RNA–Protein interactions for RNA: ENST00000431873.6

ALK-202, Transcript of ALK receptor tyrosine kinase, humanhuman

TSL 5

Gene ALK, Length 2,520 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALK-202ENST00000431873 LRRC59Q96AG4 307 aaKnown RBP11.56□□□□□ -0.56
ALK-202ENST00000431873 KAZALD1Q96I82 304 aa11.56□□□□□ -0.56
ALK-202ENST00000431873 SPATA32Q96LK8 384 aa11.56□□□□□ -0.56
ALK-202ENST00000431873 CTIFO43310 598 aaKnown RBP11.55□□□□□ -0.56
ALK-202ENST00000431873 TOB2Q14106 344 aaPredicted RBP11.55□□□□□ -0.56
ALK-202ENST00000431873 CAMK4Q16566 473 aa11.55□□□□□ -0.56
ALK-202ENST00000431873 PROSER3Q2NL68 480 aa11.55□□□□□ -0.56
ALK-202ENST00000431873 FAM173BQ6P4H8 233 aa11.55□□□□□ -0.56
ALK-202ENST00000431873 ARHGAP30Q7Z6I6 1101 aaPredicted RBP11.55□□□□□ -0.56
ALK-202ENST00000431873 LUZP1Q86V48 1076 aa11.55□□□□□ -0.56
ALK-202ENST00000431873 CLSTN2Q9H4D0 955 aa11.55□□□□□ -0.56
ALK-202ENST00000431873 CBX8Q9HC52 389 aa11.55□□□□□ -0.56
ALK-202ENST00000431873 CAMTA1Q9Y6Y1 1673 aa11.55□□□□□ -0.56
ALK-202ENST00000431873 RIOK3O14730 519 aaKnown RBP11.55□□□□□ -0.56
ALK-202ENST00000431873 DDX58O95786 925 aaKnown RBP11.55□□□□□ -0.56
ALK-202ENST00000431873 CAVIN2O95810 425 aa11.55□□□□□ -0.56
ALK-202ENST00000431873 PTGS1P23219 599 aa11.55□□□□□ -0.56
ALK-202ENST00000431873 COL9A3Q14050 684 aaPredicted RBP11.55□□□□□ -0.56
ALK-202ENST00000431873 ANO6Q4KMQ2 910 aa11.55□□□□□ -0.56
ALK-202ENST00000431873 LARP1Q6PKG0 1096 aaKnown RBP11.55□□□□□ -0.56
ALK-202ENST00000431873 TDRD7Q8NHU6 1098 aaKnown RBP11.55□□□□□ -0.56
ALK-202ENST00000431873 SUCLG2Q96I99 432 aa11.55□□□□□ -0.56
ALK-202ENST00000431873 FSD1Q9BTV5 496 aa11.55□□□□□ -0.56
ALK-202ENST00000431873 CHMP3Q9Y3E7 222 aa11.55□□□□□ -0.56
ALK-202ENST00000431873 KRT32Q14532 448 aa11.54□□□□□ -0.56
ALK-202ENST00000431873 USPL1Q5W0Q7 1092 aa11.54□□□□□ -0.56
ALK-202ENST00000431873 ANKRD24Q8TF21 1146 aa11.54□□□□□ -0.56
ALK-202ENST00000431873 CCDC8Q9H0W5 538 aaPredicted RBP11.54□□□□□ -0.56
ALK-202ENST00000431873 BICC1Q9H694 974 aaKnown RBP11.54□□□□□ -0.56
ALK-202ENST00000431873 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.54□□□□□ -0.56
ALK-202ENST00000431873 UTP14CQ5TAP6 766 aaKnown RBP11.54□□□□□ -0.56
ALK-202ENST00000431873 PLA2G4DQ86XP0 818 aa11.54□□□□□ -0.56
ALK-202ENST00000431873 CKAP2LQ8IYA6 745 aa11.54□□□□□ -0.56
ALK-202ENST00000431873 ANKRD7Q92527 254 aa11.54□□□□□ -0.56
ALK-202ENST00000431873 PXDNQ92626 1479 aa11.54□□□□□ -0.56
ALK-202ENST00000431873 MST1RQ04912 1400 aa11.53□□□□□ -0.56
ALK-202ENST00000431873 RGPD2P0DJD1 1756 aa11.53□□□□□ -0.56
ALK-202ENST00000431873 TAF5LO75529 589 aa11.53□□□□□ -0.56
ALK-202ENST00000431873 ZNF75DP51815 510 aa11.53□□□□□ -0.56
ALK-202ENST00000431873 PDE4CQ08493 712 aa11.53□□□□□ -0.56
ALK-202ENST00000431873 CCDC186Q7Z3E2 898 aa11.53□□□□□ -0.56
ALK-202ENST00000431873 TCEANC2Q96MN5 208 aa11.53□□□□□ -0.56
ALK-202ENST00000431873 BOLA2Q9H3K6 86 aa11.53□□□□□ -0.56
ALK-202ENST00000431873 DDX21Q9NR30 783 aaKnown RBP eCLIP11.53□□□□□ -0.56
ALK-202ENST00000431873 TFIP11Q9UBB9 837 aaKnown RBP11.53□□□□□ -0.56
ALK-202ENST00000431873 ADAMTS7Q9UKP4 1686 aa11.53□□□□□ -0.56
ALK-202ENST00000431873 PPP4R3BQ5MIZ7 849 aa11.53□□□□□ -0.56
ALK-202ENST00000431873 PDCL2Q8N4E4 241 aa11.53□□□□□ -0.56
ALK-202ENST00000431873 TLR7Q9NYK1 1049 aaKnown RBP11.53□□□□□ -0.56
ALK-202ENST00000431873 TAF6LQ9Y6J9 622 aa11.53□□□□□ -0.56
ALK-202ENST00000431873 MRC1P22897 1456 aa11.53□□□□□ -0.56
ALK-202ENST00000431873 ZSCAN20P17040 1043 aaPredicted RBP11.52□□□□□ -0.56
ALK-202ENST00000431873 ZNF165P49910 485 aa11.52□□□□□ -0.56
ALK-202ENST00000431873 ZNF589Q86UQ0 364 aaPredicted RBP11.52□□□□□ -0.56
ALK-202ENST00000431873 GTF3C6Q969F1 213 aa11.52□□□□□ -0.56
ALK-202ENST00000431873 PGBD1Q96JS3 809 aa11.52□□□□□ -0.56
ALK-202ENST00000431873 TRIM5Q9C035 493 aa11.52□□□□□ -0.56
ALK-202ENST00000431873 FAM177BA6PVY3 158 aa11.52□□□□□ -0.57
ALK-202ENST00000431873 NR1I2O75469 434 aa11.52□□□□□ -0.57
ALK-202ENST00000431873 DMTNQ08495 405 aa11.52□□□□□ -0.57
ALK-202ENST00000431873 SYCP1Q15431 976 aa11.52□□□□□ -0.57
ALK-202ENST00000431873 ZSCAN16Q9H4T2 348 aaPredicted RBP11.52□□□□□ -0.57
ALK-202ENST00000431873 SIPA1L3O60292 1781 aaPredicted RBP11.52□□□□□ -0.57
ALK-202ENST00000431873 CDC25BP30305 580 aa11.51□□□□□ -0.57
ALK-202ENST00000431873 RESTQ13127 1097 aa11.51□□□□□ -0.57
ALK-202ENST00000431873 ZSCAN25Q6NSZ9 544 aa11.51□□□□□ -0.57
ALK-202ENST00000431873 DRC7Q8IY82 874 aa11.51□□□□□ -0.57
ALK-202ENST00000431873 CFAP45Q9UL16 551 aa11.51□□□□□ -0.57
ALK-202ENST00000431873 SETD1BQ9UPS6 1966 aaKnown RBP11.51□□□□□ -0.57
ALK-202ENST00000431873 RFX7Q2KHR2 1363 aa11.51□□□□□ -0.57
ALK-202ENST00000431873 PLEKHG2Q9H7P9 1386 aa11.51□□□□□ -0.57
ALK-202ENST00000431873 BICD2Q8TD16 824 aa11.51□□□□□ -0.57
ALK-202ENST00000431873 SMTNL1A8MU46 457 aa11.5□□□□□ -0.57
ALK-202ENST00000431873 IGKV5-2P06315 115 aa11.5□□□□□ -0.57
ALK-202ENST00000431873 ATP5JP18859 108 aa11.5□□□□□ -0.57
ALK-202ENST00000431873 LRMPQ12912 555 aa11.5□□□□□ -0.57
ALK-202ENST00000431873 STK3Q13188 491 aa11.5□□□□□ -0.57
ALK-202ENST00000431873 PDIA6Q15084 440 aa11.5□□□□□ -0.57
ALK-202ENST00000431873 ATP2B3Q16720 1220 aa11.5□□□□□ -0.57
ALK-202ENST00000431873 PPP4R3CPQ6ZMV5 832 aa11.5□□□□□ -0.57
ALK-202ENST00000431873 RBM33Q96EV2 1170 aaKnown RBP11.5□□□□□ -0.57
ALK-202ENST00000431873 NEK1Q96PY6 1258 aa11.5□□□□□ -0.57
ALK-202ENST00000431873 ORAI2Q96SN7 254 aa11.5□□□□□ -0.57
ALK-202ENST00000431873 SIL1Q9H173 461 aa11.5□□□□□ -0.57
ALK-202ENST00000431873 PRAMEF22A3QJZ6 481 aa11.5□□□□□ -0.57
ALK-202ENST00000431873 BRF1Q92994 677 aa11.5□□□□□ -0.57
ALK-202ENST00000431873 PRDM10Q9NQV6 1147 aa11.5□□□□□ -0.57
ALK-202ENST00000431873 NRBP1Q9UHY1 535 aa11.5□□□□□ -0.57
ALK-202ENST00000431873 U3KPZ7 1027 aaPredicted RBP11.5□□□□□ -0.57
ALK-202ENST00000431873 JAK2O60674 1132 aa11.49□□□□□ -0.57
ALK-202ENST00000431873 CBX1P83916 185 aa11.49□□□□□ -0.57
ALK-202ENST00000431873 SARM1Q6SZW1 724 aa11.49□□□□□ -0.57
ALK-202ENST00000431873 LLPHQ9BRT6 129 aaKnown RBP11.49□□□□□ -0.57
ALK-202ENST00000431873 GTPBP4Q9BZE4 634 aaKnown RBP11.49□□□□□ -0.57
ALK-202ENST00000431873 DNAJC25Q9H1X3 360 aa11.49□□□□□ -0.57
ALK-202ENST00000431873 COPRSQ9NQ92 184 aa11.49□□□□□ -0.57
ALK-202ENST00000431873 PAXBP1Q9Y5B6 917 aa11.49□□□□□ -0.57
ALK-202ENST00000431873 TRPM3Q9HCF6 1732 aaPredicted RBP11.49□□□□□ -0.57
ALK-202ENST00000431873 NEURL1BA8MQ27 555 aa11.49□□□□□ -0.57
ALK-202ENST00000431873 CTAGE5O15320 804 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms