RNA–Protein interactions for RNA: ENST00000435747.2

CPNE1-214, Transcript of copine 1, humanhuman

TSL 3

Gene CPNE1, Length 400 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-214ENST00000435747 RIC1Q4ADV7 1423 aa14□□□□□ -0.17
CPNE1-214ENST00000435747 FKTNO75072 461 aa14□□□□□ -0.17
CPNE1-214ENST00000435747 SAMD7Q7Z3H4 446 aa14□□□□□ -0.17
CPNE1-214ENST00000435747 NUTM1Q86Y26 1132 aa14□□□□□ -0.17
CPNE1-214ENST00000435747 CRAMP1Q96RY5 1269 aa14□□□□□ -0.17
CPNE1-214ENST00000435747 COL3A1P02461 1466 aaPredicted RBP13.99□□□□□ -0.17
CPNE1-214ENST00000435747 SIPA1L3O60292 1781 aaPredicted RBP13.99□□□□□ -0.17
CPNE1-214ENST00000435747 HMOX1P09601 288 aa13.99□□□□□ -0.17
CPNE1-214ENST00000435747 TBC1D10BQ4KMP7 808 aaPredicted RBP13.99□□□□□ -0.17
CPNE1-214ENST00000435747 SULF1Q8IWU6 871 aa13.98□□□□□ -0.17
CPNE1-214ENST00000435747 USP16Q9Y5T5 823 aa13.98□□□□□ -0.17
CPNE1-214ENST00000435747 EN2P19622 333 aaPredicted RBP13.97□□□□□ -0.17
CPNE1-214ENST00000435747 KIAA2012Q0VF49 1180 aa13.97□□□□□ -0.17
CPNE1-214ENST00000435747 CDCA5Q96FF9 252 aa13.97□□□□□ -0.17
CPNE1-214ENST00000435747 RTFDC1Q9BY42 306 aaPredicted RBP13.97□□□□□ -0.17
CPNE1-214ENST00000435747 ZBTB12Q9Y330 459 aaPredicted RBP13.97□□□□□ -0.17
CPNE1-214ENST00000435747 ATP6V0A2Q9Y487 856 aa13.97□□□□□ -0.17
CPNE1-214ENST00000435747 PRAMEF22A3QJZ6 481 aa13.96□□□□□ -0.17
CPNE1-214ENST00000435747 MNX1P50219 401 aaPredicted RBP13.96□□□□□ -0.17
CPNE1-214ENST00000435747 HLFQ16534 295 aa13.96□□□□□ -0.17
CPNE1-214ENST00000435747 RBM26Q5T8P6 1007 aaKnown RBP13.96□□□□□ -0.17
CPNE1-214ENST00000435747 DPP8Q6V1X1 898 aaPredicted RBP13.96□□□□□ -0.17
CPNE1-214ENST00000435747 DPF2Q92785 391 aa13.96□□□□□ -0.17
CPNE1-214ENST00000435747 OTUD5Q96G74 571 aa13.96□□□□□ -0.17
CPNE1-214ENST00000435747 TRIM17Q9Y577 477 aa13.96□□□□□ -0.17
CPNE1-214ENST00000435747 NUP98P52948 1817 aa13.95□□□□□ -0.18
CPNE1-214ENST00000435747 EGFRP00533 1210 aa13.95□□□□□ -0.18
CPNE1-214ENST00000435747 YDJCA8MPS7 323 aa13.94□□□□□ -0.18
CPNE1-214ENST00000435747 H0YGN5 161 aa13.94□□□□□ -0.18
CPNE1-214ENST00000435747 KCNQ3O43525 872 aa13.94□□□□□ -0.18
CPNE1-214ENST00000435747 TM4SF4P48230 202 aa13.94□□□□□ -0.18
CPNE1-214ENST00000435747 FKBP1BP68106 108 aa13.94□□□□□ -0.18
CPNE1-214ENST00000435747 CC2D1BQ5T0F9 858 aaKnown RBP13.94□□□□□ -0.18
CPNE1-214ENST00000435747 CHRDL2Q6WN34 429 aa13.94□□□□□ -0.18
CPNE1-214ENST00000435747 MPNDQ8N594 471 aa13.94□□□□□ -0.18
CPNE1-214ENST00000435747 IL17REQ8NFR9 667 aa13.94□□□□□ -0.18
CPNE1-214ENST00000435747 GGA3Q9NZ52 723 aa13.94□□□□□ -0.18
CPNE1-214ENST00000435747 BTBD11A6QL63 1104 aa13.93□□□□□ -0.18
CPNE1-214ENST00000435747 GNAT3A8MTJ3 354 aa13.92□□□□□ -0.18
CPNE1-214ENST00000435747 NBPF26B4DH59 902 aa13.92□□□□□ -0.18
CPNE1-214ENST00000435747 PSMD14O00487 310 aa13.92□□□□□ -0.18
CPNE1-214ENST00000435747 SREBF2Q12772 1141 aa13.92□□□□□ -0.18
CPNE1-214ENST00000435747 KIF4BQ2VIQ3 1234 aa13.92□□□□□ -0.18
CPNE1-214ENST00000435747 NBPF10Q6P3W6 841 aaKnown RBP13.92□□□□□ -0.18
CPNE1-214ENST00000435747 OTOP1Q7RTM1 612 aa13.92□□□□□ -0.18
CPNE1-214ENST00000435747 TMEM106CQ9BVX2 250 aa13.92□□□□□ -0.18
CPNE1-214ENST00000435747 CFHR5Q9BXR6 569 aa13.92□□□□□ -0.18
CPNE1-214ENST00000435747 IBTKQ9P2D0 1353 aaPredicted RBP13.92□□□□□ -0.18
CPNE1-214ENST00000435747 PITPNM2Q9BZ72 1349 aa13.91□□□□□ -0.18
CPNE1-214ENST00000435747 SNRPA1P09661 255 aaKnown RBP13.91□□□□□ -0.18
CPNE1-214ENST00000435747 RPS12P25398 132 aaKnown RBP13.91□□□□□ -0.18
CPNE1-214ENST00000435747 R3HDMLQ9H3Y0 253 aa13.91□□□□□ -0.18
CPNE1-214ENST00000435747 MKRN3Q13064 507 aaKnown RBP13.9□□□□□ -0.18
CPNE1-214ENST00000435747 C3orf67Q6ZVT6 689 aa13.9□□□□□ -0.18
CPNE1-214ENST00000435747 GAS2L2Q8NHY3 880 aa13.9□□□□□ -0.18
CPNE1-214ENST00000435747 ARMC5Q96C12 935 aa13.9□□□□□ -0.18
CPNE1-214ENST00000435747 NLRP3Q96P20 1036 aa13.9□□□□□ -0.18
CPNE1-214ENST00000435747 RBM27Q9P2N5 1060 aaKnown RBP13.9□□□□□ -0.18
CPNE1-214ENST00000435747 ABCC4O15439 1325 aa13.9□□□□□ -0.19
CPNE1-214ENST00000435747 UBE2Q2LH0YL09 131 aa13.89□□□□□ -0.19
CPNE1-214ENST00000435747 DIAPH1O60610 1272 aaKnown RBP13.89□□□□□ -0.19
CPNE1-214ENST00000435747 GPTP24298 496 aa13.89□□□□□ -0.19
CPNE1-214ENST00000435747 MOB2Q70IA6 237 aa13.89□□□□□ -0.19
CPNE1-214ENST00000435747 SP8Q8IXZ3 490 aa13.89□□□□□ -0.19
CPNE1-214ENST00000435747 PTPN22Q9Y2R2 807 aa13.89□□□□□ -0.19
CPNE1-214ENST00000435747 ASTN2O75129 1339 aaPredicted RBP13.89□□□□□ -0.19
CPNE1-214ENST00000435747 BBOX1O75936 387 aa13.88□□□□□ -0.19
CPNE1-214ENST00000435747 SUSD4Q5VX71 490 aa13.88□□□□□ -0.19
CPNE1-214ENST00000435747 UNC80Q8N2C7 3258 aa13.88□□□□□ -0.19
CPNE1-214ENST00000435747 LAMA3Q16787 3333 aa13.88□□□□□ -0.19
CPNE1-214ENST00000435747 UBN2Q6ZU65 1347 aa13.88□□□□□ -0.19
CPNE1-214ENST00000435747 ERVV-1B6SEH8 477 aa13.87□□□□□ -0.19
CPNE1-214ENST00000435747 ALDH1A1P00352 501 aa13.87□□□□□ -0.19
CPNE1-214ENST00000435747 TTLL12Q14166 644 aaPredicted RBP13.87□□□□□ -0.19
CPNE1-214ENST00000435747 ANGEL2Q5VTE6 544 aaKnown RBP13.87□□□□□ -0.19
CPNE1-214ENST00000435747 NGEFQ8N5V2 710 aa13.87□□□□□ -0.19
CPNE1-214ENST00000435747 DBNDD1Q9H9R9 158 aa13.87□□□□□ -0.19
CPNE1-214ENST00000435747 MAP3K15Q6ZN16 1313 aa13.87□□□□□ -0.19
CPNE1-214ENST00000435747 CEMIPQ8WUJ3 1361 aa13.86□□□□□ -0.19
CPNE1-214ENST00000435747 NTSR2O95665 410 aa13.86□□□□□ -0.19
CPNE1-214ENST00000435747 KIF6Q6ZMV9 814 aa13.86□□□□□ -0.19
CPNE1-214ENST00000435747 ERO1AQ96HE7 468 aa13.86□□□□□ -0.19
CPNE1-214ENST00000435747 DDX60Q8IY21 1712 aaKnown RBP13.85□□□□□ -0.19
CPNE1-214ENST00000435747 DUOX1Q9NRD9 1551 aa13.85□□□□□ -0.19
CPNE1-214ENST00000435747 SCARF1Q14162 830 aa13.85□□□□□ -0.19
CPNE1-214ENST00000435747 WASHC4Q2M389 1173 aa13.85□□□□□ -0.19
CPNE1-214ENST00000435747 PPP1R42Q7Z4L9 355 aa13.85□□□□□ -0.19
CPNE1-214ENST00000435747 TCIRG1Q13488 830 aa13.84□□□□□ -0.19
CPNE1-214ENST00000435747 SLC4A8Q2Y0W8 1093 aa13.84□□□□□ -0.19
CPNE1-214ENST00000435747 LAMB2P55268 1798 aa13.83□□□□□ -0.19
CPNE1-214ENST00000435747 ANKRD36CQ5JPF3 1778 aa13.83□□□□□ -0.19
CPNE1-214ENST00000435747 ZNF609O15014 1411 aa13.83□□□□□ -0.2
CPNE1-214ENST00000435747 TAF1P21675 1872 aa13.83□□□□□ -0.2
CPNE1-214ENST00000435747 RIMBP2O15034 1052 aa13.83□□□□□ -0.2
CPNE1-214ENST00000435747 ECE2O60344 883 aa13.83□□□□□ -0.2
CPNE1-214ENST00000435747 PPP2R1AP30153 589 aa13.83□□□□□ -0.2
CPNE1-214ENST00000435747 CD99L2Q8TCZ2 262 aa13.83□□□□□ -0.2
CPNE1-214ENST00000435747 DPF3Q92784 378 aa13.83□□□□□ -0.2
CPNE1-214ENST00000435747 ZNF333Q96JL9 665 aa13.83□□□□□ -0.2
CPNE1-214ENST00000435747 EFCC1Q9HA90 598 aa13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 79.6 ms