□□ -0.9
HMGN1P6-201ENST00000438508 KIF20BQ96Q89 1820 aa9.4□□□□□ -0.9
HMGN1P6-201ENST00000438508 LILRA1O75019 489 aa9.4□□□□□ -0.9
HMGN1P6-201ENST00000438508 C1orf229Q6ZS94 237 aaPredicted RBP9.4□□□□□ -0.9
HMGN1P6-201ENST00000438508 BEGAINQ9BUH8 593 aa9.4□□□□□ -0.9
HMGN1P6-201ENST00000438508 GDF2Q9UK05 429 aaPredicted RBP9.4□□□□□ -0.9
HMGN1P6-201ENST00000438508 EDC4Q6P2E9 1401 aaKnown RBP9.39□□□□□ -0.91
HMGN1P6-201ENST00000438508 MON2Q7Z3U7 1717 aa9.39□□□□□ -0.91
HMGN1P6-201ENST00000438508 ZNF521Q96K83 1311 aa9.39□□□□□ -0.91
HMGN1P6-201ENST00000438508 PRR36Q9H6K5 1346 aa9.39□□□□□ -0.91
HMGN1P6-201ENST00000438508 NEFLP07196 543 aa9.39□□□□□ -0.91
HMGN1P6-201ENST00000438508 CHRNA4P43681 627 aa9.39□□□□□ -0.91
HMGN1P6-201ENST00000438508 GRIN2CQ14957 1233 aa9.39□□□□□ -0.91
HMGN1P6-201ENST00000438508 ARTNQ5T4W7 220 aa9.39□□□□□ -0.91
HMGN1P6-201ENST00000438508 RIPOR1Q6ZS17 1223 aa9.39□□□□□ -0.91
HMGN1P6-201ENST00000438508 PRICKLE2Q7Z3G6 844 aa9.39□□□□□ -0.91
HMGN1P6-201ENST00000438508 CFAP53Q96M91 514 aa9.39□□□□□ -0.91
HMGN1P6-201ENST00000438508 SUV39H2Q9H5I1 410 aa9.39□□□□□ -0.91
HMGN1P6-201ENST00000438508 PPIP5K1Q6PFW1 1433 aa9.39□□□□□ -0.91
HMGN1P6-201ENST00000438508 SHPRHQ149N8 1683 aa9.39□□□□□ -0.91
HMGN1P6-201ENST00000438508 PNPLA6Q8IY17 1366 aa9.38□□□□□ -0.91
HMGN1P6-201ENST00000438508 GPC1P35052 558 aa9.38□□□□□ -0.91
HMGN1P6-201ENST00000438508 FOXD4L6Q3SYB3 417 aaPredicted RBP9.38□□□□□ -0.91
HMGN1P6-201ENST00000438508 FOXD4L3Q6VB84 417 aaPredicted RBP9.38□□□□□ -0.91
HMGN1P6-201ENST00000438508 CABLES1Q8TDN4 633 aa9.38□□□□□ -0.91
HMGN1P6-201ENST00000438508 CFHR5Q9BXR6 569 aa9.38□□□□□ -0.91
HMGN1P6-201ENST00000438508 GGNBP2Q9H3C7 697 aa9.38□□□□□ -0.91
HMGN1P6-201ENST00000438508 TOPAZ1Q8N9V7 1692 aa9.38□□□□□ -0.91
HMGN1P6-201ENST00000438508 ITSN1Q15811 1721 aa9.37□□□□□ -0.91
HMGN1P6-201ENST00000438508 GNB5O14775 395 aa9.37□□□□□ -0.91
HMGN1P6-201ENST00000438508 RHOQP17081 205 aa9.37□□□□□ -0.91
HMGN1P6-201ENST00000438508 ADD1P35611 737 aaKnown RBP9.37□□□□□ -0.91
HMGN1P6-201ENST00000438508 TRMT2AQ8IZ69 625 aaKnown RBP9.37□□□□□ -0.91
HMGN1P6-201ENST00000438508 ZNF784Q8NCA9 323 aaPredicted RBP9.37□□□□□ -0.91
HMGN1P6-201ENST00000438508 EDARADDQ8WWZ3 215 aa9.37□□□□□ -0.91
HMGN1P6-201ENST00000438508 ARHGAP9Q9BRR9 750 aa9.37□□□□□ -0.91
HMGN1P6-201ENST00000438508 ZFP64Q9NPA5 681 aa9.37□□□□□ -0.91
HMGN1P6-201ENST00000438508 AATKQ6ZMQ8 1374 aa9.37□□□□□ -0.91
HMGN1P6-201ENST00000438508 KCNA6P17658 529 aa9.36□□□□□ -0.91
HMGN1P6-201ENST00000438508 DOC2BQ14184 412 aa9.36□□□□□ -0.91
HMGN1P6-201ENST00000438508 TUSC1Q2TAM9 212 aa9.36□□□□□ -0.91
HMGN1P6-201ENST00000438508 RIC3Q7Z5B4 369 aa9.36□□□□□ -0.91
HMGN1P6-201ENST00000438508 RUNDC1Q96C34 613 aa9.36□□□□□ -0.91
HMGN1P6-201ENST00000438508 RRAGCQ9HB90 399 aa9.36□□□□□ -0.91
HMGN1P6-201ENST00000438508 RGPD8O14715 1765 aaPredicted RBP9.36□□□□□ -0.91
HMGN1P6-201ENST00000438508 CCDC27Q2M243 656 aa9.35□□□□□ -0.91
HMGN1P6-201ENST00000438508 SSH2Q76I76 1423 aa9.35□□□□□ -0.91
HMGN1P6-201ENST00000438508 ANKARQ7Z5J8 1434 aa9.35□□□□□ -0.91
HMGN1P6-201ENST00000438508 KLRG1Q96E93 195 aa9.35□□□□□ -0.91
HMGN1P6-201ENST00000438508 ACEP12821 1306 aa9.34□□□□□ -0.91
HMGN1P6-201ENST00000438508 NPHP4O75161 1426 aaPredicted RBP9.34□□□□□ -0.91
HMGN1P6-201ENST00000438508 APAF1O14727 1248 aa9.34□□□□□ -0.91
HMGN1P6-201ENST00000438508 TNNT2P45379 298 aaPredicted RBP9.34□□□□□ -0.91
HMGN1P6-201ENST00000438508 AMHR2Q16671 573 aa9.34□□□□□ -0.91
HMGN1P6-201ENST00000438508 KRTAP4-7Q9BYR0 210 aa9.34□□□□□ -0.91
HMGN1P6-201ENST00000438508 TMPRSS4Q9NRS4 437 aa9.34□□□□□ -0.91
HMGN1P6-201ENST00000438508 NOP53Q9NZM5 478 aaKnown RBP9.34□□□□□ -0.91
HMGN1P6-201ENST00000438508 POLKQ9UBT6 870 aa9.34□□□□□ -0.91
HMGN1P6-201ENST00000438508 COL3A1P02461 1466 aaPredicted RBP9.34□□□□□ -0.91
HMGN1P6-201ENST00000438508 TTC21BQ7Z4L5 1316 aa9.33□□□□□ -0.92
HMGN1P6-201ENST00000438508 SCO2A0A1W2PP80 73 aa9.33□□□□□ -0.92
HMGN1P6-201ENST00000438508 SLFN5Q08AF3 891 aa9.33□□□□□ -0.92
HMGN1P6-201ENST00000438508 WDR44Q5JSH3 913 aa9.33□□□□□ -0.92
HMGN1P6-201ENST00000438508 GIGYF2Q6Y7W6 1299 aaKnown RBP9.33□□□□□ -0.92
HMGN1P6-201ENST00000438508 GOLGA6L1Q8N7Z2 621 aa9.33□□□□□ -0.92
HMGN1P6-201ENST00000438508 PNNQ9H307 717 aaKnown RBP9.33□□□□□ -0.92
HMGN1P6-201ENST00000438508 FMN2Q9NZ56 1722 aa9.33□□□□□ -0.92
HMGN1P6-201ENST00000438508 TTC21AQ8NDW8 1320 aa9.32□□□□□ -0.92
HMGN1P6-201ENST00000438508 DIAPH1O60610 1272 aaKnown RBP9.32□□□□□ -0.92
HMGN1P6-201ENST00000438508 DUSP27Q5VZP5 1158 aa9.32□□□□□ -0.92
HMGN1P6-201ENST00000438508 WDR63Q8IWG1 891 aa9.32□□□□□ -0.92
HMGN1P6-201ENST00000438508 SUGP2Q8IX01 1082 aaKnown RBP eCLIP9.32□□□□□ -0.92
HMGN1P6-201ENST00000438508 COG3Q96JB2 828 aa9.32□□□□□ -0.92
HMGN1P6-201ENST00000438508 PLEKHF1Q96S99 279 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms