RNA–Protein interactions for RNA: ENST00000435532.7

NEDD4-202, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NEDD4, Length 5,869 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-202ENST00000435532 NUP62CLQ9H1M0 184 aa18.12■□□□□ 0.49
NEDD4-202ENST00000435532 SLC52A2Q9HAB3 445 aa18.12■□□□□ 0.49
NEDD4-202ENST00000435532 NASPP49321 788 aaPredicted RBP18.11■□□□□ 0.49
NEDD4-202ENST00000435532 CCDC148Q8NFR7 591 aa18.11■□□□□ 0.49
NEDD4-202ENST00000435532 TCP11L1Q9NUJ3 509 aa18.11■□□□□ 0.49
NEDD4-202ENST00000435532 GGA1Q9UJY5 639 aa18.11■□□□□ 0.49
NEDD4-202ENST00000435532 TMEM94Q12767 1356 aa18.11■□□□□ 0.49
NEDD4-202ENST00000435532 PLEKHG3A1L390 1219 aa18.11■□□□□ 0.49
NEDD4-202ENST00000435532 ERLIN2O94905 339 aa18.11■□□□□ 0.49
NEDD4-202ENST00000435532 CCDC82Q8N4S0 544 aa18.11■□□□□ 0.49
NEDD4-202ENST00000435532 VTI1AQ96AJ9 217 aa18.11■□□□□ 0.49
NEDD4-202ENST00000435532 IQSEC3Q9UPP2 1182 aaPredicted RBP18.11■□□□□ 0.49
NEDD4-202ENST00000435532 SH3TC1Q8TE82 1336 aa18.11■□□□□ 0.49
NEDD4-202ENST00000435532 HOXB7P09629 217 aa18.11■□□□□ 0.49
NEDD4-202ENST00000435532 RXRBP28702 533 aa18.11■□□□□ 0.49
NEDD4-202ENST00000435532 LIMCH1Q9UPQ0 1083 aa18.11■□□□□ 0.49
NEDD4-202ENST00000435532 UFL1O94874 794 aa18.11■□□□□ 0.49
NEDD4-202ENST00000435532 IFIT1BQ5T764 474 aaKnown RBP18.11■□□□□ 0.49
NEDD4-202ENST00000435532 NEK1Q96PY6 1258 aa18.11■□□□□ 0.49
NEDD4-202ENST00000435532 ERVV-2B6SEH9 535 aa18.11■□□□□ 0.49
NEDD4-202ENST00000435532 ALDH1B1P30837 517 aa18.11■□□□□ 0.49
NEDD4-202ENST00000435532 QTRT2Q9H974 415 aaKnown RBP18.11■□□□□ 0.49
NEDD4-202ENST00000435532 SAMM50Q9Y512 469 aa18.11■□□□□ 0.49
NEDD4-202ENST00000435532 SLC4A8Q2Y0W8 1093 aa18.1■□□□□ 0.49
NEDD4-202ENST00000435532 ERCC4Q92889 916 aaPredicted RBP18.1■□□□□ 0.49
NEDD4-202ENST00000435532 C8orf58Q8NAV2 365 aa18.1■□□□□ 0.49
NEDD4-202ENST00000435532 ZNF397Q8NF99 534 aaPredicted RBP18.1■□□□□ 0.49
NEDD4-202ENST00000435532 ERMNQ8TAM6 284 aa18.1■□□□□ 0.49
NEDD4-202ENST00000435532 USP16Q9Y5T5 823 aa18.1■□□□□ 0.49
NEDD4-202ENST00000435532 MRE11P49959 708 aa18.1■□□□□ 0.49
NEDD4-202ENST00000435532 RNF214Q8ND24 703 aa18.1■□□□□ 0.49
NEDD4-202ENST00000435532 UGGT1Q9NYU2 1555 aa18.1■□□□□ 0.49
NEDD4-202ENST00000435532 UBA5Q9GZZ9 404 aa18.1■□□□□ 0.49
NEDD4-202ENST00000435532 NLRP1Q9C000 1473 aa18.09■□□□□ 0.49
NEDD4-202ENST00000435532 WWC3Q9ULE0 1092 aa18.09■□□□□ 0.49
NEDD4-202ENST00000435532 LTKP29376 864 aa18.09■□□□□ 0.49
NEDD4-202ENST00000435532 EIF5P55010 431 aaKnown RBP18.09■□□□□ 0.49
NEDD4-202ENST00000435532 SLC9C2Q5TAH2 1124 aa18.09■□□□□ 0.49
NEDD4-202ENST00000435532 CERS3Q8IU89 383 aa18.09■□□□□ 0.49
NEDD4-202ENST00000435532 PDE8AO60658 829 aa18.09■□□□□ 0.49
NEDD4-202ENST00000435532 SCAND2PQ9GZW5 306 aaPredicted RBP18.09■□□□□ 0.49
NEDD4-202ENST00000435532 PLXNC1O60486 1568 aa18.09■□□□□ 0.49
NEDD4-202ENST00000435532 TTC6Q86TZ1 520 aa18.09■□□□□ 0.49
NEDD4-202ENST00000435532 DRC1Q96MC2 740 aa18.09■□□□□ 0.49
NEDD4-202ENST00000435532 BEGAINQ9BUH8 593 aa18.09■□□□□ 0.49
NEDD4-202ENST00000435532 ADGBQ8N7X0 1667 aa18.09■□□□□ 0.49
NEDD4-202ENST00000435532 HAND2P61296 217 aa18.08■□□□□ 0.49
NEDD4-202ENST00000435532 CETN2P41208 172 aa18.08■□□□□ 0.48
NEDD4-202ENST00000435532 MCMDC2Q4G0Z9 681 aa18.08■□□□□ 0.48
NEDD4-202ENST00000435532 DPP8Q6V1X1 898 aaPredicted RBP18.08■□□□□ 0.48
NEDD4-202ENST00000435532 CCDC191Q8NCU4 936 aa18.08■□□□□ 0.48
NEDD4-202ENST00000435532 ABCA8O94911 1581 aa18.08■□□□□ 0.48
NEDD4-202ENST00000435532 FKBP15Q5T1M5 1219 aa18.08■□□□□ 0.48
NEDD4-202ENST00000435532 LARGE2Q8N3Y3 721 aa18.08■□□□□ 0.48
NEDD4-202ENST00000435532 ARID3AQ99856 593 aa18.08■□□□□ 0.48
NEDD4-202ENST00000435532 BACH2Q9BYV9 841 aa18.08■□□□□ 0.48
NEDD4-202ENST00000435532 PZPP20742 1482 aa18.08■□□□□ 0.48
NEDD4-202ENST00000435532 CHD1O14646 1710 aa18.08■□□□□ 0.48
NEDD4-202ENST00000435532 CALM1P0DP23 149 aa18.08■□□□□ 0.48
NEDD4-202ENST00000435532 CALM2P0DP24 149 aa18.08■□□□□ 0.48
NEDD4-202ENST00000435532 CALM3P0DP25 149 aa18.08■□□□□ 0.48
NEDD4-202ENST00000435532 MEIS3Q99687 375 aa18.08■□□□□ 0.48
NEDD4-202ENST00000435532 UPF3BQ9BZI7 483 aaKnown RBP18.08■□□□□ 0.48
NEDD4-202ENST00000435532 DDX17Q92841 729 aaKnown RBP18.07■□□□□ 0.48
NEDD4-202ENST00000435532 PAG1Q9NWQ8 432 aa18.07■□□□□ 0.48
NEDD4-202ENST00000435532 PICK1Q9NRD5 415 aa18.07■□□□□ 0.48
NEDD4-202ENST00000435532 RSPH6AQ9H0K4 717 aa18.07■□□□□ 0.48
NEDD4-202ENST00000435532 RBM27Q9P2N5 1060 aaKnown RBP18.07■□□□□ 0.48
NEDD4-202ENST00000435532 TTC22Q5TAA0 569 aa18.07■□□□□ 0.48
NEDD4-202ENST00000435532 CETN1Q12798 172 aa18.06■□□□□ 0.48
NEDD4-202ENST00000435532 NBPF7P0C2Y1 421 aaPredicted RBP18.06■□□□□ 0.48
NEDD4-202ENST00000435532 RTL9Q8NET4 1388 aa18.06■□□□□ 0.48
NEDD4-202ENST00000435532 PLS1Q14651 629 aa18.06■□□□□ 0.48
NEDD4-202ENST00000435532 NIM1KQ8IY84 436 aa18.06■□□□□ 0.48
NEDD4-202ENST00000435532 TSPOAP1O95153 1857 aa18.06■□□□□ 0.48
NEDD4-202ENST00000435532 MICU3Q86XE3 530 aa18.06■□□□□ 0.48
NEDD4-202ENST00000435532 ANKRD44Q8N8A2 993 aa18.06■□□□□ 0.48
NEDD4-202ENST00000435532 SMARCC2Q8TAQ2 1214 aa18.06■□□□□ 0.48
NEDD4-202ENST00000435532 TESK2Q96S53 571 aa18.06■□□□□ 0.48
NEDD4-202ENST00000435532 PARD3Q8TEW0 1356 aa18.06■□□□□ 0.48
NEDD4-202ENST00000435532 CCT2P78371 535 aaKnown RBP18.05■□□□□ 0.48
NEDD4-202ENST00000435532 TMOD4Q9NZQ9 345 aa18.05■□□□□ 0.48
NEDD4-202ENST00000435532 TTC41PQ6P2S7 1318 aa18.05■□□□□ 0.48
NEDD4-202ENST00000435532 METTL22Q9BUU2 404 aaPredicted RBP18.05■□□□□ 0.48
NEDD4-202ENST00000435532 SLC26A6Q9BXS9 759 aa18.05■□□□□ 0.48
NEDD4-202ENST00000435532 NFKBIBQ15653 356 aa18.05■□□□□ 0.48
NEDD4-202ENST00000435532 GPR162Q16538 588 aa18.05■□□□□ 0.48
NEDD4-202ENST00000435532 HIBADHP31937 336 aaKnown RBP18.05■□□□□ 0.48
NEDD4-202ENST00000435532 HSP90AA2PQ14568 343 aaPredicted RBP18.05■□□□□ 0.48
NEDD4-202ENST00000435532 MLH3Q9UHC1 1453 aa18.05■□□□□ 0.48
NEDD4-202ENST00000435532 RNF113AO15541 343 aaKnown RBP18.04■□□□□ 0.48
NEDD4-202ENST00000435532 LIG1P18858 919 aa18.04■□□□□ 0.48
NEDD4-202ENST00000435532 BMP2KLQ5H9B9 411 aa18.04■□□□□ 0.48
NEDD4-202ENST00000435532 CCDC181Q5TID7 509 aa18.04■□□□□ 0.48
NEDD4-202ENST00000435532 CKAP2LQ8IYA6 745 aa18.04■□□□□ 0.48
NEDD4-202ENST00000435532 MCM9Q9NXL9 1143 aa18.04■□□□□ 0.48
NEDD4-202ENST00000435532 BMP15O95972 392 aa18.04■□□□□ 0.48
NEDD4-202ENST00000435532 FAM196AQ6ZSG2 479 aa18.04■□□□□ 0.48
NEDD4-202ENST00000435532 ZBTB43O43298 467 aa18.04■□□□□ 0.48
NEDD4-202ENST00000435532 PDZRN4Q6ZMN7 1036 aaPredicted RBP18.04■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 78.7 ms