RNA–Protein interactions for RNA: ENST00000438092.6

SHPRH-206, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

TSL 1 (best) BASIC

Gene SHPRH, Length 6,994 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-206ENST00000438092 SH2B1Q9NRF2 756 aaPredicted RBP11.87□□□□□ -0.51
SHPRH-206ENST00000438092 EXOC1Q9NV70 894 aa11.87□□□□□ -0.51
SHPRH-206ENST00000438092 NSFL1CQ9UNZ2 370 aaKnown RBP11.87□□□□□ -0.51
SHPRH-206ENST00000438092 PA2G4Q9UQ80 394 aaKnown RBP11.87□□□□□ -0.51
SHPRH-206ENST00000438092 NF2P35240 595 aa11.87□□□□□ -0.51
SHPRH-206ENST00000438092 DDB1Q16531 1140 aa11.87□□□□□ -0.51
SHPRH-206ENST00000438092 TBC1D9Q6ZT07 1266 aa11.87□□□□□ -0.51
SHPRH-206ENST00000438092 NLRP3Q96P20 1036 aa11.87□□□□□ -0.51
SHPRH-206ENST00000438092 NKTRP30414 1462 aaKnown RBP11.87□□□□□ -0.51
SHPRH-206ENST00000438092 ABCC5O15440 1437 aa11.87□□□□□ -0.51
SHPRH-206ENST00000438092 HMGB2P26583 209 aaKnown RBP11.87□□□□□ -0.51
SHPRH-206ENST00000438092 AMPD3Q01432 767 aa11.87□□□□□ -0.51
SHPRH-206ENST00000438092 NAA16Q6N069 864 aaPredicted RBP11.87□□□□□ -0.51
SHPRH-206ENST00000438092 OTUD6BQ8N6M0 293 aa11.87□□□□□ -0.51
SHPRH-206ENST00000438092 TEX13AQ9BXU3 409 aaPredicted RBP11.87□□□□□ -0.51
SHPRH-206ENST00000438092 SCAND2PQ9GZW5 306 aaPredicted RBP11.87□□□□□ -0.51
SHPRH-206ENST00000438092 EFCAB5A4FU69 1503 aa11.87□□□□□ -0.51
SHPRH-206ENST00000438092 SMC1AQ14683 1233 aaKnown RBP11.87□□□□□ -0.51
SHPRH-206ENST00000438092 MTERF4Q7Z6M4 381 aaKnown RBP11.87□□□□□ -0.51
SHPRH-206ENST00000438092 TRIM47Q96LD4 638 aa11.87□□□□□ -0.51
SHPRH-206ENST00000438092 TCHPQ9BT92 498 aa11.87□□□□□ -0.51
SHPRH-206ENST00000438092 PLIN2Q99541 437 aa11.87□□□□□ -0.51
SHPRH-206ENST00000438092 INCENPQ9NQS7 918 aa11.87□□□□□ -0.51
SHPRH-206ENST00000438092 SAP30BPQ9UHR5 308 aaKnown RBP11.87□□□□□ -0.51
SHPRH-206ENST00000438092 PAFAH1B1P43034 410 aa11.86□□□□□ -0.51
SHPRH-206ENST00000438092 GSTO1P78417 241 aa11.86□□□□□ -0.51
SHPRH-206ENST00000438092 HOMER2Q9NSB8 354 aa11.86□□□□□ -0.51
SHPRH-206ENST00000438092 MRVI1Q9Y6F6 885 aa11.86□□□□□ -0.51
SHPRH-206ENST00000438092 RNF187Q5TA31 235 aaPredicted RBP11.86□□□□□ -0.51
SHPRH-206ENST00000438092 MPHOSPH6Q99547 160 aaKnown RBP11.86□□□□□ -0.51
SHPRH-206ENST00000438092 JADE2Q9NQC1 790 aa11.86□□□□□ -0.51
SHPRH-206ENST00000438092 PARP3Q9Y6F1 533 aa11.86□□□□□ -0.51
SHPRH-206ENST00000438092 MAGI1Q96QZ7 1491 aaPredicted RBP11.86□□□□□ -0.51
SHPRH-206ENST00000438092 RXRAP19793 462 aa11.86□□□□□ -0.51
SHPRH-206ENST00000438092 MARCKSP29966 332 aaPredicted RBP11.86□□□□□ -0.51
SHPRH-206ENST00000438092 PTPN23Q9H3S7 1636 aa11.86□□□□□ -0.51
SHPRH-206ENST00000438092 ZSCAN12O43309 604 aa11.86□□□□□ -0.51
SHPRH-206ENST00000438092 TOM1O60784 492 aa11.86□□□□□ -0.51
SHPRH-206ENST00000438092 ATP2B3Q16720 1220 aa11.86□□□□□ -0.51
SHPRH-206ENST00000438092 CADPS2Q86UW7 1296 aa11.86□□□□□ -0.51
SHPRH-206ENST00000438092 PTGS1P23219 599 aa11.86□□□□□ -0.51
SHPRH-206ENST00000438092 CBX1P83916 185 aa11.86□□□□□ -0.51
SHPRH-206ENST00000438092 DZIP3Q86Y13 1208 aaKnown RBP11.86□□□□□ -0.51
SHPRH-206ENST00000438092 PTPRCP08575 1304 aa11.86□□□□□ -0.51
SHPRH-206ENST00000438092 PABPN1LA6NDY0 278 aaKnown RBP11.85□□□□□ -0.51
SHPRH-206ENST00000438092 STAT6P42226 847 aa11.85□□□□□ -0.51
SHPRH-206ENST00000438092 NFATC2IPQ8NCF5 419 aa11.85□□□□□ -0.51
SHPRH-206ENST00000438092 NAPAP54920 295 aa11.85□□□□□ -0.51
SHPRH-206ENST00000438092 PRKG1Q13976 671 aa11.85□□□□□ -0.51
SHPRH-206ENST00000438092 CCDC24Q8N4L8 307 aa11.85□□□□□ -0.51
SHPRH-206ENST00000438092 TRERF1Q96PN7 1200 aa11.85□□□□□ -0.51
SHPRH-206ENST00000438092 UTP14AQ9BVJ6 771 aaKnown RBP11.85□□□□□ -0.51
SHPRH-206ENST00000438092 DMRT2Q9Y5R5 561 aa11.85□□□□□ -0.51
SHPRH-206ENST00000438092 STX6O43752 255 aa11.85□□□□□ -0.51
SHPRH-206ENST00000438092 NCAPD3P42695 1498 aa11.85□□□□□ -0.51
SHPRH-206ENST00000438092 LMBR1LQ6UX01 489 aa11.85□□□□□ -0.51
SHPRH-206ENST00000438092 SMARCC2Q8TAQ2 1214 aa11.85□□□□□ -0.51
SHPRH-206ENST00000438092 UIMC1Q96RL1 719 aa11.85□□□□□ -0.51
SHPRH-206ENST00000438092 MEIS3Q99687 375 aa11.85□□□□□ -0.51
SHPRH-206ENST00000438092 CFAP65Q6ZU64 1925 aaKnown RBP11.85□□□□□ -0.51
SHPRH-206ENST00000438092 MAGEB6Q8N7X4 407 aa11.85□□□□□ -0.51
SHPRH-206ENST00000438092 BRF1Q92994 677 aa11.85□□□□□ -0.51
SHPRH-206ENST00000438092 STAMBPO95630 424 aa11.85□□□□□ -0.51
SHPRH-206ENST00000438092 PAIP2Q9BPZ3 127 aaKnown RBP11.85□□□□□ -0.51
SHPRH-206ENST00000438092 ALG1Q9BT22 464 aa11.85□□□□□ -0.51
SHPRH-206ENST00000438092 SRRTQ9BXP5 876 aaKnown RBP11.85□□□□□ -0.51
SHPRH-206ENST00000438092 PCF11O94913 1555 aaKnown RBP11.84□□□□□ -0.51
SHPRH-206ENST00000438092 GRIPAP1Q4V328 841 aa11.84□□□□□ -0.51
SHPRH-206ENST00000438092 SLC9C2Q5TAH2 1124 aa11.84□□□□□ -0.51
SHPRH-206ENST00000438092 RRAGBQ5VZM2 374 aa11.84□□□□□ -0.51
SHPRH-206ENST00000438092 PIK3R4Q99570 1358 aa11.84□□□□□ -0.51
SHPRH-206ENST00000438092 MCM5P33992 734 aa11.84□□□□□ -0.51
SHPRH-206ENST00000438092 ZKSCAN3Q9BRR0 538 aa11.84□□□□□ -0.51
SHPRH-206ENST00000438092 STXBP4Q6ZWJ1 553 aa11.84□□□□□ -0.51
SHPRH-206ENST00000438092 MAATS1Q7Z4T9 603 aa11.84□□□□□ -0.51
SHPRH-206ENST00000438092 PDCL2Q8N4E4 241 aa11.84□□□□□ -0.51
SHPRH-206ENST00000438092 TTC21AQ8NDW8 1320 aa11.84□□□□□ -0.51
SHPRH-206ENST00000438092 ZC3H12CQ9C0D7 883 aaKnown RBP11.84□□□□□ -0.51
SHPRH-206ENST00000438092 MAGEB6P1A0A0J9YX57 407 aa11.84□□□□□ -0.51
SHPRH-206ENST00000438092 ZBTB43O43298 467 aa11.84□□□□□ -0.51
SHPRH-206ENST00000438092 RTN1Q16799 776 aa11.84□□□□□ -0.51
SHPRH-206ENST00000438092 GIMAP6Q6P9H5 292 aa11.84□□□□□ -0.51
SHPRH-206ENST00000438092 PROCA1Q8NCQ7 364 aaPredicted RBP11.84□□□□□ -0.51
SHPRH-206ENST00000438092 FAM107BQ9H098 131 aa11.84□□□□□ -0.51
SHPRH-206ENST00000438092 NCKAP5LQ9HCH0 1330 aa11.84□□□□□ -0.51
SHPRH-206ENST00000438092 POLD1P28340 1107 aa11.84□□□□□ -0.51
SHPRH-206ENST00000438092 TNPO1Q92973 898 aaKnown RBP11.84□□□□□ -0.51
SHPRH-206ENST00000438092 RTCBQ9Y3I0 505 aaKnown RBP11.84□□□□□ -0.51
SHPRH-206ENST00000438092 TICAM2Q86XR7 235 aa11.83□□□□□ -0.51
SHPRH-206ENST00000438092 KIF18AQ8NI77 898 aa11.83□□□□□ -0.51
SHPRH-206ENST00000438092 IQGAP2Q13576 1575 aa11.83□□□□□ -0.52
SHPRH-206ENST00000438092 ZNF804AQ7Z570 1209 aa11.83□□□□□ -0.52
SHPRH-206ENST00000438092 GCOM1H8Y6P7 765 aaPredicted RBP11.83□□□□□ -0.52
SHPRH-206ENST00000438092 MYZAPP0CAP1 466 aa11.83□□□□□ -0.52
SHPRH-206ENST00000438092 ZYXQ15942 572 aaKnown RBP11.83□□□□□ -0.52
SHPRH-206ENST00000438092 Q6ZUG5 572 aa11.83□□□□□ -0.52
SHPRH-206ENST00000438092 CEP63Q96MT8 703 aa11.83□□□□□ -0.52
SHPRH-206ENST00000438092 RAB3GAP1Q15042 981 aa11.83□□□□□ -0.52
SHPRH-206ENST00000438092 EIF6P56537 245 aaKnown RBP11.83□□□□□ -0.52
SHPRH-206ENST00000438092 MCM9Q9NXL9 1143 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms