RNA–Protein interactions for RNA: ENST00000436724.5

PTPRF-207, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 1 (best)

Gene PTPRF, Length 2,168 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-207ENST00000436724 IL15P40933 162 aaPredicted RBP25.73■■□□□ 1.71
PTPRF-207ENST00000436724 DBNDD2Q9BQY9 259 aa25.73■■□□□ 1.71
PTPRF-207ENST00000436724 IFIT5Q13325 482 aaKnown RBP25.72■■□□□ 1.71
PTPRF-207ENST00000436724 EIF5BO60841 1220 aaKnown RBP25.72■■□□□ 1.71
PTPRF-207ENST00000436724 MYH3P11055 1940 aa25.71■■□□□ 1.71
PTPRF-207ENST00000436724 HCLS1P14317 486 aaPredicted RBP25.71■■□□□ 1.71
PTPRF-207ENST00000436724 PDE8AO60658 829 aa25.71■■□□□ 1.71
PTPRF-207ENST00000436724 ITGA6P23229 1130 aa25.71■■□□□ 1.71
PTPRF-207ENST00000436724 TIMM10P62072 90 aa25.71■■□□□ 1.71
PTPRF-207ENST00000436724 AMIGO3Q86WK7 504 aa25.71■■□□□ 1.71
PTPRF-207ENST00000436724 GNPATO15228 680 aa25.7■■□□□ 1.7
PTPRF-207ENST00000436724 CIAO1O76071 339 aa25.7■■□□□ 1.7
PTPRF-207ENST00000436724 TAF7LQ5H9L4 462 aa25.7■■□□□ 1.7
PTPRF-207ENST00000436724 UTP14AQ9BVJ6 771 aaKnown RBP25.7■■□□□ 1.7
PTPRF-207ENST00000436724 BRWD3Q6RI45 1802 aa25.7■■□□□ 1.7
PTPRF-207ENST00000436724 SH3TC1Q8TE82 1336 aa25.69■■□□□ 1.7
PTPRF-207ENST00000436724 NEUROD6Q96NK8 337 aa25.69■■□□□ 1.7
PTPRF-207ENST00000436724 BCORQ6W2J9 1755 aa25.69■■□□□ 1.7
PTPRF-207ENST00000436724 LY75O60449 1722 aa25.69■■□□□ 1.7
PTPRF-207ENST00000436724 BCL11BQ9C0K0 894 aaPredicted RBP25.69■■□□□ 1.7
PTPRF-207ENST00000436724 NFKBIBQ15653 356 aa25.68■■□□□ 1.7
PTPRF-207ENST00000436724 RC3H1Q5TC82 1133 aaKnown RBP25.68■■□□□ 1.7
PTPRF-207ENST00000436724 ANO2Q9NQ90 1003 aa25.68■■□□□ 1.7
PTPRF-207ENST00000436724 NDUFB9Q9Y6M9 179 aa25.68■■□□□ 1.7
PTPRF-207ENST00000436724 PARP10Q53GL7 1025 aa25.68■■□□□ 1.7
PTPRF-207ENST00000436724 CWC27Q6UX04 472 aaKnown RBP25.68■■□□□ 1.7
PTPRF-207ENST00000436724 KRT27Q7Z3Y8 459 aa25.68■■□□□ 1.7
PTPRF-207ENST00000436724 EVI5LQ96CN4 794 aa25.68■■□□□ 1.7
PTPRF-207ENST00000436724 EDC3Q96F86 508 aaKnown RBP25.68■■□□□ 1.7
PTPRF-207ENST00000436724 ZNF652Q9Y2D9 606 aa25.68■■□□□ 1.7
PTPRF-207ENST00000436724 RPS6KA4O75676 772 aa25.67■■□□□ 1.7
PTPRF-207ENST00000436724 NTSR2O95665 410 aa25.67■■□□□ 1.7
PTPRF-207ENST00000436724 SRP68Q9UHB9 627 aaKnown RBP25.66■■□□□ 1.7
PTPRF-207ENST00000436724 CLEC4GQ6UXB4 293 aa25.66■■□□□ 1.7
PTPRF-207ENST00000436724 TAF1LQ8IZX4 1826 aa25.66■■□□□ 1.7
PTPRF-207ENST00000436724 ANKRD18BA2A2Z9 1011 aa25.65■■□□□ 1.7
PTPRF-207ENST00000436724 ATP5JP18859 108 aa25.65■■□□□ 1.7
PTPRF-207ENST00000436724 BICDL1Q6ZP65 573 aa25.65■■□□□ 1.7
PTPRF-207ENST00000436724 BCL2L12Q9HB09 334 aa25.65■■□□□ 1.7
PTPRF-207ENST00000436724 LRRC4BQ9NT99 713 aa25.65■■□□□ 1.7
PTPRF-207ENST00000436724 CEP126Q9P2H0 1117 aa25.65■■□□□ 1.7
PTPRF-207ENST00000436724 A0A1B0GUL7 405 aa25.65■■□□□ 1.7
PTPRF-207ENST00000436724 CD2BP2O95400 341 aaKnown RBP25.65■■□□□ 1.7
PTPRF-207ENST00000436724 USPL1Q5W0Q7 1092 aa25.65■■□□□ 1.7
PTPRF-207ENST00000436724 LDHAL6AQ6ZMR3 332 aa25.65■■□□□ 1.7
PTPRF-207ENST00000436724 GPR108Q9NPR9 543 aa25.65■■□□□ 1.7
PTPRF-207ENST00000436724 ZNF609O15014 1411 aa25.64■■□□□ 1.7
PTPRF-207ENST00000436724 SGSM2O43147 1006 aa25.64■■□□□ 1.7
PTPRF-207ENST00000436724 TRIM37O94972 964 aa25.63■■□□□ 1.69
PTPRF-207ENST00000436724 FAM196AQ6ZSG2 479 aa25.63■■□□□ 1.69
PTPRF-207ENST00000436724 DIAPH3Q9NSV4 1193 aa25.63■■□□□ 1.69
PTPRF-207ENST00000436724 FBXO3Q9UK99 471 aa25.63■■□□□ 1.69
PTPRF-207ENST00000436724 RTCBQ9Y3I0 505 aaKnown RBP25.63■■□□□ 1.69
PTPRF-207ENST00000436724 SPRYD3Q8NCJ5 442 aa25.63■■□□□ 1.69
PTPRF-207ENST00000436724 RIPOR2Q9Y4F9 1068 aa25.63■■□□□ 1.69
PTPRF-207ENST00000436724 TBC1D9BQ66K14 1250 aa25.62■■□□□ 1.69
PTPRF-207ENST00000436724 NARFQ9UHQ1 456 aa25.62■■□□□ 1.69
PTPRF-207ENST00000436724 DDX60Q8IY21 1712 aaKnown RBP25.62■■□□□ 1.69
PTPRF-207ENST00000436724 PHF14O94880 888 aa25.61■■□□□ 1.69
PTPRF-207ENST00000436724 RIC1Q4ADV7 1423 aa25.61■■□□□ 1.69
PTPRF-207ENST00000436724 ARHGEF1Q92888 912 aaKnown RBP25.61■■□□□ 1.69
PTPRF-207ENST00000436724 DNAJC2Q99543 621 aaKnown RBP25.61■■□□□ 1.69
PTPRF-207ENST00000436724 FSD1Q9BTV5 496 aa25.61■■□□□ 1.69
PTPRF-207ENST00000436724 SCN7AQ01118 1682 aa25.61■■□□□ 1.69
PTPRF-207ENST00000436724 HSCBQ8IWL3 235 aa25.61■■□□□ 1.69
PTPRF-207ENST00000436724 AK7Q96M32 723 aa25.61■■□□□ 1.69
PTPRF-207ENST00000436724 SLKQ9H2G2 1235 aaPredicted RBP25.61■■□□□ 1.69
PTPRF-207ENST00000436724 SEC31BQ9NQW1 1179 aa25.61■■□□□ 1.69
PTPRF-207ENST00000436724 CNNM1Q9NRU3 951 aa25.61■■□□□ 1.69
PTPRF-207ENST00000436724 C4BP0C0L5 1744 aa25.6■■□□□ 1.69
PTPRF-207ENST00000436724 ADORA1P30542 326 aa25.59■■□□□ 1.69
PTPRF-207ENST00000436724 METTL24Q5JXM2 366 aa25.59■■□□□ 1.69
PTPRF-207ENST00000436724 SNX21Q969T3 373 aa25.59■■□□□ 1.69
PTPRF-207ENST00000436724 FAM227BQ96M60 508 aa25.59■■□□□ 1.69
PTPRF-207ENST00000436724 PALD1Q9ULE6 856 aa25.59■■□□□ 1.69
PTPRF-207ENST00000436724 ZPR1O75312 459 aa25.59■■□□□ 1.69
PTPRF-207ENST00000436724 RBM6P78332 1123 aaKnown RBP25.59■■□□□ 1.69
PTPRF-207ENST00000436724 ERFEQ4G0M1 354 aa25.59■■□□□ 1.69
PTPRF-207ENST00000436724 ZNF772Q68DY9 489 aaPredicted RBP25.59■■□□□ 1.69
PTPRF-207ENST00000436724 HAUS7Q99871 368 aa25.58■■□□□ 1.69
PTPRF-207ENST00000436724 NMIQ13287 307 aaPredicted RBP25.57■■□□□ 1.68
PTPRF-207ENST00000436724 AKAP2Q9Y2D5 859 aa25.57■■□□□ 1.68
PTPRF-207ENST00000436724 RABEP1Q15276 862 aa25.56■■□□□ 1.68
PTPRF-207ENST00000436724 DDX46Q7L014 1031 aaKnown RBP25.56■■□□□ 1.68
PTPRF-207ENST00000436724 XAGE2Q96GT9 111 aa25.56■■□□□ 1.68
PTPRF-207ENST00000436724 LSG1Q9H089 658 aaKnown RBP25.56■■□□□ 1.68
PTPRF-207ENST00000436724 CHGBP05060 677 aa25.56■■□□□ 1.68
PTPRF-207ENST00000436724 C3orf67Q6ZVT6 689 aa25.56■■□□□ 1.68
PTPRF-207ENST00000436724 VGLL2Q8N8G2 317 aa25.55■■□□□ 1.68
PTPRF-207ENST00000436724 RUFY2Q8WXA3 655 aa25.55■■□□□ 1.68
PTPRF-207ENST00000436724 A0A0D9SFI3 127 aa25.55■■□□□ 1.68
PTPRF-207ENST00000436724 CCDC152Q4G0S7 254 aa25.55■■□□□ 1.68
PTPRF-207ENST00000436724 HELBQ8NG08 1087 aaPredicted RBP25.55■■□□□ 1.68
PTPRF-207ENST00000436724 LAMB2P55268 1798 aa25.54■■□□□ 1.68
PTPRF-207ENST00000436724 RAD50Q92878 1312 aa25.54■■□□□ 1.68
PTPRF-207ENST00000436724 ATP2B3Q16720 1220 aa25.54■■□□□ 1.68
PTPRF-207ENST00000436724 RFC4P35249 363 aa25.54■■□□□ 1.68
PTPRF-207ENST00000436724 TRAPPC3LQ5T215 181 aa25.54■■□□□ 1.68
PTPRF-207ENST00000436724 GORABQ5T7V8 394 aa25.54■■□□□ 1.68
PTPRF-207ENST00000436724 SETDB2Q96T68 719 aa25.54■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms