RNA–Protein interactions for RNA: ENST00000435201.5

LIMK1-203, Transcript of LIM domain kinase 1, humanhuman

TSL 1 (best)

Gene LIMK1, Length 1,883 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-203ENST00000435201 ASAP1Q9ULH1 1129 aa20.06■□□□□ 0.8
LIMK1-203ENST00000435201 EYA2O00167 538 aa20.05■□□□□ 0.8
LIMK1-203ENST00000435201 SLC27A2O14975 620 aa20.05■□□□□ 0.8
LIMK1-203ENST00000435201 PRPF40AO75400 957 aaKnown RBP20.05■□□□□ 0.8
LIMK1-203ENST00000435201 ADCK5Q3MIX3 580 aa20.05■□□□□ 0.8
LIMK1-203ENST00000435201 DNAJC10Q8IXB1 793 aa20.05■□□□□ 0.8
LIMK1-203ENST00000435201 BCL9O00512 1426 aa20.05■□□□□ 0.8
LIMK1-203ENST00000435201 ZNF609O15014 1411 aa20.04■□□□□ 0.8
LIMK1-203ENST00000435201 FBXO3Q9UK99 471 aa20.04■□□□□ 0.8
LIMK1-203ENST00000435201 SPEF2Q9C093 1822 aa20.04■□□□□ 0.8
LIMK1-203ENST00000435201 DNAJC2Q99543 621 aaKnown RBP20.03■□□□□ 0.8
LIMK1-203ENST00000435201 TNKS1BP1Q9C0C2 1729 aaKnown RBP20.03■□□□□ 0.8
LIMK1-203ENST00000435201 PALLDQ8WX93 1383 aa20.03■□□□□ 0.8
LIMK1-203ENST00000435201 TAF5LO75529 589 aa20.03■□□□□ 0.8
LIMK1-203ENST00000435201 MBD3O95983 291 aa20.03■□□□□ 0.8
LIMK1-203ENST00000435201 CPA1P15085 419 aa20.03■□□□□ 0.8
LIMK1-203ENST00000435201 TSGA10IPQ3SY00 556 aa20.03■□□□□ 0.8
LIMK1-203ENST00000435201 FOXD4L5Q5VV16 416 aaPredicted RBP20.03■□□□□ 0.8
LIMK1-203ENST00000435201 ZNF589Q86UQ0 364 aaPredicted RBP20.03■□□□□ 0.8
LIMK1-203ENST00000435201 FOXD4L4Q8WXT5 416 aaPredicted RBP20.03■□□□□ 0.8
LIMK1-203ENST00000435201 EDC3Q96F86 508 aaKnown RBP20.03■□□□□ 0.8
LIMK1-203ENST00000435201 PLA2G12BQ9BX93 195 aa20.03■□□□□ 0.8
LIMK1-203ENST00000435201 SMC3Q9UQE7 1217 aa20.03■□□□□ 0.8
LIMK1-203ENST00000435201 PCCAP05165 728 aaPredicted RBP20.02■□□□□ 0.8
LIMK1-203ENST00000435201 ZNF445P59923 1031 aa20.02■□□□□ 0.8
LIMK1-203ENST00000435201 GAS2L3Q86XJ1 694 aa20.02■□□□□ 0.8
LIMK1-203ENST00000435201 ZNF330Q9Y3S2 320 aaPredicted RBP20.02■□□□□ 0.8
LIMK1-203ENST00000435201 ANKRD36CQ5JPF3 1778 aa20.02■□□□□ 0.79
LIMK1-203ENST00000435201 MAP3K15Q6ZN16 1313 aa20.02■□□□□ 0.79
LIMK1-203ENST00000435201 NCLP19338 710 aaKnown RBP20.01■□□□□ 0.79
LIMK1-203ENST00000435201 ANKRD1Q15327 319 aa20.01■□□□□ 0.79
LIMK1-203ENST00000435201 USPL1Q5W0Q7 1092 aa20.01■□□□□ 0.79
LIMK1-203ENST00000435201 KBTBD3Q8NAB2 608 aa20.01■□□□□ 0.79
LIMK1-203ENST00000435201 NEUROD6Q96NK8 337 aa20.01■□□□□ 0.79
LIMK1-203ENST00000435201 ALDH8A1Q9H2A2 487 aaPredicted RBP20.01■□□□□ 0.79
LIMK1-203ENST00000435201 EXOC5O00471 708 aa20.01■□□□□ 0.79
LIMK1-203ENST00000435201 KRT32Q14532 448 aa20.01■□□□□ 0.79
LIMK1-203ENST00000435201 CCDC57Q2TAC2 916 aa20.01■□□□□ 0.79
LIMK1-203ENST00000435201 HSP90AB3PQ58FF7 597 aa20.01■□□□□ 0.79
LIMK1-203ENST00000435201 CAVIN1Q6NZI2 390 aaKnown RBP20.01■□□□□ 0.79
LIMK1-203ENST00000435201 SH3TC1Q8TE82 1336 aa20■□□□□ 0.79
LIMK1-203ENST00000435201 MCMDC2Q4G0Z9 681 aa20■□□□□ 0.79
LIMK1-203ENST00000435201 BLOC1S2Q6QNY1 142 aa20■□□□□ 0.79
LIMK1-203ENST00000435201 GPT2Q8TD30 523 aa20■□□□□ 0.79
LIMK1-203ENST00000435201 PANK2Q9BZ23 570 aa20■□□□□ 0.79
LIMK1-203ENST00000435201 ZSCAN23Q3MJ62 389 aa19.99■□□□□ 0.79
LIMK1-203ENST00000435201 LRRC24Q50LG9 513 aa19.99■□□□□ 0.79
LIMK1-203ENST00000435201 GIGYF2Q6Y7W6 1299 aaKnown RBP19.99■□□□□ 0.79
LIMK1-203ENST00000435201 ZBTB38Q8NAP3 1195 aaPredicted RBP19.99■□□□□ 0.79
LIMK1-203ENST00000435201 PPIL4Q8WUA2 492 aaKnown RBP eCLIP19.99■□□□□ 0.79
LIMK1-203ENST00000435201 PAG1Q9NWQ8 432 aa19.99■□□□□ 0.79
LIMK1-203ENST00000435201 U3KPZ7 1027 aaPredicted RBP19.99■□□□□ 0.79
LIMK1-203ENST00000435201 CDHR2Q9BYE9 1310 aa19.99■□□□□ 0.79
LIMK1-203ENST00000435201 LARGE1O95461 756 aa19.99■□□□□ 0.79
LIMK1-203ENST00000435201 DDX46Q7L014 1031 aaKnown RBP19.99■□□□□ 0.79
LIMK1-203ENST00000435201 ZNF594Q96JF6 807 aaPredicted RBP19.99■□□□□ 0.79
LIMK1-203ENST00000435201 CDCA7Q9BWT1 371 aaPredicted RBP19.99■□□□□ 0.79
LIMK1-203ENST00000435201 STX6O43752 255 aa19.98■□□□□ 0.79
LIMK1-203ENST00000435201 ZSCAN22P10073 491 aaPredicted RBP19.98■□□□□ 0.79
LIMK1-203ENST00000435201 RPS6KB1P23443 525 aa19.98■□□□□ 0.79
LIMK1-203ENST00000435201 CCDC83Q8IWF9 413 aa19.98■□□□□ 0.79
LIMK1-203ENST00000435201 LARP6Q9BRS8 491 aaKnown RBP19.98■□□□□ 0.79
LIMK1-203ENST00000435201 CEP126Q9P2H0 1117 aa19.98■□□□□ 0.79
LIMK1-203ENST00000435201 DOT1LQ8TEK3 1739 aa19.97■□□□□ 0.79
LIMK1-203ENST00000435201 A0A1B0GUL7 405 aa19.97■□□□□ 0.79
LIMK1-203ENST00000435201 CYP19A1P11511 503 aaPredicted RBP19.97■□□□□ 0.79
LIMK1-203ENST00000435201 PDIA4P13667 645 aaKnown RBP19.97■□□□□ 0.79
LIMK1-203ENST00000435201 TIMM10P62072 90 aa19.97■□□□□ 0.79
LIMK1-203ENST00000435201 FAM43AQ8N2R8 423 aa19.97■□□□□ 0.79
LIMK1-203ENST00000435201 HELLSQ9NRZ9 838 aa19.97■□□□□ 0.79
LIMK1-203ENST00000435201 AKAP2Q9Y2D5 859 aa19.97■□□□□ 0.79
LIMK1-203ENST00000435201 NDUFB9Q9Y6M9 179 aa19.97■□□□□ 0.79
LIMK1-203ENST00000435201 CSF1RP07333 972 aa19.96■□□□□ 0.79
LIMK1-203ENST00000435201 SYT1P21579 422 aa19.96■□□□□ 0.79
LIMK1-203ENST00000435201 ME3Q16798 604 aa19.96■□□□□ 0.79
LIMK1-203ENST00000435201 CHAMP1Q96JM3 812 aa19.96■□□□□ 0.79
LIMK1-203ENST00000435201 ATP6V1DQ9Y5K8 247 aa19.96■□□□□ 0.79
LIMK1-203ENST00000435201 NRAPQ86VF7 1730 aa19.96■□□□□ 0.79
LIMK1-203ENST00000435201 GOLIM4O00461 696 aa19.95■□□□□ 0.78
LIMK1-203ENST00000435201 IFIT1P09914 478 aaKnown RBP19.95■□□□□ 0.78
LIMK1-203ENST00000435201 GJB2P29033 226 aa19.95■□□□□ 0.78
LIMK1-203ENST00000435201 TMEM87AQ8NBN3 555 aa19.95■□□□□ 0.78
LIMK1-203ENST00000435201 FAM89AQ96GI7 184 aa19.95■□□□□ 0.78
LIMK1-203ENST00000435201 PUS3Q9BZE2 481 aaKnown RBP19.95■□□□□ 0.78
LIMK1-203ENST00000435201 TPCN1Q9ULQ1 816 aa19.95■□□□□ 0.78
LIMK1-203ENST00000435201 MYH3P11055 1940 aa19.95■□□□□ 0.78
LIMK1-203ENST00000435201 IFIT5Q13325 482 aaKnown RBP19.94■□□□□ 0.78
LIMK1-203ENST00000435201 TAF7LQ5H9L4 462 aa19.94■□□□□ 0.78
LIMK1-203ENST00000435201 SLC4A9Q96Q91 983 aa19.94■□□□□ 0.78
LIMK1-203ENST00000435201 CCDC9Q9Y3X0 531 aaKnown RBP19.94■□□□□ 0.78
LIMK1-203ENST00000435201 F13A1P00488 732 aa19.94■□□□□ 0.78
LIMK1-203ENST00000435201 NLRP10Q86W26 655 aa19.94■□□□□ 0.78
LIMK1-203ENST00000435201 RTN4Q9NQC3 1192 aaKnown RBP19.94■□□□□ 0.78
LIMK1-203ENST00000435201 THRAP3Q9Y2W1 955 aaKnown RBP19.94■□□□□ 0.78
LIMK1-203ENST00000435201 NUP98P52948 1817 aa19.93■□□□□ 0.78
LIMK1-203ENST00000435201 LRRFIP1Q32MZ4 808 aaKnown RBP19.93■□□□□ 0.78
LIMK1-203ENST00000435201 CCDC158Q5M9N0 1113 aa19.93■□□□□ 0.78
LIMK1-203ENST00000435201 ZMYM1Q5SVZ6 1142 aa19.93■□□□□ 0.78
LIMK1-203ENST00000435201 CCDC129Q6ZRS4 1044 aa19.93■□□□□ 0.78
LIMK1-203ENST00000435201 SYAP1Q96A49 352 aaPredicted RBP19.93■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms