RNA–Protein interactions for RNA: ENST00000432519.5

RFTN1-203, Transcript of raftlin, lipid raft linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RFTN1, Length 2,695 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFTN1-203ENST00000432519 RPAP1Q9BWH6 1393 aaPredicted RBP17.65■□□□□ 0.42
RFTN1-203ENST00000432519 SLC27A2O14975 620 aa17.65■□□□□ 0.42
RFTN1-203ENST00000432519 FAM89AQ96GI7 184 aa17.65■□□□□ 0.42
RFTN1-203ENST00000432519 NEUROD6Q96NK8 337 aa17.65■□□□□ 0.42
RFTN1-203ENST00000432519 GDPD2Q9HCC8 539 aa17.65■□□□□ 0.42
RFTN1-203ENST00000432519 ZSWIM6Q9HCJ5 1215 aa17.65■□□□□ 0.42
RFTN1-203ENST00000432519 SNRKQ9NRH2 765 aa17.65■□□□□ 0.42
RFTN1-203ENST00000432519 KCNJ4P48050 445 aa17.64■□□□□ 0.41
RFTN1-203ENST00000432519 ISCA1Q9BUE6 129 aa17.64■□□□□ 0.41
RFTN1-203ENST00000432519 LIMCH1Q9UPQ0 1083 aa17.64■□□□□ 0.41
RFTN1-203ENST00000432519 ITGB4P16144 1822 aa17.64■□□□□ 0.41
RFTN1-203ENST00000432519 HLFQ16534 295 aa17.64■□□□□ 0.41
RFTN1-203ENST00000432519 SYTL4Q96C24 671 aaPredicted RBP17.63■□□□□ 0.41
RFTN1-203ENST00000432519 PDRG1Q9NUG6 133 aa17.63■□□□□ 0.41
RFTN1-203ENST00000432519 ZNF609O15014 1411 aa17.63■□□□□ 0.41
RFTN1-203ENST00000432519 TAF5LO75529 589 aa17.63■□□□□ 0.41
RFTN1-203ENST00000432519 TCIRG1Q13488 830 aa17.63■□□□□ 0.41
RFTN1-203ENST00000432519 TCHHQ07283 1943 aa17.63■□□□□ 0.41
RFTN1-203ENST00000432519 DISP2A7MBM2 1401 aa17.62■□□□□ 0.41
RFTN1-203ENST00000432519 CCDC83Q8IWF9 413 aa17.62■□□□□ 0.41
RFTN1-203ENST00000432519 GPTP24298 496 aa17.62■□□□□ 0.41
RFTN1-203ENST00000432519 MRE11P49959 708 aa17.62■□□□□ 0.41
RFTN1-203ENST00000432519 NECAB1Q8N987 351 aa17.62■□□□□ 0.41
RFTN1-203ENST00000432519 HAUS7Q99871 368 aa17.62■□□□□ 0.41
RFTN1-203ENST00000432519 HIP1O00291 1037 aa17.61■□□□□ 0.41
RFTN1-203ENST00000432519 PTMSP20962 102 aa17.61■□□□□ 0.41
RFTN1-203ENST00000432519 ME3Q16798 604 aa17.61■□□□□ 0.41
RFTN1-203ENST00000432519 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.61■□□□□ 0.41
RFTN1-203ENST00000432519 TPCN1Q9ULQ1 816 aa17.61■□□□□ 0.41
RFTN1-203ENST00000432519 CYP46A1Q9Y6A2 500 aa17.61■□□□□ 0.41
RFTN1-203ENST00000432519 ROBO1Q9Y6N7 1651 aa17.6■□□□□ 0.41
RFTN1-203ENST00000432519 EYA2O00167 538 aa17.6■□□□□ 0.41
RFTN1-203ENST00000432519 VPS53Q5VIR6 699 aa17.6■□□□□ 0.41
RFTN1-203ENST00000432519 GOLIM4O00461 696 aa17.6■□□□□ 0.41
RFTN1-203ENST00000432519 ZKSCAN1P17029 563 aaPredicted RBP17.6■□□□□ 0.41
RFTN1-203ENST00000432519 TM6SF1Q9BZW5 370 aa17.6■□□□□ 0.41
RFTN1-203ENST00000432519 ZBTB1Q9Y2K1 713 aa17.6■□□□□ 0.41
RFTN1-203ENST00000432519 ZSCAN23Q3MJ62 389 aa17.59■□□□□ 0.41
RFTN1-203ENST00000432519 TMEM63CQ9P1W3 806 aa17.59■□□□□ 0.41
RFTN1-203ENST00000432519 COL16A1Q07092 1604 aaPredicted RBP17.59■□□□□ 0.41
RFTN1-203ENST00000432519 BCL9O00512 1426 aa17.59■□□□□ 0.41
RFTN1-203ENST00000432519 ADAMTS2O95450 1211 aa17.59■□□□□ 0.41
RFTN1-203ENST00000432519 SYT1P21579 422 aa17.59■□□□□ 0.41
RFTN1-203ENST00000432519 JCADQ9P266 1359 aa17.59■□□□□ 0.41
RFTN1-203ENST00000432519 A0A1B0GUL7 405 aa17.58■□□□□ 0.41
RFTN1-203ENST00000432519 IL15P40933 162 aaPredicted RBP17.58■□□□□ 0.41
RFTN1-203ENST00000432519 A0A0G2JLW4 131 aa17.58■□□□□ 0.4
RFTN1-203ENST00000432519 GADD45BO75293 160 aaPredicted RBP17.58■□□□□ 0.4
RFTN1-203ENST00000432519 CYP19A1P11511 503 aaPredicted RBP17.58■□□□□ 0.4
RFTN1-203ENST00000432519 PRIM1P49642 420 aaKnown RBP17.58■□□□□ 0.4
RFTN1-203ENST00000432519 ADORA1P30542 326 aa17.57■□□□□ 0.4
RFTN1-203ENST00000432519 VSIG10Q8N0Z9 540 aa17.57■□□□□ 0.4
RFTN1-203ENST00000432519 KBTBD3Q8NAB2 608 aa17.57■□□□□ 0.4
RFTN1-203ENST00000432519 STARD3NLO95772 234 aa17.56■□□□□ 0.4
RFTN1-203ENST00000432519 MAP3K15Q6ZN16 1313 aa17.56■□□□□ 0.4
RFTN1-203ENST00000432519 EXOC5O00471 708 aa17.56■□□□□ 0.4
RFTN1-203ENST00000432519 GJB2P29033 226 aa17.56■□□□□ 0.4
RFTN1-203ENST00000432519 TOB2Q14106 344 aaPredicted RBP17.56■□□□□ 0.4
RFTN1-203ENST00000432519 TPRNQ4KMQ1 711 aa17.56■□□□□ 0.4
RFTN1-203ENST00000432519 KIF6Q6ZMV9 814 aa17.56■□□□□ 0.4
RFTN1-203ENST00000432519 PAG1Q9NWQ8 432 aa17.56■□□□□ 0.4
RFTN1-203ENST00000432519 SMC3Q9UQE7 1217 aa17.56■□□□□ 0.4
RFTN1-203ENST00000432519 CCDC57Q2TAC2 916 aa17.55■□□□□ 0.4
RFTN1-203ENST00000432519 USPL1Q5W0Q7 1092 aa17.55■□□□□ 0.4
RFTN1-203ENST00000432519 GIGYF2Q6Y7W6 1299 aaKnown RBP17.55■□□□□ 0.4
RFTN1-203ENST00000432519 TBC1D2BQ9UPU7 963 aa17.55■□□□□ 0.4
RFTN1-203ENST00000432519 COL14A1Q05707 1796 aaKnown RBP17.55■□□□□ 0.4
RFTN1-203ENST00000432519 WDR33Q9C0J8 1336 aaKnown RBP17.55■□□□□ 0.4
RFTN1-203ENST00000432519 STX6O43752 255 aa17.55■□□□□ 0.4
RFTN1-203ENST00000432519 CYP21A2P08686 494 aa17.55■□□□□ 0.4
RFTN1-203ENST00000432519 TRIM28Q13263 835 aaKnown RBP17.55■□□□□ 0.4
RFTN1-203ENST00000432519 A0A0G2JS52 829 aa17.55■□□□□ 0.4
RFTN1-203ENST00000432519 PCCAP05165 728 aaPredicted RBP17.55■□□□□ 0.4
RFTN1-203ENST00000432519 SCARF1Q14162 830 aa17.55■□□□□ 0.4
RFTN1-203ENST00000432519 NLRP10Q86W26 655 aa17.55■□□□□ 0.4
RFTN1-203ENST00000432519 RPS6KB1P23443 525 aa17.54■□□□□ 0.4
RFTN1-203ENST00000432519 MCMDC2Q4G0Z9 681 aa17.54■□□□□ 0.4
RFTN1-203ENST00000432519 BLOC1S2Q6QNY1 142 aa17.54■□□□□ 0.4
RFTN1-203ENST00000432519 PI16Q6UXB8 463 aa17.54■□□□□ 0.4
RFTN1-203ENST00000432519 USP48Q86UV5 1035 aa17.54■□□□□ 0.4
RFTN1-203ENST00000432519 ZBTB38Q8NAP3 1195 aaPredicted RBP17.54■□□□□ 0.4
RFTN1-203ENST00000432519 TEX13AQ9BXU3 409 aaPredicted RBP17.54■□□□□ 0.4
RFTN1-203ENST00000432519 CNPY2Q9Y2B0 182 aa17.54■□□□□ 0.4
RFTN1-203ENST00000432519 ZSCAN22P10073 491 aaPredicted RBP17.54■□□□□ 0.4
RFTN1-203ENST00000432519 ZNF445P59923 1031 aa17.54■□□□□ 0.4
RFTN1-203ENST00000432519 ACSBG1Q96GR2 724 aa17.54■□□□□ 0.4
RFTN1-203ENST00000432519 GREM2Q9H772 168 aa17.54■□□□□ 0.4
RFTN1-203ENST00000432519 GPR108Q9NPR9 543 aa17.54■□□□□ 0.4
RFTN1-203ENST00000432519 RRAGDQ9NQL2 400 aaPredicted RBP17.54■□□□□ 0.4
RFTN1-203ENST00000432519 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.54■□□□□ 0.4
RFTN1-203ENST00000432519 CIAO1O76071 339 aa17.53■□□□□ 0.4
RFTN1-203ENST00000432519 CSF1RP07333 972 aa17.53■□□□□ 0.4
RFTN1-203ENST00000432519 STOX1Q6ZVD7 989 aa17.53■□□□□ 0.4
RFTN1-203ENST00000432519 LRRC2Q9BYS8 371 aa17.53■□□□□ 0.4
RFTN1-203ENST00000432519 IFIT1P09914 478 aaKnown RBP17.53■□□□□ 0.4
RFTN1-203ENST00000432519 STK3Q13188 491 aa17.53■□□□□ 0.4
RFTN1-203ENST00000432519 CEP126Q9P2H0 1117 aa17.53■□□□□ 0.4
RFTN1-203ENST00000432519 ISY1Q9ULR0 285 aaKnown RBP17.53■□□□□ 0.4
RFTN1-203ENST00000432519 SYCE3A1L190 88 aa17.52■□□□□ 0.4
RFTN1-203ENST00000432519 RNF20Q5VTR2 975 aa17.52■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms