RNA–Protein interactions for RNA: ENST00000436324.5

HMGN1-207, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 1,045 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-207ENST00000436324 NEXNQ0ZGT2 675 aa23.45■■□□□ 1.34
HMGN1-207ENST00000436324 FLIIQ13045 1269 aa23.45■■□□□ 1.34
HMGN1-207ENST00000436324 FKBP5Q13451 457 aaPredicted RBP23.44■■□□□ 1.34
HMGN1-207ENST00000436324 CWF19L2Q2TBE0 894 aaKnown RBP23.44■■□□□ 1.34
HMGN1-207ENST00000436324 CELF1Q92879 486 aaKnown RBP23.44■■□□□ 1.34
HMGN1-207ENST00000436324 DDX60Q8IY21 1712 aaKnown RBP23.44■■□□□ 1.34
HMGN1-207ENST00000436324 FZD9O00144 591 aa23.43■■□□□ 1.34
HMGN1-207ENST00000436324 PPIP5K2O43314 1243 aa23.43■■□□□ 1.34
HMGN1-207ENST00000436324 DPP8Q6V1X1 898 aaPredicted RBP23.43■■□□□ 1.34
HMGN1-207ENST00000436324 MPNDQ8N594 471 aa23.43■■□□□ 1.34
HMGN1-207ENST00000436324 CCDC85AQ96PX6 553 aaPredicted RBP23.43■■□□□ 1.34
HMGN1-207ENST00000436324 FSTL1Q12841 308 aa23.42■■□□□ 1.34
HMGN1-207ENST00000436324 AOC3Q16853 763 aa23.42■■□□□ 1.34
HMGN1-207ENST00000436324 SMC1BQ8NDV3 1235 aa23.42■■□□□ 1.34
HMGN1-207ENST00000436324 WDR90Q96KV7 1748 aa23.42■■□□□ 1.34
HMGN1-207ENST00000436324 ZNF521Q96K83 1311 aa23.41■■□□□ 1.34
HMGN1-207ENST00000436324 PDE8AO60658 829 aa23.41■■□□□ 1.34
HMGN1-207ENST00000436324 HSP90B1P14625 803 aaKnown RBP23.41■■□□□ 1.34
HMGN1-207ENST00000436324 EIF6P56537 245 aaKnown RBP23.41■■□□□ 1.34
HMGN1-207ENST00000436324 SEC31BQ9NQW1 1179 aa23.41■■□□□ 1.34
HMGN1-207ENST00000436324 TAF1P21675 1872 aa23.41■■□□□ 1.34
HMGN1-207ENST00000436324 NEURL1BA8MQ27 555 aa23.4■■□□□ 1.34
HMGN1-207ENST00000436324 NIM1KQ8IY84 436 aa23.4■■□□□ 1.34
HMGN1-207ENST00000436324 SUPT20HQ8NEM7 779 aa23.4■■□□□ 1.34
HMGN1-207ENST00000436324 GJA3Q9Y6H8 435 aa23.4■■□□□ 1.34
HMGN1-207ENST00000436324 COL4A5P29400 1685 aa23.4■■□□□ 1.34
HMGN1-207ENST00000436324 CCER2I3L3R5 266 aa23.39■■□□□ 1.33
HMGN1-207ENST00000436324 CCDC152Q4G0S7 254 aa23.39■■□□□ 1.33
HMGN1-207ENST00000436324 TMC4Q7Z404 712 aa23.39■■□□□ 1.33
HMGN1-207ENST00000436324 DNAAF4Q8WXU2 420 aa23.39■■□□□ 1.33
HMGN1-207ENST00000436324 APLP1P51693 650 aa23.38■■□□□ 1.33
HMGN1-207ENST00000436324 RPS8P62241 208 aaKnown RBP23.38■■□□□ 1.33
HMGN1-207ENST00000436324 L3MBTL3Q96JM7 780 aaPredicted RBP23.38■■□□□ 1.33
HMGN1-207ENST00000436324 RTFDC1Q9BY42 306 aaPredicted RBP23.38■■□□□ 1.33
HMGN1-207ENST00000436324 IQCA1LA6NCM1 817 aa23.37■■□□□ 1.33
HMGN1-207ENST00000436324 F6X3S4 739 aa23.37■■□□□ 1.33
HMGN1-207ENST00000436324 POTEIP0CG38 1075 aa23.37■■□□□ 1.33
HMGN1-207ENST00000436324 POTEJP0CG39 1038 aa23.37■■□□□ 1.33
HMGN1-207ENST00000436324 NSFL1CQ9UNZ2 370 aaKnown RBP23.37■■□□□ 1.33
HMGN1-207ENST00000436324 CDHR2Q9BYE9 1310 aa23.36■■□□□ 1.33
HMGN1-207ENST00000436324 COL4A1P02462 1669 aa23.36■■□□□ 1.33
HMGN1-207ENST00000436324 GPSM2P81274 684 aa23.36■■□□□ 1.33
HMGN1-207ENST00000436324 UBE3BQ7Z3V4 1068 aa23.36■■□□□ 1.33
HMGN1-207ENST00000436324 GPC2Q8N158 579 aa23.36■■□□□ 1.33
HMGN1-207ENST00000436324 TAF1DQ9H5J8 278 aaPredicted RBP23.36■■□□□ 1.33
HMGN1-207ENST00000436324 CTSWP56202 376 aa23.35■■□□□ 1.33
HMGN1-207ENST00000436324 HTRA3P83110 453 aa23.35■■□□□ 1.33
HMGN1-207ENST00000436324 GCKRQ14397 625 aa23.35■■□□□ 1.33
HMGN1-207ENST00000436324 EAPPQ56P03 285 aaPredicted RBP23.35■■□□□ 1.33
HMGN1-207ENST00000436324 VPS33BQ9H267 617 aa23.35■■□□□ 1.33
HMGN1-207ENST00000436324 HACL1Q9UJ83 578 aa23.35■■□□□ 1.33
HMGN1-207ENST00000436324 E9PSI1 815 aa23.34■■□□□ 1.33
HMGN1-207ENST00000436324 C6orf229H3BNL8 230 aa23.34■■□□□ 1.33
HMGN1-207ENST00000436324 H7C1W4 665 aa23.34■■□□□ 1.33
HMGN1-207ENST00000436324 KIAA2012Q0VF49 1180 aa23.33■■□□□ 1.33
HMGN1-207ENST00000436324 LINS1Q8NG48 757 aa23.33■■□□□ 1.33
HMGN1-207ENST00000436324 RIMBP2O15034 1052 aa23.32■■□□□ 1.32
HMGN1-207ENST00000436324 EPHX2P34913 555 aa23.32■■□□□ 1.32
HMGN1-207ENST00000436324 SLFN5Q08AF3 891 aa23.32■■□□□ 1.32
HMGN1-207ENST00000436324 CHADLQ6NUI6 762 aa23.32■■□□□ 1.32
HMGN1-207ENST00000436324 TTLL11Q8NHH1 800 aa23.32■■□□□ 1.32
HMGN1-207ENST00000436324 CDCA7LQ96GN5 454 aa23.32■■□□□ 1.32
HMGN1-207ENST00000436324 GPR101Q96P66 508 aaPredicted RBP23.32■■□□□ 1.32
HMGN1-207ENST00000436324 POLLQ9UGP5 575 aa23.32■■□□□ 1.32
HMGN1-207ENST00000436324 ZNRF3Q9ULT6 936 aa23.32■■□□□ 1.32
HMGN1-207ENST00000436324 WASHC4Q2M389 1173 aa23.31■■□□□ 1.32
HMGN1-207ENST00000436324 ANKRD18AQ8IVF6 992 aa23.31■■□□□ 1.32
HMGN1-207ENST00000436324 CLEC11AQ9Y240 323 aa23.31■■□□□ 1.32
HMGN1-207ENST00000436324 CXCL9Q07325 125 aa23.3■■□□□ 1.32
HMGN1-207ENST00000436324 GREM2Q9H772 168 aa23.3■■□□□ 1.32
HMGN1-207ENST00000436324 ANKIB1Q9P2G1 1089 aa23.3■■□□□ 1.32
HMGN1-207ENST00000436324 RAD17O75943 681 aa23.29■■□□□ 1.32
HMGN1-207ENST00000436324 LMOD1P29536 600 aaPredicted RBP23.29■■□□□ 1.32
HMGN1-207ENST00000436324 BEND3Q5T5X7 828 aa23.29■■□□□ 1.32
HMGN1-207ENST00000436324 SLC4A10Q6U841 1118 aa23.29■■□□□ 1.32
HMGN1-207ENST00000436324 DUOX1Q9NRD9 1551 aa23.28■■□□□ 1.32
HMGN1-207ENST00000436324 EPS15P42566 896 aa23.28■■□□□ 1.32
HMGN1-207ENST00000436324 CASP7P55210 303 aa23.28■■□□□ 1.32
HMGN1-207ENST00000436324 DIEXFQ68CQ4 756 aaKnown RBP23.28■■□□□ 1.32
HMGN1-207ENST00000436324 LDHDQ86WU2 507 aa23.28■■□□□ 1.32
HMGN1-207ENST00000436324 TBC1D16Q8TBP0 767 aa23.28■■□□□ 1.32
HMGN1-207ENST00000436324 CDC5LQ99459 802 aaKnown RBP23.28■■□□□ 1.32
HMGN1-207ENST00000436324 DBNDD1Q9H9R9 158 aa23.28■■□□□ 1.32
HMGN1-207ENST00000436324 LRRC37AA6NMS7 1700 aa23.28■■□□□ 1.32
HMGN1-207ENST00000436324 YDJCA8MPS7 323 aa23.27■■□□□ 1.32
HMGN1-207ENST00000436324 UFL1O94874 794 aa23.27■■□□□ 1.32
HMGN1-207ENST00000436324 SCNN1DP51172 638 aa23.27■■□□□ 1.32
HMGN1-207ENST00000436324 DOK7Q18PE1 504 aa23.27■■□□□ 1.32
HMGN1-207ENST00000436324 CIAPIN1Q6FI81 312 aa23.27■■□□□ 1.32
HMGN1-207ENST00000436324 MIER1Q8N108 512 aa23.27■■□□□ 1.32
HMGN1-207ENST00000436324 EYA3Q99504 573 aa23.27■■□□□ 1.32
HMGN1-207ENST00000436324 SCN4AP35499 1836 aa23.26■■□□□ 1.31
HMGN1-207ENST00000436324 MRPL50Q8N5N7 158 aaKnown RBP23.26■■□□□ 1.31
HMGN1-207ENST00000436324 PLA2G12BQ9BX93 195 aa23.26■■□□□ 1.31
HMGN1-207ENST00000436324 GGA1Q9UJY5 639 aa23.26■■□□□ 1.31
HMGN1-207ENST00000436324 CACNA1FO60840 1977 aa23.26■■□□□ 1.31
HMGN1-207ENST00000436324 GMPSP49915 693 aaPredicted RBP23.25■■□□□ 1.31
HMGN1-207ENST00000436324 PNMA8AQ86V59 439 aaPredicted RBP23.25■■□□□ 1.31
HMGN1-207ENST00000436324 PODXL2Q9NZ53 605 aa23.25■■□□□ 1.31
HMGN1-207ENST00000436324 TNIP1Q15025 636 aa23.24■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms