RNA–Protein interactions for RNA: ENST00000435067.2

LINC01055-201, Transcript of long intergenic non-protein coding RNA 1055, humanhuman

TSL 3 BASIC

Gene LINC01055, Length 1,721 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01055-201ENST00000435067 ANKRD45Q5TZF3 282 aa12.9□□□□□ -0.34
LINC01055-201ENST00000435067 CNBD1Q8NA66 436 aa12.9□□□□□ -0.34
LINC01055-201ENST00000435067 MYH3P11055 1940 aa12.89□□□□□ -0.35
LINC01055-201ENST00000435067 MMP10P09238 476 aa12.89□□□□□ -0.35
LINC01055-201ENST00000435067 HSP90B1P14625 803 aaKnown RBP12.89□□□□□ -0.35
LINC01055-201ENST00000435067 RFX5P48382 616 aaPredicted RBP12.89□□□□□ -0.35
LINC01055-201ENST00000435067 PRR5LQ6MZQ0 368 aa12.89□□□□□ -0.35
LINC01055-201ENST00000435067 SIL1Q9H173 461 aa12.89□□□□□ -0.35
LINC01055-201ENST00000435067 GREM2Q9H772 168 aa12.89□□□□□ -0.35
LINC01055-201ENST00000435067 PDZRN3Q9UPQ7 1066 aa12.89□□□□□ -0.35
LINC01055-201ENST00000435067 PTPN12Q05209 780 aaKnown RBP12.88□□□□□ -0.35
LINC01055-201ENST00000435067 CCDC57Q2TAC2 916 aa12.88□□□□□ -0.35
LINC01055-201ENST00000435067 SLC10A5Q5PT55 438 aa12.88□□□□□ -0.35
LINC01055-201ENST00000435067 C3orf67Q6ZVT6 689 aa12.88□□□□□ -0.35
LINC01055-201ENST00000435067 ZNF594Q96JF6 807 aaPredicted RBP12.88□□□□□ -0.35
LINC01055-201ENST00000435067 ITGA6P23229 1130 aa12.88□□□□□ -0.35
LINC01055-201ENST00000435067 NUCB1Q02818 461 aa12.88□□□□□ -0.35
LINC01055-201ENST00000435067 IFIT5Q13325 482 aaKnown RBP12.88□□□□□ -0.35
LINC01055-201ENST00000435067 OS9Q13438 667 aaPredicted RBP12.88□□□□□ -0.35
LINC01055-201ENST00000435067 R3HDM1Q15032 1099 aaKnown RBP12.88□□□□□ -0.35
LINC01055-201ENST00000435067 LAMB2P55268 1798 aa12.87□□□□□ -0.35
LINC01055-201ENST00000435067 SMARCA5O60264 1052 aaPredicted RBP12.87□□□□□ -0.35
LINC01055-201ENST00000435067 CCDC152Q4G0S7 254 aa12.87□□□□□ -0.35
LINC01055-201ENST00000435067 CHD1LQ86WJ1 897 aa12.87□□□□□ -0.35
LINC01055-201ENST00000435067 NLRP3Q96P20 1036 aa12.87□□□□□ -0.35
LINC01055-201ENST00000435067 LNPKQ9C0E8 428 aa12.87□□□□□ -0.35
LINC01055-201ENST00000435067 NOP58Q9Y2X3 529 aaKnown RBP12.87□□□□□ -0.35
LINC01055-201ENST00000435067 PARP3Q9Y6F1 533 aa12.87□□□□□ -0.35
LINC01055-201ENST00000435067 ST5P78524 1137 aa12.86□□□□□ -0.35
LINC01055-201ENST00000435067 G3BP1Q13283 466 aaKnown RBP eCLIP12.86□□□□□ -0.35
LINC01055-201ENST00000435067 TAF7LQ5H9L4 462 aa12.86□□□□□ -0.35
LINC01055-201ENST00000435067 COPRSQ9NQ92 184 aa12.86□□□□□ -0.35
LINC01055-201ENST00000435067 SEC31BQ9NQW1 1179 aa12.86□□□□□ -0.35
LINC01055-201ENST00000435067 CASZ1Q86V15 1759 aa12.85□□□□□ -0.35
LINC01055-201ENST00000435067 ANKRD18BA2A2Z9 1011 aa12.85□□□□□ -0.35
LINC01055-201ENST00000435067 RGS3P49796 1198 aa12.85□□□□□ -0.35
LINC01055-201ENST00000435067 HSP90AB4PQ58FF6 505 aa12.85□□□□□ -0.35
LINC01055-201ENST00000435067 LRRCC1Q9C099 1032 aa12.85□□□□□ -0.35
LINC01055-201ENST00000435067 ZBTB47Q9UFB7 747 aaPredicted RBP12.85□□□□□ -0.35
LINC01055-201ENST00000435067 PSDA5PKW4 1024 aaPredicted RBP12.85□□□□□ -0.35
LINC01055-201ENST00000435067 RAB11FIP3O75154 756 aa12.85□□□□□ -0.35
LINC01055-201ENST00000435067 SF3B3Q15393 1217 aaKnown RBP12.85□□□□□ -0.35
LINC01055-201ENST00000435067 RHPN1Q8TCX5 695 aa12.85□□□□□ -0.35
LINC01055-201ENST00000435067 SLC16A10Q8TF71 515 aa12.85□□□□□ -0.35
LINC01055-201ENST00000435067 PUS3Q9BZE2 481 aaKnown RBP12.85□□□□□ -0.35
LINC01055-201ENST00000435067 IL1RAPL2Q9NP60 686 aa12.85□□□□□ -0.35
LINC01055-201ENST00000435067 TNRC6CQ9HCJ0 1690 aaKnown RBP12.84□□□□□ -0.35
LINC01055-201ENST00000435067 SASH1O94885 1247 aa12.84□□□□□ -0.35
LINC01055-201ENST00000435067 ZBTB7AO95365 584 aa12.84□□□□□ -0.35
LINC01055-201ENST00000435067 LRRC24Q50LG9 513 aa12.84□□□□□ -0.35
LINC01055-201ENST00000435067 C16orf71Q8IYS4 520 aaPredicted RBP12.84□□□□□ -0.35
LINC01055-201ENST00000435067 EYA2O00167 538 aa12.83□□□□□ -0.36
LINC01055-201ENST00000435067 PDE4AP27815 886 aa12.83□□□□□ -0.36
LINC01055-201ENST00000435067 LDHAL6AQ6ZMR3 332 aa12.83□□□□□ -0.36
LINC01055-201ENST00000435067 ATG9AQ7Z3C6 839 aa12.83□□□□□ -0.36
LINC01055-201ENST00000435067 KIF1BPQ96EK5 621 aa12.83□□□□□ -0.36
LINC01055-201ENST00000435067 NRXN2Q9P2S2 1712 aa12.83□□□□□ -0.36
LINC01055-201ENST00000435067 ERC1Q8IUD2 1116 aa12.82□□□□□ -0.36
LINC01055-201ENST00000435067 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.82□□□□□ -0.36
LINC01055-201ENST00000435067 RTL9Q8NET4 1388 aa12.82□□□□□ -0.36
LINC01055-201ENST00000435067 TAF1P21675 1872 aa12.82□□□□□ -0.36
LINC01055-201ENST00000435067 TFCP2Q12800 502 aa12.82□□□□□ -0.36
LINC01055-201ENST00000435067 CNNM1Q9NRU3 951 aa12.82□□□□□ -0.36
LINC01055-201ENST00000435067 ATF5Q9Y2D1 282 aaPredicted RBP12.82□□□□□ -0.36
LINC01055-201ENST00000435067 COL4A1P02462 1669 aa12.81□□□□□ -0.36
LINC01055-201ENST00000435067 RIC1Q4ADV7 1423 aa12.81□□□□□ -0.36
LINC01055-201ENST00000435067 CIAO1O76071 339 aa12.81□□□□□ -0.36
LINC01055-201ENST00000435067 IGHMBP2P38935 993 aaKnown RBP12.81□□□□□ -0.36
LINC01055-201ENST00000435067 IL15P40933 162 aaPredicted RBP12.81□□□□□ -0.36
LINC01055-201ENST00000435067 DDX46Q7L014 1031 aaKnown RBP12.81□□□□□ -0.36
LINC01055-201ENST00000435067 OTUD7AQ8TE49 926 aaPredicted RBP12.81□□□□□ -0.36
LINC01055-201ENST00000435067 CDC5LQ99459 802 aaKnown RBP12.81□□□□□ -0.36
LINC01055-201ENST00000435067 MPHOSPH8Q99549 860 aa12.81□□□□□ -0.36
LINC01055-201ENST00000435067 BRIP1Q9BX63 1249 aa12.81□□□□□ -0.36
LINC01055-201ENST00000435067 CRY2Q49AN0 593 aa12.8□□□□□ -0.36
LINC01055-201ENST00000435067 ANKRD18AQ8IVF6 992 aa12.8□□□□□ -0.36
LINC01055-201ENST00000435067 RPGRQ92834 1020 aaKnown RBP12.8□□□□□ -0.36
LINC01055-201ENST00000435067 CELF1Q92879 486 aaKnown RBP12.8□□□□□ -0.36
LINC01055-201ENST00000435067 MTFR1LQ9H019 292 aa12.8□□□□□ -0.36
LINC01055-201ENST00000435067 FBXO3Q9UK99 471 aa12.8□□□□□ -0.36
LINC01055-201ENST00000435067 RIPOR2Q9Y4F9 1068 aa12.8□□□□□ -0.36
LINC01055-201ENST00000435067 ANKRD31Q8N7Z5 1873 aa12.8□□□□□ -0.36
LINC01055-201ENST00000435067 SPEF2Q9C093 1822 aa12.8□□□□□ -0.36
LINC01055-201ENST00000435067 CLASRPQ8N2M8 674 aaKnown RBP12.79□□□□□ -0.36
LINC01055-201ENST00000435067 KLRG2A4D1S0 409 aaPredicted RBP12.79□□□□□ -0.36
LINC01055-201ENST00000435067 PDE6BP35913 854 aa12.79□□□□□ -0.36
LINC01055-201ENST00000435067 RPS8P62241 208 aaKnown RBP12.79□□□□□ -0.36
LINC01055-201ENST00000435067 METTL24Q5JXM2 366 aa12.79□□□□□ -0.36
LINC01055-201ENST00000435067 CEP126Q9P2H0 1117 aa12.79□□□□□ -0.36
LINC01055-201ENST00000435067 AACSQ86V21 672 aa12.78□□□□□ -0.36
LINC01055-201ENST00000435067 PLEKHM2Q8IWE5 1019 aa12.78□□□□□ -0.36
LINC01055-201ENST00000435067 HELBQ8NG08 1087 aaPredicted RBP12.78□□□□□ -0.36
LINC01055-201ENST00000435067 EAF2Q96CJ1 260 aaPredicted RBP12.78□□□□□ -0.36
LINC01055-201ENST00000435067 RBM17Q96I25 401 aaKnown RBP12.78□□□□□ -0.36
LINC01055-201ENST00000435067 IFIT2P09913 472 aaKnown RBP12.77□□□□□ -0.36
LINC01055-201ENST00000435067 SRGNP10124 158 aa12.77□□□□□ -0.36
LINC01055-201ENST00000435067 GRAPQ13588 217 aa12.77□□□□□ -0.36
LINC01055-201ENST00000435067 TNNI3KQ59H18 835 aa12.77□□□□□ -0.36
LINC01055-201ENST00000435067 GRAPLQ8TC17 118 aaPredicted RBP12.77□□□□□ -0.36
LINC01055-201ENST00000435067 CCDC8Q9H0W5 538 aaPredicted RBP12.77□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms