RNA–Protein interactions for RNA: ENST00000435986.1

HMGB1P45-201, Transcript of high mobility group box 1 pseudogene 45, humanhuman

BASIC

Gene HMGB1P45, Length 653 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P45-201ENST00000435986 ELP3Q9H9T3 547 aa7.19□□□□□ -1.26
HMGB1P45-201ENST00000435986 BRD7Q9NPI1 651 aa7.19□□□□□ -1.26
HMGB1P45-201ENST00000435986 XYLBO75191 536 aa7.18□□□□□ -1.26
HMGB1P45-201ENST00000435986 TNFRSF21O75509 655 aa7.18□□□□□ -1.26
HMGB1P45-201ENST00000435986 INSM1Q01101 510 aaPredicted RBP7.18□□□□□ -1.26
HMGB1P45-201ENST00000435986 MRPL58Q14197 206 aaKnown RBP7.18□□□□□ -1.26
HMGB1P45-201ENST00000435986 RIPOR1Q6ZS17 1223 aa7.18□□□□□ -1.26
HMGB1P45-201ENST00000435986 GMCL1Q96IK5 515 aa7.18□□□□□ -1.26
HMGB1P45-201ENST00000435986 EFCC1Q9HA90 598 aa7.18□□□□□ -1.26
HMGB1P45-201ENST00000435986 IGSF5Q9NSI5 407 aa7.18□□□□□ -1.26
HMGB1P45-201ENST00000435986 KCNH4Q9UQ05 1017 aa7.18□□□□□ -1.26
HMGB1P45-201ENST00000435986 EIF4BP23588 611 aaKnown RBP7.17□□□□□ -1.26
HMGB1P45-201ENST00000435986 TYRO3Q06418 890 aa7.17□□□□□ -1.26
HMGB1P45-201ENST00000435986 ORC1Q13415 861 aa7.17□□□□□ -1.26
HMGB1P45-201ENST00000435986 NEUROD1Q13562 356 aa7.17□□□□□ -1.26
HMGB1P45-201ENST00000435986 LAMC2Q13753 1193 aa7.17□□□□□ -1.26
HMGB1P45-201ENST00000435986 NLRP13Q86W25 1043 aa7.17□□□□□ -1.26
HMGB1P45-201ENST00000435986 VWA5B2Q8N398 1253 aa7.17□□□□□ -1.26
HMGB1P45-201ENST00000435986 PNMA5Q96PV4 448 aa7.17□□□□□ -1.26
HMGB1P45-201ENST00000435986 BACH2Q9BYV9 841 aa7.17□□□□□ -1.26
HMGB1P45-201ENST00000435986 SRCIN1Q9C0H9 1055 aa7.17□□□□□ -1.26
HMGB1P45-201ENST00000435986 METTL5Q9NRN9 209 aaKnown RBP7.17□□□□□ -1.26
HMGB1P45-201ENST00000435986 ABI2Q9NYB9 513 aaPredicted RBP7.17□□□□□ -1.26
HMGB1P45-201ENST00000435986 WWC3Q9ULE0 1092 aa7.17□□□□□ -1.26
HMGB1P45-201ENST00000435986 AK5Q9Y6K8 562 aa7.17□□□□□ -1.26
HMGB1P45-201ENST00000435986 ATXN7O15265 892 aaPredicted RBP7.16□□□□□ -1.26
HMGB1P45-201ENST00000435986 RECKO95980 971 aa7.16□□□□□ -1.26
HMGB1P45-201ENST00000435986 EGFRP00533 1210 aa7.16□□□□□ -1.26
HMGB1P45-201ENST00000435986 RNFT1Q5M7Z0 435 aa7.16□□□□□ -1.26
HMGB1P45-201ENST00000435986 ZNF837Q96EG3 531 aaPredicted RBP7.16□□□□□ -1.26
HMGB1P45-201ENST00000435986 ZFYVE28Q9HCC9 887 aa7.16□□□□□ -1.26
HMGB1P45-201ENST00000435986 PCDHGC4Q9Y5F7 938 aa7.16□□□□□ -1.26
HMGB1P45-201ENST00000435986 CDC14CA4D256 554 aa7.15□□□□□ -1.26
HMGB1P45-201ENST00000435986 PHF20L1A8MW92 1017 aa7.15□□□□□ -1.26
HMGB1P45-201ENST00000435986 THBS1P07996 1170 aa7.15□□□□□ -1.26
HMGB1P45-201ENST00000435986 FAM157BP0CG42 384 aa7.15□□□□□ -1.26
HMGB1P45-201ENST00000435986 ERCC5P28715 1186 aaPredicted RBP7.15□□□□□ -1.26
HMGB1P45-201ENST00000435986 KCNQ4P56696 695 aa7.15□□□□□ -1.26
HMGB1P45-201ENST00000435986 ZC3H6P61129 1189 aaKnown RBP7.15□□□□□ -1.26
HMGB1P45-201ENST00000435986 FOXR1Q6PIV2 292 aa7.15□□□□□ -1.26
HMGB1P45-201ENST00000435986 SV2AQ7L0J3 742 aa7.15□□□□□ -1.26
HMGB1P45-201ENST00000435986 TRIM22Q8IYM9 498 aa7.15□□□□□ -1.26
HMGB1P45-201ENST00000435986 ZSCAN1Q8NBB4 408 aa7.15□□□□□ -1.26
HMGB1P45-201ENST00000435986 RNF34Q969K3 372 aa7.15□□□□□ -1.26
HMGB1P45-201ENST00000435986 CCDC74AQ96AQ1 378 aa7.15□□□□□ -1.26
HMGB1P45-201ENST00000435986 CRELD1Q96HD1 420 aa7.15□□□□□ -1.26
HMGB1P45-201ENST00000435986 COL25A1Q9BXS0 654 aaPredicted RBP7.15□□□□□ -1.26
HMGB1P45-201ENST00000435986 NUCKS1Q9H1E3 243 aaKnown RBP7.15□□□□□ -1.26
HMGB1P45-201ENST00000435986 PHF24Q9UPV7 400 aa7.15□□□□□ -1.26
HMGB1P45-201ENST00000435986 KCNMB2Q9Y691 235 aa7.15□□□□□ -1.26
HMGB1P45-201ENST00000435986 A6NHS1 94 aa7.14□□□□□ -1.27
HMGB1P45-201ENST00000435986 GADD45BO75293 160 aaPredicted RBP7.14□□□□□ -1.27
HMGB1P45-201ENST00000435986 EDN3P14138 238 aa7.14□□□□□ -1.27
HMGB1P45-201ENST00000435986 CES1P23141 567 aa7.14□□□□□ -1.27
HMGB1P45-201ENST00000435986 CCINQ13939 588 aa7.14□□□□□ -1.27
HMGB1P45-201ENST00000435986 DBN1Q16643 649 aa7.14□□□□□ -1.27
HMGB1P45-201ENST00000435986 FAM161BQ96MY7 647 aa7.14□□□□□ -1.27
HMGB1P45-201ENST00000435986 C8orf37Q96NL8 207 aa7.14□□□□□ -1.27
HMGB1P45-201ENST00000435986 USP35Q9P2H5 1018 aa7.14□□□□□ -1.27
HMGB1P45-201ENST00000435986 STK17AQ9UEE5 414 aa7.14□□□□□ -1.27
HMGB1P45-201ENST00000435986 USP20Q9Y2K6 914 aa7.14□□□□□ -1.27
HMGB1P45-201ENST00000435986 KHNYNO15037 678 aaKnown RBP7.13□□□□□ -1.27
HMGB1P45-201ENST00000435986 ZNF76P36508 570 aa7.13□□□□□ -1.27
HMGB1P45-201ENST00000435986 GAS6Q14393 721 aa7.13□□□□□ -1.27
HMGB1P45-201ENST00000435986 LARP7Q4G0J3 582 aaKnown RBP eCLIP7.13□□□□□ -1.27
HMGB1P45-201ENST00000435986 ZCCHC2Q9C0B9 1178 aaKnown RBP7.13□□□□□ -1.27
HMGB1P45-201ENST00000435986 FAM8A1Q9UBU6 413 aa7.13□□□□□ -1.27
HMGB1P45-201ENST00000435986 FOXD3Q9UJU5 478 aaPredicted RBP7.13□□□□□ -1.27
HMGB1P45-201ENST00000435986 TRAK1Q9UPV9 953 aa7.13□□□□□ -1.27
HMGB1P45-201ENST00000435986 PSAPP07602 524 aa7.12□□□□□ -1.27
HMGB1P45-201ENST00000435986 GNL2Q13823 731 aaKnown RBP7.12□□□□□ -1.27
HMGB1P45-201ENST00000435986 TRIP4Q15650 581 aaPredicted RBP7.12□□□□□ -1.27
HMGB1P45-201ENST00000435986 CNTNAP3BQ96NU0 1288 aa7.12□□□□□ -1.27
HMGB1P45-201ENST00000435986 CNTNAP3Q9BZ76 1288 aa7.12□□□□□ -1.27
HMGB1P45-201ENST00000435986 C12orf49Q9H741 205 aa7.12□□□□□ -1.27
HMGB1P45-201ENST00000435986 ZFYVE1Q9HBF4 777 aa7.12□□□□□ -1.27
HMGB1P45-201ENST00000435986 MARK1Q9P0L2 795 aa7.12□□□□□ -1.27
HMGB1P45-201ENST00000435986 RARAP10276 462 aa7.11□□□□□ -1.27
HMGB1P45-201ENST00000435986 GALNT12Q8IXK2 581 aa7.11□□□□□ -1.27
HMGB1P45-201ENST00000435986 TRERF1Q96PN7 1200 aa7.11□□□□□ -1.27
HMGB1P45-201ENST00000435986 TMEM63CQ9P1W3 806 aa7.11□□□□□ -1.27
HMGB1P45-201ENST00000435986 UBAP2LQ14157 1087 aaKnown RBP7.1□□□□□ -1.27
HMGB1P45-201ENST00000435986 SF3A1Q15459 793 aaKnown RBP7.1□□□□□ -1.27
HMGB1P45-201ENST00000435986 PCSK7Q16549 785 aa7.1□□□□□ -1.27
HMGB1P45-201ENST00000435986 SPACA7Q96KW9 195 aa7.1□□□□□ -1.27
HMGB1P45-201ENST00000435986 SETDB2Q96T68 719 aa7.1□□□□□ -1.27
HMGB1P45-201ENST00000435986 ATXN7L1Q9ULK2 861 aaPredicted RBP7.1□□□□□ -1.27
HMGB1P45-201ENST00000435986 GPR25O00155 361 aa7.09□□□□□ -1.27
HMGB1P45-201ENST00000435986 SASH3O75995 380 aa7.09□□□□□ -1.27
HMGB1P45-201ENST00000435986 SLURP2P0DP57 97 aa7.09□□□□□ -1.27
HMGB1P45-201ENST00000435986 GSTT1P30711 240 aa7.09□□□□□ -1.27
HMGB1P45-201ENST00000435986 HS2ST1Q7LGA3 356 aa7.09□□□□□ -1.27
HMGB1P45-201ENST00000435986 C1orf127Q8N9H9 656 aa7.09□□□□□ -1.27
HMGB1P45-201ENST00000435986 EPS8L3Q8TE67 593 aaKnown RBP7.09□□□□□ -1.27
HMGB1P45-201ENST00000435986 GTPBP3Q969Y2 492 aaKnown RBP7.09□□□□□ -1.27
HMGB1P45-201ENST00000435986 CFHR5Q9BXR6 569 aa7.09□□□□□ -1.27
HMGB1P45-201ENST00000435986 GSX2Q9BZM3 304 aa7.09□□□□□ -1.27
HMGB1P45-201ENST00000435986 CCSER2Q9H7U1 834 aa7.09□□□□□ -1.27
HMGB1P45-201ENST00000435986 NPHS2Q9NP85 383 aa7.09□□□□□ -1.27
HMGB1P45-201ENST00000435986 GTF3C5Q9Y5Q8 519 aaPredicted RBP7.09□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms