RNA–Protein interactions for RNA: ENST00000432645.6

HDAC9-212, Transcript of histone deacetylase 9, humanhuman

TSL 1 (best) BASIC

Gene HDAC9, Length 3,099 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-212ENST00000432645 LARP6Q9BRS8 491 aaKnown RBP10.04□□□□□ -0.8
HDAC9-212ENST00000432645 TBC1D2BQ9UPU7 963 aa10.04□□□□□ -0.8
HDAC9-212ENST00000432645 GTF3C5Q9Y5Q8 519 aaPredicted RBP10.04□□□□□ -0.8
HDAC9-212ENST00000432645 SPATA31A1Q5TZJ5 1347 aa10.04□□□□□ -0.8
HDAC9-212ENST00000432645 CHGBP05060 677 aa10.04□□□□□ -0.8
HDAC9-212ENST00000432645 CYP19A1P11511 503 aaPredicted RBP10.04□□□□□ -0.8
HDAC9-212ENST00000432645 TMX3Q96JJ7 454 aa10.04□□□□□ -0.8
HDAC9-212ENST00000432645 CIZ1Q9ULV3 898 aaPredicted RBP10.04□□□□□ -0.8
HDAC9-212ENST00000432645 LTBP4Q8N2S1 1624 aa10.04□□□□□ -0.8
HDAC9-212ENST00000432645 CPA1P15085 419 aa10.03□□□□□ -0.8
HDAC9-212ENST00000432645 ANAPC15P60006 121 aa10.03□□□□□ -0.8
HDAC9-212ENST00000432645 NMIQ13287 307 aaPredicted RBP10.03□□□□□ -0.8
HDAC9-212ENST00000432645 RGS22Q8NE09 1264 aa10.03□□□□□ -0.8
HDAC9-212ENST00000432645 RUFY2Q8WXA3 655 aa10.03□□□□□ -0.8
HDAC9-212ENST00000432645 ISCA1Q9BUE6 129 aa10.03□□□□□ -0.8
HDAC9-212ENST00000432645 PUS3Q9BZE2 481 aaKnown RBP10.03□□□□□ -0.8
HDAC9-212ENST00000432645 PRDM10Q9NQV6 1147 aa10.03□□□□□ -0.8
HDAC9-212ENST00000432645 TMEM51Q9NW97 253 aa10.03□□□□□ -0.8
HDAC9-212ENST00000432645 PAPPAQ13219 1627 aa10.03□□□□□ -0.8
HDAC9-212ENST00000432645 AHDC1Q5TGY3 1603 aaPredicted RBP10.03□□□□□ -0.8
HDAC9-212ENST00000432645 IGSF3O75054 1194 aa10.03□□□□□ -0.8
HDAC9-212ENST00000432645 ATG9AQ7Z3C6 839 aa10.03□□□□□ -0.8
HDAC9-212ENST00000432645 SNX14Q9Y5W7 946 aa10.03□□□□□ -0.8
HDAC9-212ENST00000432645 A0A0D9SFI3 127 aa10.03□□□□□ -0.8
HDAC9-212ENST00000432645 TOM1O60784 492 aa10.03□□□□□ -0.8
HDAC9-212ENST00000432645 PRPF40BQ6NWY9 871 aaKnown RBP10.03□□□□□ -0.8
HDAC9-212ENST00000432645 MARCH10Q8NA82 808 aaPredicted RBP10.03□□□□□ -0.8
HDAC9-212ENST00000432645 RRAGDQ9NQL2 400 aaPredicted RBP10.03□□□□□ -0.8
HDAC9-212ENST00000432645 KCNJ4P48050 445 aa10.02□□□□□ -0.81
HDAC9-212ENST00000432645 CCDC57Q2TAC2 916 aa10.02□□□□□ -0.81
HDAC9-212ENST00000432645 FOXD4L5Q5VV16 416 aaPredicted RBP10.02□□□□□ -0.81
HDAC9-212ENST00000432645 PLCD3Q8N3E9 789 aa10.02□□□□□ -0.81
HDAC9-212ENST00000432645 FOXD4L4Q8WXT5 416 aaPredicted RBP10.02□□□□□ -0.81
HDAC9-212ENST00000432645 COL15A1P39059 1388 aa10.02□□□□□ -0.81
HDAC9-212ENST00000432645 MAP3K15Q6ZN16 1313 aa10.02□□□□□ -0.81
HDAC9-212ENST00000432645 GIGYF2Q6Y7W6 1299 aaKnown RBP10.02□□□□□ -0.81
HDAC9-212ENST00000432645 DDX46Q7L014 1031 aaKnown RBP10.02□□□□□ -0.81
HDAC9-212ENST00000432645 AK9Q5TCS8 1911 aa10.02□□□□□ -0.81
HDAC9-212ENST00000432645 FAM177BA6PVY3 158 aa10.01□□□□□ -0.81
HDAC9-212ENST00000432645 UBAP1LF5GYI3 381 aa10.01□□□□□ -0.81
HDAC9-212ENST00000432645 TRAK2O60296 914 aa10.01□□□□□ -0.81
HDAC9-212ENST00000432645 C8orf37Q96NL8 207 aa10.01□□□□□ -0.81
HDAC9-212ENST00000432645 PANK2Q9BZ23 570 aa10.01□□□□□ -0.81
HDAC9-212ENST00000432645 ATP5JP18859 108 aa10.01□□□□□ -0.81
HDAC9-212ENST00000432645 ATP6V1AP38606 617 aa10.01□□□□□ -0.81
HDAC9-212ENST00000432645 FAM98CQ17RN3 349 aaKnown RBP10.01□□□□□ -0.81
HDAC9-212ENST00000432645 ADCK5Q3MIX3 580 aa10.01□□□□□ -0.81
HDAC9-212ENST00000432645 GRIPAP1Q4V328 841 aa10.01□□□□□ -0.81
HDAC9-212ENST00000432645 GBP4Q96PP9 640 aa10.01□□□□□ -0.81
HDAC9-212ENST00000432645 EYA2O00167 538 aa10.01□□□□□ -0.81
HDAC9-212ENST00000432645 KCNQ2O43526 872 aa10.01□□□□□ -0.81
HDAC9-212ENST00000432645 DTNBO60941 627 aa10.01□□□□□ -0.81
HDAC9-212ENST00000432645 CASTP20810 708 aaKnown RBP10.01□□□□□ -0.81
HDAC9-212ENST00000432645 ZNF589Q86UQ0 364 aaPredicted RBP10.01□□□□□ -0.81
HDAC9-212ENST00000432645 DZIP3Q86Y13 1208 aaKnown RBP10.01□□□□□ -0.81
HDAC9-212ENST00000432645 PHLPP1O60346 1717 aa10□□□□□ -0.81
HDAC9-212ENST00000432645 ITGB4P16144 1822 aa10□□□□□ -0.81
HDAC9-212ENST00000432645 IL15P40933 162 aaPredicted RBP10□□□□□ -0.81
HDAC9-212ENST00000432645 SLFNL1Q499Z3 407 aa10□□□□□ -0.81
HDAC9-212ENST00000432645 NLRP10Q86W26 655 aa10□□□□□ -0.81
HDAC9-212ENST00000432645 ZBTB38Q8NAP3 1195 aaPredicted RBP10□□□□□ -0.81
HDAC9-212ENST00000432645 COL22A1Q8NFW1 1626 aaPredicted RBP10□□□□□ -0.81
HDAC9-212ENST00000432645 NUP188Q5SRE5 1749 aa10□□□□□ -0.81
HDAC9-212ENST00000432645 SPATA31A5Q5VU36 1347 aa10□□□□□ -0.81
HDAC9-212ENST00000432645 SPATA31A7Q8IWB4 1347 aa10□□□□□ -0.81
HDAC9-212ENST00000432645 NGLY1Q96IV0 654 aa10□□□□□ -0.81
HDAC9-212ENST00000432645 CHAMP1Q96JM3 812 aa10□□□□□ -0.81
HDAC9-212ENST00000432645 SEC62Q99442 399 aaKnown RBP10□□□□□ -0.81
HDAC9-212ENST00000432645 TRMT112Q9UI30 125 aaKnown RBP10□□□□□ -0.81
HDAC9-212ENST00000432645 RBM8AQ9Y5S9 174 aaKnown RBP10□□□□□ -0.81
HDAC9-212ENST00000432645 CCDC171Q6TFL3 1326 aa9.99□□□□□ -0.81
HDAC9-212ENST00000432645 A0A1B0GUL7 405 aa9.99□□□□□ -0.81
HDAC9-212ENST00000432645 DDX11L8A8MPP1 907 aa9.99□□□□□ -0.81
HDAC9-212ENST00000432645 PCCAP05165 728 aaPredicted RBP9.99□□□□□ -0.81
HDAC9-212ENST00000432645 HMGB1P09429 215 aaKnown RBP9.99□□□□□ -0.81
HDAC9-212ENST00000432645 MCM2P49736 904 aa9.99□□□□□ -0.81
HDAC9-212ENST00000432645 KCNQ4P56696 695 aa9.99□□□□□ -0.81
HDAC9-212ENST00000432645 TRIM28Q13263 835 aaKnown RBP9.99□□□□□ -0.81
HDAC9-212ENST00000432645 CCDC129Q6ZRS4 1044 aa9.99□□□□□ -0.81
HDAC9-212ENST00000432645 JAKMIP1Q96N16 626 aaKnown RBP9.99□□□□□ -0.81
HDAC9-212ENST00000432645 CDCA7Q9BWT1 371 aaPredicted RBP9.99□□□□□ -0.81
HDAC9-212ENST00000432645 THRAP3Q9Y2W1 955 aaKnown RBP9.99□□□□□ -0.81
HDAC9-212ENST00000432645 HIP1O00291 1037 aa9.99□□□□□ -0.81
HDAC9-212ENST00000432645 GOLIM4O00461 696 aa9.99□□□□□ -0.81
HDAC9-212ENST00000432645 IFIT5Q13325 482 aaKnown RBP9.99□□□□□ -0.81
HDAC9-212ENST00000432645 COL9A3Q14050 684 aaPredicted RBP9.99□□□□□ -0.81
HDAC9-212ENST00000432645 PIAS4Q8N2W9 510 aaPredicted RBP9.99□□□□□ -0.81
HDAC9-212ENST00000432645 CWC22Q9HCG8 908 aaKnown RBP9.99□□□□□ -0.81
HDAC9-212ENST00000432645 CEP126Q9P2H0 1117 aa9.99□□□□□ -0.81
HDAC9-212ENST00000432645 EPB41L2O43491 1005 aaKnown RBP9.98□□□□□ -0.81
HDAC9-212ENST00000432645 AK2P54819 239 aa9.98□□□□□ -0.81
HDAC9-212ENST00000432645 NUCB2P80303 420 aa9.98□□□□□ -0.81
HDAC9-212ENST00000432645 TJP1Q07157 1748 aa9.98□□□□□ -0.81
HDAC9-212ENST00000432645 LOC102724428A0A0B4J2F2 783 aa9.98□□□□□ -0.81
HDAC9-212ENST00000432645 BAG4O95429 457 aaKnown RBP9.98□□□□□ -0.81
HDAC9-212ENST00000432645 CRKLP46109 303 aaKnown RBP9.98□□□□□ -0.81
HDAC9-212ENST00000432645 SIK1P57059 783 aa9.98□□□□□ -0.81
HDAC9-212ENST00000432645 NECTIN1Q15223 517 aa9.98□□□□□ -0.81
HDAC9-212ENST00000432645 HAUS7Q99871 368 aa9.98□□□□□ -0.81
HDAC9-212ENST00000432645 GREM2Q9H772 168 aa9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms