RNA–Protein interactions for RNA: ENST00000437999.5

CCDC93-203, Transcript of coiled-coil domain containing 93, humanhuman

TSL 3

Gene CCDC93, Length 850 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC93-203ENST00000437999 NWD2Q9ULI1 1742 aa7.3□□□□□ -1.24
CCDC93-203ENST00000437999 RBM25P49756 843 aaKnown RBP7.3□□□□□ -1.24
CCDC93-203ENST00000437999 MFAP1P55081 439 aaKnown RBP7.3□□□□□ -1.24
CCDC93-203ENST00000437999 ZC3H6P61129 1189 aaKnown RBP7.3□□□□□ -1.24
CCDC93-203ENST00000437999 VAC14Q08AM6 782 aa7.3□□□□□ -1.24
CCDC93-203ENST00000437999 NLRP13Q86W25 1043 aa7.3□□□□□ -1.24
CCDC93-203ENST00000437999 ZNF592Q92610 1267 aa7.3□□□□□ -1.24
CCDC93-203ENST00000437999 TESK2Q96S53 571 aa7.3□□□□□ -1.24
CCDC93-203ENST00000437999 BTG4Q9NY30 223 aa7.3□□□□□ -1.24
CCDC93-203ENST00000437999 CDV3Q9UKY7 258 aaKnown RBP7.3□□□□□ -1.24
CCDC93-203ENST00000437999 AKAP12Q02952 1782 aa7.3□□□□□ -1.24
CCDC93-203ENST00000437999 COL14A1Q05707 1796 aaKnown RBP7.3□□□□□ -1.24
CCDC93-203ENST00000437999 BRD4O60885 1362 aaPredicted RBP7.3□□□□□ -1.24
CCDC93-203ENST00000437999 GLI3P10071 1580 aa7.29□□□□□ -1.24
CCDC93-203ENST00000437999 CPSF1Q10570 1443 aaKnown RBP7.29□□□□□ -1.24
CCDC93-203ENST00000437999 SSH2Q76I76 1423 aa7.29□□□□□ -1.24
CCDC93-203ENST00000437999 MCCD1P59942 119 aaPredicted RBP7.29□□□□□ -1.24
CCDC93-203ENST00000437999 CHRNA2Q15822 529 aa7.29□□□□□ -1.24
CCDC93-203ENST00000437999 VPS72Q15906 364 aa7.29□□□□□ -1.24
CCDC93-203ENST00000437999 DZIP3Q86Y13 1208 aaKnown RBP7.29□□□□□ -1.24
CCDC93-203ENST00000437999 TMC1Q8TDI8 760 aa7.29□□□□□ -1.24
CCDC93-203ENST00000437999 SLC10A4Q96EP9 437 aa7.29□□□□□ -1.24
CCDC93-203ENST00000437999 GZF1Q9H116 711 aaPredicted RBP7.29□□□□□ -1.24
CCDC93-203ENST00000437999 PRDM11Q9NQV5 511 aa7.29□□□□□ -1.24
CCDC93-203ENST00000437999 NXF1Q9UBU9 619 aaKnown RBP7.29□□□□□ -1.24
CCDC93-203ENST00000437999 KIAA0232Q92628 1395 aa7.29□□□□□ -1.24
CCDC93-203ENST00000437999 NRAPQ86VF7 1730 aa7.29□□□□□ -1.24
CCDC93-203ENST00000437999 USP19O94966 1318 aa7.28□□□□□ -1.24
CCDC93-203ENST00000437999 TTC21BQ7Z4L5 1316 aa7.28□□□□□ -1.24
CCDC93-203ENST00000437999 LOC100996750A0A140TA64 210 aa7.28□□□□□ -1.24
CCDC93-203ENST00000437999 GCP02774 474 aa7.28□□□□□ -1.24
CCDC93-203ENST00000437999 EIF4G2P78344 907 aaKnown RBP eCLIP7.28□□□□□ -1.24
CCDC93-203ENST00000437999 VASH1Q7L8A9 365 aaPredicted RBP7.28□□□□□ -1.24
CCDC93-203ENST00000437999 PUS7Q96PZ0 661 aaKnown RBP7.28□□□□□ -1.24
CCDC93-203ENST00000437999 KRTAP4-6Q9BYQ5 205 aa7.28□□□□□ -1.24
CCDC93-203ENST00000437999 SLC12A5Q9H2X9 1139 aa7.28□□□□□ -1.24
CCDC93-203ENST00000437999 KTN1Q86UP2 1357 aaKnown RBP7.28□□□□□ -1.24
CCDC93-203ENST00000437999 USP47Q96K76 1375 aa7.28□□□□□ -1.24
CCDC93-203ENST00000437999 NRKQ7Z2Y5 1582 aa7.28□□□□□ -1.24
CCDC93-203ENST00000437999 PIK3C2AO00443 1686 aa7.28□□□□□ -1.24
CCDC93-203ENST00000437999 ADH1CP00326 375 aa7.27□□□□□ -1.25
CCDC93-203ENST00000437999 SOX11P35716 441 aa7.27□□□□□ -1.25
CCDC93-203ENST00000437999 ARID5BQ14865 1188 aa7.27□□□□□ -1.25
CCDC93-203ENST00000437999 NBPF20Q3BBV1 942 aa7.27□□□□□ -1.25
CCDC93-203ENST00000437999 TRIM46Q7Z4K8 759 aa7.27□□□□□ -1.25
CCDC93-203ENST00000437999 PCDHB9Q9Y5E1 797 aa7.27□□□□□ -1.25
CCDC93-203ENST00000437999 CD163L1Q9NR16 1453 aa7.27□□□□□ -1.25
CCDC93-203ENST00000437999 MON2Q7Z3U7 1717 aa7.27□□□□□ -1.25
CCDC93-203ENST00000437999 TTC21AQ8NDW8 1320 aa7.27□□□□□ -1.25
CCDC93-203ENST00000437999 CPDO75976 1380 aa7.26□□□□□ -1.25
CCDC93-203ENST00000437999 BMP1P13497 986 aa7.26□□□□□ -1.25
CCDC93-203ENST00000437999 GRM5P41594 1212 aa7.26□□□□□ -1.25
CCDC93-203ENST00000437999 EVA1CP58658 441 aa7.26□□□□□ -1.25
CCDC93-203ENST00000437999 TMF1P82094 1093 aa7.26□□□□□ -1.25
CCDC93-203ENST00000437999 NR5A1Q13285 461 aa7.26□□□□□ -1.25
CCDC93-203ENST00000437999 TMCO4Q5TGY1 634 aa7.26□□□□□ -1.25
CCDC93-203ENST00000437999 HDGFL2Q7Z4V5 671 aaPredicted RBP7.26□□□□□ -1.25
CCDC93-203ENST00000437999 SUGP2Q8IX01 1082 aaKnown RBP eCLIP7.26□□□□□ -1.255e-6■■□□□ 14.2
CCDC93-203ENST00000437999 NPAS3Q8IXF0 933 aa7.26□□□□□ -1.25
CCDC93-203ENST00000437999 SEPT12Q8IYM1 358 aa7.26□□□□□ -1.25
CCDC93-203ENST00000437999 KCTD15Q96SI1 283 aaPredicted RBP7.26□□□□□ -1.25
CCDC93-203ENST00000437999 STRN4Q9NRL3 753 aa7.26□□□□□ -1.25
CCDC93-203ENST00000437999 BRWD3Q6RI45 1802 aa7.26□□□□□ -1.25
CCDC93-203ENST00000437999 SLIT3O75094 1523 aa7.26□□□□□ -1.25
CCDC93-203ENST00000437999 SPATA31A5Q5VU36 1347 aa7.26□□□□□ -1.25
CCDC93-203ENST00000437999 SPATA31A7Q8IWB4 1347 aa7.26□□□□□ -1.25
CCDC93-203ENST00000437999 CAMTA1Q9Y6Y1 1673 aa7.25□□□□□ -1.25
CCDC93-203ENST00000437999 A0A1W2PP64 1363 aa7.25□□□□□ -1.25
CCDC93-203ENST00000437999 LCE2CQ5TA81 110 aa7.25□□□□□ -1.25
CCDC93-203ENST00000437999 TERF2IPQ9NYB0 399 aa7.25□□□□□ -1.25
CCDC93-203ENST00000437999 LMO7Q8WWI1 1683 aa7.25□□□□□ -1.25
CCDC93-203ENST00000437999 POM121CA8CG34 1229 aa7.24□□□□□ -1.25
CCDC93-203ENST00000437999 ESPNB1AK53 854 aa7.24□□□□□ -1.25
CCDC93-203ENST00000437999 FSHRP23945 695 aa7.24□□□□□ -1.25
CCDC93-203ENST00000437999 LARP1Q6PKG0 1096 aaKnown RBP7.24□□□□□ -1.25
CCDC93-203ENST00000437999 NME9Q86XW9 330 aa7.24□□□□□ -1.25
CCDC93-203ENST00000437999 KCNH5Q8NCM2 988 aa7.24□□□□□ -1.25
CCDC93-203ENST00000437999 IRF7Q92985 503 aa7.24□□□□□ -1.25
CCDC93-203ENST00000437999 ZFP42Q96MM3 310 aa7.24□□□□□ -1.25
CCDC93-203ENST00000437999 ALG2Q9H553 416 aa7.24□□□□□ -1.25
CCDC93-203ENST00000437999 USP35Q9P2H5 1018 aa7.24□□□□□ -1.25
CCDC93-203ENST00000437999 EDC4Q6P2E9 1401 aaKnown RBP7.24□□□□□ -1.25
CCDC93-203ENST00000437999 SPATA31A1Q5TZJ5 1347 aa7.24□□□□□ -1.25
CCDC93-203ENST00000437999 COL18A1P39060 1754 aa7.23□□□□□ -1.25
CCDC93-203ENST00000437999 USP31Q70CQ4 1352 aa7.23□□□□□ -1.25
CCDC93-203ENST00000437999 NINLQ9Y2I6 1382 aa7.23□□□□□ -1.25
CCDC93-203ENST00000437999 EP400Q96L91 3159 aa7.23□□□□□ -1.25
CCDC93-203ENST00000437999 FAM181BA6NEQ2 426 aa7.23□□□□□ -1.25
CCDC93-203ENST00000437999 SEMA3FQ13275 785 aa7.23□□□□□ -1.25
CCDC93-203ENST00000437999 NNTQ13423 1086 aa7.23□□□□□ -1.25
CCDC93-203ENST00000437999 SCARF1Q14162 830 aa7.23□□□□□ -1.25
CCDC93-203ENST00000437999 KRT27Q7Z3Y8 459 aa7.23□□□□□ -1.25
CCDC93-203ENST00000437999 ARHGEF25Q86VW2 580 aa7.23□□□□□ -1.25
CCDC93-203ENST00000437999 RETREG2Q8NC44 543 aa7.23□□□□□ -1.25
CCDC93-203ENST00000437999 CEP126Q9P2H0 1117 aa7.23□□□□□ -1.25
CCDC93-203ENST00000437999 COL5A2P05997 1499 aaPredicted RBP7.23□□□□□ -1.25
CCDC93-203ENST00000437999 RGPD5Q99666 1765 aa7.23□□□□□ -1.25
CCDC93-203ENST00000437999 AATKQ6ZMQ8 1374 aa7.22□□□□□ -1.25
CCDC93-203ENST00000437999 ANKRD36BQ8N2N9 1353 aa7.22□□□□□ -1.25
CCDC93-203ENST00000437999 GIGYF1O75420 1035 aaPredicted RBP7.22□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms