RNA–Protein interactions for RNA: ENST00000436461.6

CALD1-209, Transcript of caldesmon 1, humanhuman

TSL 5

Gene CALD1, Length 1,614 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-209ENST00000436461 RIC1Q4ADV7 1423 aa21.02■□□□□ 0.96
CALD1-209ENST00000436461 CHRNA5P30532 468 aa21.01■□□□□ 0.95
CALD1-209ENST00000436461 RABL6Q3YEC7 729 aaPredicted RBP21.01■□□□□ 0.95
CALD1-209ENST00000436461 CHMP4BQ9H444 224 aaKnown RBP21.01■□□□□ 0.95
CALD1-209ENST00000436461 PCDHB15Q9Y5E8 787 aa21.01■□□□□ 0.95
CALD1-209ENST00000436461 KIAA1551Q9HCM1 1747 aa21.01■□□□□ 0.95
CALD1-209ENST00000436461 SPEF2Q9C093 1822 aa21.01■□□□□ 0.95
CALD1-209ENST00000436461 PNMA6EA0A0J9YXQ4 647 aa21■□□□□ 0.95
CALD1-209ENST00000436461 CEP85Q6P2H3 762 aa21■□□□□ 0.95
CALD1-209ENST00000436461 SEC31BQ9NQW1 1179 aa21■□□□□ 0.95
CALD1-209ENST00000436461 CSF1RP07333 972 aa21■□□□□ 0.95
CALD1-209ENST00000436461 HSP90B1P14625 803 aaKnown RBP20.99■□□□□ 0.95
CALD1-209ENST00000436461 PDE6BP35913 854 aa20.99■□□□□ 0.95
CALD1-209ENST00000436461 SF3B3Q15393 1217 aaKnown RBP20.99■□□□□ 0.95
CALD1-209ENST00000436461 C2CD5Q86YS7 1000 aa20.99■□□□□ 0.95
CALD1-209ENST00000436461 CRY2Q49AN0 593 aa20.98■□□□□ 0.95
CALD1-209ENST00000436461 CCDC152Q4G0S7 254 aa20.98■□□□□ 0.95
CALD1-209ENST00000436461 SIRT2Q8IXJ6 389 aa20.98■□□□□ 0.95
CALD1-209ENST00000436461 KLHDC4Q8TBB5 520 aa20.98■□□□□ 0.95
CALD1-209ENST00000436461 WWC3Q9ULE0 1092 aa20.98■□□□□ 0.95
CALD1-209ENST00000436461 HDAC5Q9UQL6 1122 aa20.98■□□□□ 0.95
CALD1-209ENST00000436461 A0A0G2JLW4 131 aa20.97■□□□□ 0.95
CALD1-209ENST00000436461 KLRG2A4D1S0 409 aaPredicted RBP20.97■□□□□ 0.95
CALD1-209ENST00000436461 SRGAP3O43295 1099 aa20.97■□□□□ 0.95
CALD1-209ENST00000436461 ITGA6P23229 1130 aa20.97■□□□□ 0.95
CALD1-209ENST00000436461 RPGRQ92834 1020 aaKnown RBP20.97■□□□□ 0.95
CALD1-209ENST00000436461 FHDC1Q9C0D6 1143 aaPredicted RBP20.97■□□□□ 0.95
CALD1-209ENST00000436461 DLEC1Q9Y238 1755 aa20.97■□□□□ 0.95
CALD1-209ENST00000436461 SRGNP10124 158 aa20.96■□□□□ 0.95
CALD1-209ENST00000436461 DPEP1P16444 411 aa20.96■□□□□ 0.95
CALD1-209ENST00000436461 SLC51AQ86UW1 340 aa20.96■□□□□ 0.95
CALD1-209ENST00000436461 NLGN2Q8NFZ4 835 aa20.96■□□□□ 0.95
CALD1-209ENST00000436461 ZNF594Q96JF6 807 aaPredicted RBP20.96■□□□□ 0.95
CALD1-209ENST00000436461 H0YIN7 160 aa20.96■□□□□ 0.95
CALD1-209ENST00000436461 ATP8B2P98198 1209 aa20.96■□□□□ 0.95
CALD1-209ENST00000436461 ZNF622Q969S3 477 aaKnown RBP eCLIP20.96■□□□□ 0.95
CALD1-209ENST00000436461 LRP5O75197 1615 aa20.95■□□□□ 0.94
CALD1-209ENST00000436461 MTX1Q13505 466 aa20.95■□□□□ 0.94
CALD1-209ENST00000436461 CELF1Q92879 486 aaKnown RBP20.95■□□□□ 0.94
CALD1-209ENST00000436461 PA2G4Q9UQ80 394 aaKnown RBP20.95■□□□□ 0.94
CALD1-209ENST00000436461 CD2APQ9Y5K6 639 aa20.95■□□□□ 0.94
CALD1-209ENST00000436461 RFX5P48382 616 aaPredicted RBP20.94■□□□□ 0.94
CALD1-209ENST00000436461 IFIT5Q13325 482 aaKnown RBP20.94■□□□□ 0.94
CALD1-209ENST00000436461 CCDC57Q2TAC2 916 aa20.94■□□□□ 0.94
CALD1-209ENST00000436461 DDX46Q7L014 1031 aaKnown RBP20.94■□□□□ 0.94
CALD1-209ENST00000436461 KCNA3P22001 575 aa20.93■□□□□ 0.94
CALD1-209ENST00000436461 MASTLQ96GX5 879 aa20.93■□□□□ 0.94
CALD1-209ENST00000436461 BRCA1P38398 1863 aaKnown RBP20.93■□□□□ 0.94
CALD1-209ENST00000436461 ANKRD18BA2A2Z9 1011 aa20.93■□□□□ 0.94
CALD1-209ENST00000436461 NPR1P16066 1061 aa20.93■□□□□ 0.94
CALD1-209ENST00000436461 RPAP2Q8IXW5 612 aaPredicted RBP20.93■□□□□ 0.94
CALD1-209ENST00000436461 RBM17Q96I25 401 aaKnown RBP20.93■□□□□ 0.94
CALD1-209ENST00000436461 RTL9Q8NET4 1388 aa20.92■□□□□ 0.94
CALD1-209ENST00000436461 SLX4Q8IY92 1834 aa20.92■□□□□ 0.94
CALD1-209ENST00000436461 TGFB2P61812 414 aa20.92■□□□□ 0.94
CALD1-209ENST00000436461 POLA2Q14181 598 aa20.92■□□□□ 0.94
CALD1-209ENST00000436461 SIL1Q9H173 461 aa20.92■□□□□ 0.94
CALD1-209ENST00000436461 HOXA10P31260 410 aaPredicted RBP20.91■□□□□ 0.94
CALD1-209ENST00000436461 PTPN12Q05209 780 aaKnown RBP20.91■□□□□ 0.94
CALD1-209ENST00000436461 TAF7LQ5H9L4 462 aa20.91■□□□□ 0.94
CALD1-209ENST00000436461 SSH3Q8TE77 659 aa20.91■□□□□ 0.94
CALD1-209ENST00000436461 UTRNP46939 3433 aa20.91■□□□□ 0.94
CALD1-209ENST00000436461 GRAPQ13588 217 aa20.9■□□□□ 0.94
CALD1-209ENST00000436461 AAMPQ13685 434 aa20.9■□□□□ 0.94
CALD1-209ENST00000436461 GRAPLQ8TC17 118 aaPredicted RBP20.9■□□□□ 0.94
CALD1-209ENST00000436461 SYT17Q9BSW7 474 aa20.9■□□□□ 0.94
CALD1-209ENST00000436461 PUS3Q9BZE2 481 aaKnown RBP20.9■□□□□ 0.94
CALD1-209ENST00000436461 STYK1Q6J9G0 422 aa20.89■□□□□ 0.94
CALD1-209ENST00000436461 LRRC24Q50LG9 513 aa20.89■□□□□ 0.93
CALD1-209ENST00000436461 ANKRD18AQ8IVF6 992 aa20.89■□□□□ 0.93
CALD1-209ENST00000436461 CRAMP1Q96RY5 1269 aa20.89■□□□□ 0.93
CALD1-209ENST00000436461 CDC5LQ99459 802 aaKnown RBP20.89■□□□□ 0.93
CALD1-209ENST00000436461 ZNF219Q9P2Y4 722 aaPredicted RBP20.89■□□□□ 0.93
CALD1-209ENST00000436461 IGHDP01880 384 aa20.88■□□□□ 0.93
CALD1-209ENST00000436461 RPS8P62241 208 aaKnown RBP20.88■□□□□ 0.93
CALD1-209ENST00000436461 OLFM4Q6UX06 510 aa20.88■□□□□ 0.93
CALD1-209ENST00000436461 PDZRN3Q9UPQ7 1066 aa20.88■□□□□ 0.93
CALD1-209ENST00000436461 EXOC6BQ9Y2D4 811 aa20.88■□□□□ 0.93
CALD1-209ENST00000436461 IGHMBP2P38935 993 aaKnown RBP20.87■□□□□ 0.93
CALD1-209ENST00000436461 PRPF40BQ6NWY9 871 aaKnown RBP20.87■□□□□ 0.93
CALD1-209ENST00000436461 HMMRO75330 724 aa20.86■□□□□ 0.93
CALD1-209ENST00000436461 SURF6O75683 361 aaKnown RBP20.86■□□□□ 0.93
CALD1-209ENST00000436461 ALDH1B1P30837 517 aa20.86■□□□□ 0.93
CALD1-209ENST00000436461 LDHAL6AQ6ZMR3 332 aa20.86■□□□□ 0.93
CALD1-209ENST00000436461 MPHOSPH8Q99549 860 aa20.86■□□□□ 0.93
CALD1-209ENST00000436461 COPRSQ9NQ92 184 aa20.86■□□□□ 0.93
CALD1-209ENST00000436461 A0A1B0GUL6 1792 aa20.86■□□□□ 0.93
CALD1-209ENST00000436461 PPEF1O14829 653 aaPredicted RBP20.86■□□□□ 0.93
CALD1-209ENST00000436461 CNKSR1Q969H4 720 aa20.86■□□□□ 0.93
CALD1-209ENST00000436461 CNNM1Q9NRU3 951 aa20.86■□□□□ 0.93
CALD1-209ENST00000436461 PIM2Q9P1W9 311 aa20.86■□□□□ 0.93
CALD1-209ENST00000436461 APBB1O00213 710 aa20.85■□□□□ 0.93
CALD1-209ENST00000436461 B4GALNT3Q6L9W6 998 aa20.85■□□□□ 0.93
CALD1-209ENST00000436461 TTLL6Q8N841 843 aa20.85■□□□□ 0.93
CALD1-209ENST00000436461 HDAC1Q13547 482 aaPredicted RBP20.84■□□□□ 0.93
CALD1-209ENST00000436461 ATG9AQ7Z3C6 839 aa20.84■□□□□ 0.93
CALD1-209ENST00000436461 EYA2O00167 538 aa20.83■□□□□ 0.93
CALD1-209ENST00000436461 HELBQ8NG08 1087 aaPredicted RBP20.83■□□□□ 0.93
CALD1-209ENST00000436461 BCL11AQ9H165 835 aa20.83■□□□□ 0.93
CALD1-209ENST00000436461 BSDC1Q9NW68 430 aaPredicted RBP20.83■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms