RNA–Protein interactions for RNA: ENST00000431640.5

DDX56-204, Transcript of DEAD-box helicase 56, humanhuman

TSL 1 (best) BASIC

Gene DDX56, Length 1,554 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-204ENST00000431640 SKOR2Q2VWA4 1001 aaPredicted RBP15.54■□□□□ 0.08
DDX56-204ENST00000431640 SLC27A3Q5K4L6 730 aa15.54■□□□□ 0.08
DDX56-204ENST00000431640 AACSQ86V21 672 aa15.54■□□□□ 0.08
DDX56-204ENST00000431640 NUP98P52948 1817 aa15.54■□□□□ 0.08
DDX56-204ENST00000431640 HSPA4P34932 840 aa15.53■□□□□ 0.08
DDX56-204ENST00000431640 NEK4P51957 841 aa15.53■□□□□ 0.08
DDX56-204ENST00000431640 RABL6Q3YEC7 729 aaPredicted RBP15.53■□□□□ 0.08
DDX56-204ENST00000431640 CLEC17AQ6ZS10 378 aa15.53■□□□□ 0.08
DDX56-204ENST00000431640 ZBTB3Q9H5J0 574 aa15.53■□□□□ 0.08
DDX56-204ENST00000431640 ANO8Q9HCE9 1232 aaPredicted RBP15.53■□□□□ 0.08
DDX56-204ENST00000431640 A0A087WZG4 1122 aa15.53■□□□□ 0.08
DDX56-204ENST00000431640 GNPATO15228 680 aa15.53■□□□□ 0.08
DDX56-204ENST00000431640 RC3H1Q5TC82 1133 aaKnown RBP15.53■□□□□ 0.08
DDX56-204ENST00000431640 ILDR2Q71H61 639 aa15.53■□□□□ 0.08
DDX56-204ENST00000431640 DIAPH3Q9NSV4 1193 aa15.53■□□□□ 0.08
DDX56-204ENST00000431640 GOLGA6L22H0YM25 854 aa15.52■□□□□ 0.07
DDX56-204ENST00000431640 TRAK2O60296 914 aa15.52■□□□□ 0.07
DDX56-204ENST00000431640 MAP4K4O95819 1239 aaPredicted RBP15.52■□□□□ 0.07
DDX56-204ENST00000431640 HLFQ16534 295 aa15.52■□□□□ 0.07
DDX56-204ENST00000431640 FOXD4L1Q9NU39 408 aa15.52■□□□□ 0.07
DDX56-204ENST00000431640 H7C1W4 665 aa15.51■□□□□ 0.07
DDX56-204ENST00000431640 AKT1S1Q96B36 256 aa15.51■□□□□ 0.07
DDX56-204ENST00000431640 EAF2Q96CJ1 260 aaPredicted RBP15.51■□□□□ 0.07
DDX56-204ENST00000431640 TBC1D2BQ9UPU7 963 aa15.51■□□□□ 0.07
DDX56-204ENST00000431640 MAP3K15Q6ZN16 1313 aa15.51■□□□□ 0.07
DDX56-204ENST00000431640 QSER1Q2KHR3 1735 aa15.5■□□□□ 0.07
DDX56-204ENST00000431640 RPS6KA4O75676 772 aa15.5■□□□□ 0.07
DDX56-204ENST00000431640 CAMTA2O94983 1202 aa15.5■□□□□ 0.07
DDX56-204ENST00000431640 EPHA10Q5JZY3 1008 aa15.5■□□□□ 0.07
DDX56-204ENST00000431640 UBE3BQ7Z3V4 1068 aa15.5■□□□□ 0.07
DDX56-204ENST00000431640 DZIP3Q86Y13 1208 aaKnown RBP15.5■□□□□ 0.07
DDX56-204ENST00000431640 CCDC191Q8NCU4 936 aa15.5■□□□□ 0.07
DDX56-204ENST00000431640 CWC25Q9NXE8 425 aaPredicted RBP15.5■□□□□ 0.07
DDX56-204ENST00000431640 RAD50Q92878 1312 aa15.5■□□□□ 0.07
DDX56-204ENST00000431640 RFX5P48382 616 aaPredicted RBP15.49■□□□□ 0.07
DDX56-204ENST00000431640 INTS4Q96HW7 963 aaKnown RBP15.49■□□□□ 0.07
DDX56-204ENST00000431640 COL24A1Q17RW2 1714 aa15.49■□□□□ 0.07
DDX56-204ENST00000431640 ATP5J2-PTCD1G3V325 749 aa15.49■□□□□ 0.07
DDX56-204ENST00000431640 PHF14O94880 888 aa15.49■□□□□ 0.07
DDX56-204ENST00000431640 CASP7P55210 303 aa15.49■□□□□ 0.07
DDX56-204ENST00000431640 PTPN12Q05209 780 aaKnown RBP15.49■□□□□ 0.07
DDX56-204ENST00000431640 L1TD1Q5T7N2 865 aaKnown RBP15.49■□□□□ 0.07
DDX56-204ENST00000431640 CWC27Q6UX04 472 aaKnown RBP15.49■□□□□ 0.07
DDX56-204ENST00000431640 LSG1Q9H089 658 aaKnown RBP15.49■□□□□ 0.07
DDX56-204ENST00000431640 BCL2L12Q9HB09 334 aa15.49■□□□□ 0.07
DDX56-204ENST00000431640 SRP68Q9UHB9 627 aaKnown RBP15.49■□□□□ 0.07
DDX56-204ENST00000431640 CUL4AQ13619 759 aa15.48■□□□□ 0.07
DDX56-204ENST00000431640 UPF1Q92900 1129 aaKnown RBP eCLIP15.48■□□□□ 0.07
DDX56-204ENST00000431640 TMX3Q96JJ7 454 aa15.48■□□□□ 0.07
DDX56-204ENST00000431640 AK7Q96M32 723 aa15.48■□□□□ 0.07
DDX56-204ENST00000431640 CCDC8Q9H0W5 538 aaPredicted RBP15.48■□□□□ 0.07
DDX56-204ENST00000431640 SIL1Q9H173 461 aa15.48■□□□□ 0.07
DDX56-204ENST00000431640 PALD1Q9ULE6 856 aa15.48■□□□□ 0.07
DDX56-204ENST00000431640 UBN2Q6ZU65 1347 aa15.47■□□□□ 0.07
DDX56-204ENST00000431640 BAG6P46379 1132 aa15.47■□□□□ 0.07
DDX56-204ENST00000431640 ARHGEF1Q92888 912 aaKnown RBP15.47■□□□□ 0.07
DDX56-204ENST00000431640 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.46■□□□□ 0.07
DDX56-204ENST00000431640 CYP2E1P05181 493 aaPredicted RBP15.46■□□□□ 0.07
DDX56-204ENST00000431640 ATP5JP18859 108 aa15.46■□□□□ 0.07
DDX56-204ENST00000431640 GIGYF2Q6Y7W6 1299 aaKnown RBP15.46■□□□□ 0.07
DDX56-204ENST00000431640 KIF6Q6ZMV9 814 aa15.46■□□□□ 0.07
DDX56-204ENST00000431640 TICAM2Q86XR7 235 aa15.46■□□□□ 0.07
DDX56-204ENST00000431640 RTCBQ9Y3I0 505 aaKnown RBP15.46■□□□□ 0.07
DDX56-204ENST00000431640 SSFA2P28290 1259 aa15.45■□□□□ 0.06
DDX56-204ENST00000431640 FOXO4P98177 505 aa15.45■□□□□ 0.06
DDX56-204ENST00000431640 TRIM28Q13263 835 aaKnown RBP15.45■□□□□ 0.06
DDX56-204ENST00000431640 TNNI3KQ59H18 835 aa15.45■□□□□ 0.06
DDX56-204ENST00000431640 LMBR1LQ6UX01 489 aa15.45■□□□□ 0.06
DDX56-204ENST00000431640 ISCA1Q9BUE6 129 aa15.45■□□□□ 0.06
DDX56-204ENST00000431640 GPR108Q9NPR9 543 aa15.45■□□□□ 0.06
DDX56-204ENST00000431640 SNRKQ9NRH2 765 aa15.45■□□□□ 0.06
DDX56-204ENST00000431640 SNX14Q9Y5W7 946 aa15.45■□□□□ 0.06
DDX56-204ENST00000431640 FPGT-TNNI3KV9GXZ4 949 aa15.45■□□□□ 0.06
DDX56-204ENST00000431640 PNPLA7Q6ZV29 1317 aa15.45■□□□□ 0.06
DDX56-204ENST00000431640 BAG4O95429 457 aaKnown RBP15.45■□□□□ 0.06
DDX56-204ENST00000431640 USPL1Q5W0Q7 1092 aa15.45■□□□□ 0.06
DDX56-204ENST00000431640 KLHDC4Q8TBB5 520 aa15.45■□□□□ 0.06
DDX56-204ENST00000431640 KCNB2Q92953 911 aa15.45■□□□□ 0.06
DDX56-204ENST00000431640 ARXQ96QS3 562 aa15.45■□□□□ 0.06
DDX56-204ENST00000431640 IL25Q9H293 177 aa15.45■□□□□ 0.06
DDX56-204ENST00000431640 ISY1Q9ULR0 285 aaKnown RBP15.45■□□□□ 0.06
DDX56-204ENST00000431640 CASZ1Q86V15 1759 aa15.44■□□□□ 0.06
DDX56-204ENST00000431640 ERVV-1B6SEH8 477 aa15.44■□□□□ 0.06
DDX56-204ENST00000431640 TFCP2Q12800 502 aa15.44■□□□□ 0.06
DDX56-204ENST00000431640 SF3B2Q13435 895 aaKnown RBP15.44■□□□□ 0.06
DDX56-204ENST00000431640 TCIRG1Q13488 830 aa15.44■□□□□ 0.06
DDX56-204ENST00000431640 JARID2Q92833 1246 aaPredicted RBP15.44■□□□□ 0.06
DDX56-204ENST00000431640 TM6SF1Q9BZW5 370 aa15.44■□□□□ 0.06
DDX56-204ENST00000431640 BOLA2Q9H3K6 86 aa15.44■□□□□ 0.06
DDX56-204ENST00000431640 DDX60Q8IY21 1712 aaKnown RBP15.43■□□□□ 0.06
DDX56-204ENST00000431640 ZKSCAN1P17029 563 aaPredicted RBP15.43■□□□□ 0.06
DDX56-204ENST00000431640 GPTP24298 496 aa15.43■□□□□ 0.06
DDX56-204ENST00000431640 IL15P40933 162 aaPredicted RBP15.43■□□□□ 0.06
DDX56-204ENST00000431640 FSD1Q9BTV5 496 aa15.43■□□□□ 0.06
DDX56-204ENST00000431640 NARFQ9UHQ1 456 aa15.43■□□□□ 0.06
DDX56-204ENST00000431640 FBXO3Q9UK99 471 aa15.43■□□□□ 0.06
DDX56-204ENST00000431640 LAMB2P55268 1798 aa15.43■□□□□ 0.06
DDX56-204ENST00000431640 COL23A1Q86Y22 540 aaPredicted RBP15.42■□□□□ 0.06
DDX56-204ENST00000431640 ZNF34Q8IZ26 560 aa15.42■□□□□ 0.06
DDX56-204ENST00000431640 ZGPATQ8N5A5 531 aaKnown RBP15.42■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms