RNA–Protein interactions for RNA: ENST00000435213.6

GARNL3-205, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 2 BASIC

Gene GARNL3, Length 3,599 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-205ENST00000435213 RMI1Q9H9A7 625 aa8.54□□□□□ -1.04
GARNL3-205ENST00000435213 MYO5BQ9ULV0 1848 aa8.54□□□□□ -1.04
GARNL3-205ENST00000435213 ERC2O15083 957 aa8.54□□□□□ -1.04
GARNL3-205ENST00000435213 BRD1O95696 1058 aa8.54□□□□□ -1.04
GARNL3-205ENST00000435213 ELF1P32519 619 aa8.54□□□□□ -1.04
GARNL3-205ENST00000435213 ERC1Q8IUD2 1116 aa8.54□□□□□ -1.04
GARNL3-205ENST00000435213 RPAP2Q8IXW5 612 aaPredicted RBP8.54□□□□□ -1.04
GARNL3-205ENST00000435213 ATL2Q8NHH9 583 aa8.54□□□□□ -1.04
GARNL3-205ENST00000435213 CRACR2AQ9BSW2 395 aa8.54□□□□□ -1.04
GARNL3-205ENST00000435213 CDK12Q9NYV4 1490 aaPredicted RBP8.54□□□□□ -1.04
GARNL3-205ENST00000435213 SDSP20132 328 aa8.53□□□□□ -1.04
GARNL3-205ENST00000435213 TWISTNBQ3B726 338 aaPredicted RBP8.53□□□□□ -1.04
GARNL3-205ENST00000435213 AMOTQ4VCS5 1084 aa8.53□□□□□ -1.04
GARNL3-205ENST00000435213 MFSD4BQ5TF39 518 aa8.53□□□□□ -1.04
GARNL3-205ENST00000435213 NFXL1Q6ZNB6 911 aa8.53□□□□□ -1.04
GARNL3-205ENST00000435213 GTF3C6Q969F1 213 aa8.53□□□□□ -1.04
GARNL3-205ENST00000435213 EXOC4Q96A65 974 aa8.53□□□□□ -1.04
GARNL3-205ENST00000435213 ZNF396Q96N95 335 aaPredicted RBP8.53□□□□□ -1.04
GARNL3-205ENST00000435213 ZNF232Q9UNY5 417 aa8.53□□□□□ -1.04
GARNL3-205ENST00000435213 GCFC2P16383 781 aaKnown RBP8.53□□□□□ -1.04
GARNL3-205ENST00000435213 MCM6Q14566 821 aa8.53□□□□□ -1.04
GARNL3-205ENST00000435213 HDGFL2Q7Z4V5 671 aaPredicted RBP8.53□□□□□ -1.04
GARNL3-205ENST00000435213 ERO1AQ96HE7 468 aa8.53□□□□□ -1.04
GARNL3-205ENST00000435213 LARP6Q9BRS8 491 aaKnown RBP8.53□□□□□ -1.04
GARNL3-205ENST00000435213 A1CFQ9NQ94 594 aaKnown RBP8.53□□□□□ -1.04
GARNL3-205ENST00000435213 ATP7BP35670 1465 aa8.53□□□□□ -1.04
GARNL3-205ENST00000435213 A0A087WUV0 522 aaPredicted RBP8.53□□□□□ -1.04
GARNL3-205ENST00000435213 POLR3GO15318 223 aaPredicted RBP8.53□□□□□ -1.04
GARNL3-205ENST00000435213 CDKL5O76039 1030 aa8.53□□□□□ -1.04
GARNL3-205ENST00000435213 RPS6KA3P51812 740 aa8.53□□□□□ -1.04
GARNL3-205ENST00000435213 CUL4AQ13619 759 aa8.53□□□□□ -1.04
GARNL3-205ENST00000435213 CRYMQ14894 314 aa8.53□□□□□ -1.04
GARNL3-205ENST00000435213 FBXO38Q6PIJ6 1188 aa8.53□□□□□ -1.04
GARNL3-205ENST00000435213 INTS4Q96HW7 963 aaKnown RBP8.53□□□□□ -1.04
GARNL3-205ENST00000435213 MBIPQ9NS73 344 aa8.53□□□□□ -1.04
GARNL3-205ENST00000435213 ARGLU1Q9NWB6 273 aaPredicted RBP8.53□□□□□ -1.04
GARNL3-205ENST00000435213 RIMS2Q9UQ26 1411 aa8.53□□□□□ -1.04
GARNL3-205ENST00000435213 PREX1Q8TCU6 1659 aa8.52□□□□□ -1.04
GARNL3-205ENST00000435213 ECEL1O95672 775 aa8.52□□□□□ -1.04
GARNL3-205ENST00000435213 CADPS2Q86UW7 1296 aa8.52□□□□□ -1.04
GARNL3-205ENST00000435213 TSPYL6Q8N831 410 aa8.52□□□□□ -1.04
GARNL3-205ENST00000435213 SMARCE1Q969G3 411 aa8.52□□□□□ -1.04
GARNL3-205ENST00000435213 THOC1Q96FV9 657 aaKnown RBP8.52□□□□□ -1.04
GARNL3-205ENST00000435213 MKRN1Q9UHC7 482 aaKnown RBP8.52□□□□□ -1.04
GARNL3-205ENST00000435213 NSFL1CQ9UNZ2 370 aaKnown RBP8.52□□□□□ -1.04
GARNL3-205ENST00000435213 PTPRCP08575 1304 aa8.52□□□□□ -1.05
GARNL3-205ENST00000435213 ATP8B1O43520 1251 aa8.52□□□□□ -1.05
GARNL3-205ENST00000435213 SNUPNO95149 360 aaKnown RBP8.52□□□□□ -1.05
GARNL3-205ENST00000435213 PAX3P23760 479 aa8.52□□□□□ -1.05
GARNL3-205ENST00000435213 NF2P35240 595 aa8.52□□□□□ -1.05
GARNL3-205ENST00000435213 PRPHP41219 470 aa8.52□□□□□ -1.05
GARNL3-205ENST00000435213 CDC37Q16543 378 aaPredicted RBP8.52□□□□□ -1.05
GARNL3-205ENST00000435213 ANKRD18AQ8IVF6 992 aa8.52□□□□□ -1.05
GARNL3-205ENST00000435213 PHF8Q9UPP1 1060 aa8.52□□□□□ -1.05
GARNL3-205ENST00000435213 RGS12O14924 1447 aa8.52□□□□□ -1.05
GARNL3-205ENST00000435213 SSH2Q76I76 1423 aa8.52□□□□□ -1.05
GARNL3-205ENST00000435213 SETD1AO15047 1707 aaKnown RBP8.52□□□□□ -1.05
GARNL3-205ENST00000435213 GRIK3Q13003 919 aa8.52□□□□□ -1.05
GARNL3-205ENST00000435213 CCDC34Q96HJ3 373 aa8.52□□□□□ -1.05
GARNL3-205ENST00000435213 ZSCAN16Q9H4T2 348 aaPredicted RBP8.52□□□□□ -1.05
GARNL3-205ENST00000435213 TBC1D2BQ9UPU7 963 aa8.52□□□□□ -1.05
GARNL3-205ENST00000435213 TBC1D8BQ0IIM8 1120 aa8.51□□□□□ -1.05
GARNL3-205ENST00000435213 DRAXINQ8NBI3 349 aaPredicted RBP8.51□□□□□ -1.05
GARNL3-205ENST00000435213 TMX3Q96JJ7 454 aa8.51□□□□□ -1.05
GARNL3-205ENST00000435213 IQCGQ9H095 443 aaKnown RBP8.51□□□□□ -1.05
GARNL3-205ENST00000435213 OSBPL3Q9H4L5 887 aa8.51□□□□□ -1.05
GARNL3-205ENST00000435213 NRKQ7Z2Y5 1582 aa8.51□□□□□ -1.05
GARNL3-205ENST00000435213 YTHDC2Q9H6S0 1430 aaKnown RBP8.51□□□□□ -1.05
GARNL3-205ENST00000435213 SKILP12757 684 aa8.51□□□□□ -1.05
GARNL3-205ENST00000435213 TADA2BQ86TJ2 420 aa8.51□□□□□ -1.05
GARNL3-205ENST00000435213 PRPF38AQ8NAV1 312 aaKnown RBP8.51□□□□□ -1.05
GARNL3-205ENST00000435213 RTF1Q92541 710 aaKnown RBP8.51□□□□□ -1.05
GARNL3-205ENST00000435213 IL17RAQ96F46 866 aa8.51□□□□□ -1.05
GARNL3-205ENST00000435213 TCHHQ07283 1943 aa8.51□□□□□ -1.05
GARNL3-205ENST00000435213 ADCY5O95622 1261 aa8.51□□□□□ -1.05
GARNL3-205ENST00000435213 NUTM2GQ5VZR2 741 aa8.51□□□□□ -1.05
GARNL3-205ENST00000435213 CEP85Q6P2H3 762 aa8.51□□□□□ -1.05
GARNL3-205ENST00000435213 ZCRB1Q8TBF4 217 aaKnown RBP8.51□□□□□ -1.05
GARNL3-205ENST00000435213 ZNF483Q8TF39 744 aaPredicted RBP8.51□□□□□ -1.05
GARNL3-205ENST00000435213 PCDHGA4Q9Y5G9 962 aa8.51□□□□□ -1.05
GARNL3-205ENST00000435213 N4BP2Q86UW6 1770 aaPredicted RBP8.51□□□□□ -1.05
GARNL3-205ENST00000435213 RTL1A6NKG5 1358 aa8.5□□□□□ -1.05
GARNL3-205ENST00000435213 A0A1B0GUA9 196 aa8.5□□□□□ -1.05
GARNL3-205ENST00000435213 SLC5A9Q2M3M2 681 aa8.5□□□□□ -1.05
GARNL3-205ENST00000435213 C16orf71Q8IYS4 520 aaPredicted RBP8.5□□□□□ -1.05
GARNL3-205ENST00000435213 TMEM87AQ8NBN3 555 aa8.5□□□□□ -1.05
GARNL3-205ENST00000435213 CTCFLQ8NI51 663 aaPredicted RBP8.5□□□□□ -1.05
GARNL3-205ENST00000435213 DDX11Q96FC9 970 aa8.5□□□□□ -1.05
GARNL3-205ENST00000435213 STAG3Q9UJ98 1225 aa8.5□□□□□ -1.05
GARNL3-205ENST00000435213 TMEM131LA2VDJ0 1609 aa8.5□□□□□ -1.05
GARNL3-205ENST00000435213 PNMA6AP0CW24 399 aaPredicted RBP8.5□□□□□ -1.05
GARNL3-205ENST00000435213 IMPDH2P12268 514 aa8.5□□□□□ -1.05
GARNL3-205ENST00000435213 ZNF280DQ6N043 979 aa8.5□□□□□ -1.05
GARNL3-205ENST00000435213 NECTIN2Q92692 538 aa8.5□□□□□ -1.05
GARNL3-205ENST00000435213 FAM163BP0C2L3 166 aa8.5□□□□□ -1.05
GARNL3-205ENST00000435213 LMAN1P49257 510 aa8.5□□□□□ -1.05
GARNL3-205ENST00000435213 EIF5P55010 431 aaKnown RBP8.5□□□□□ -1.05
GARNL3-205ENST00000435213 NAA30Q147X3 362 aaPredicted RBP8.5□□□□□ -1.05
GARNL3-205ENST00000435213 ITSN1Q15811 1721 aa8.49□□□□□ -1.05
GARNL3-205ENST00000435213 MSH6P52701 1360 aa8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 127.6 ms