RNA–Protein interactions for RNA: ENST00000431540.7

CDH13-203, Transcript of cadherin 13, humanhuman

TSL 1 (best) BASIC

Gene CDH13, Length 831 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-203ENST00000431540 HTRA3P83110 453 aa11□□□□□ -0.65
CDH13-203ENST00000431540 LSM11P83369 360 aaKnown RBP eCLIP11□□□□□ -0.65
CDH13-203ENST00000431540 ADAMTSL1Q8N6G6 1762 aa11□□□□□ -0.65
CDH13-203ENST00000431540 TMEM88BA6NKF7 163 aa10.99□□□□□ -0.65
CDH13-203ENST00000431540 U2AF1L5P0DN76 240 aaPredicted RBP10.99□□□□□ -0.65
CDH13-203ENST00000431540 U2AF1Q01081 240 aaKnown RBP eCLIP10.99□□□□□ -0.65
CDH13-203ENST00000431540 JDP2Q8WYK2 163 aa10.99□□□□□ -0.65
CDH13-203ENST00000431540 HACL1Q9UJ83 578 aa10.99□□□□□ -0.65
CDH13-203ENST00000431540 NIP7Q9Y221 180 aaKnown RBP eCLIP10.99□□□□□ -0.65
CDH13-203ENST00000431540 ZNF330Q9Y3S2 320 aaPredicted RBP10.99□□□□□ -0.65
CDH13-203ENST00000431540 CNTNAP1P78357 1384 aa10.99□□□□□ -0.65
CDH13-203ENST00000431540 KDM3BQ7LBC6 1761 aa10.98□□□□□ -0.65
CDH13-203ENST00000431540 NBPF26B4DH59 902 aa10.98□□□□□ -0.65
CDH13-203ENST00000431540 KCNQ3O43525 872 aa10.98□□□□□ -0.65
CDH13-203ENST00000431540 GTF2E1P29083 439 aaPredicted RBP10.98□□□□□ -0.65
CDH13-203ENST00000431540 PPP2R1AP30153 589 aa10.98□□□□□ -0.65
CDH13-203ENST00000431540 IARSP41252 1262 aaKnown RBP10.98□□□□□ -0.65
CDH13-203ENST00000431540 NBPF10Q6P3W6 841 aaKnown RBP10.98□□□□□ -0.65
CDH13-203ENST00000431540 NBPF15Q8N660 670 aa10.98□□□□□ -0.65
CDH13-203ENST00000431540 CRAMP1Q96RY5 1269 aa10.98□□□□□ -0.65
CDH13-203ENST00000431540 RNF123Q5XPI4 1314 aa10.98□□□□□ -0.65
CDH13-203ENST00000431540 RASSF10A6NK89 507 aa10.97□□□□□ -0.65
CDH13-203ENST00000431540 HCSTQ9UBK5 93 aa10.97□□□□□ -0.65
CDH13-203ENST00000431540 ANKRD36CQ5JPF3 1778 aa10.96□□□□□ -0.65
CDH13-203ENST00000431540 MAP3K15Q6ZN16 1313 aa10.96□□□□□ -0.65
CDH13-203ENST00000431540 EPHX2P34913 555 aa10.96□□□□□ -0.65
CDH13-203ENST00000431540 CTCFP49711 727 aaPredicted RBP10.96□□□□□ -0.65
CDH13-203ENST00000431540 EIF6P56537 245 aaKnown RBP10.96□□□□□ -0.65
CDH13-203ENST00000431540 MAP2K1Q02750 393 aaPredicted RBP10.96□□□□□ -0.65
CDH13-203ENST00000431540 PARP10Q53GL7 1025 aa10.96□□□□□ -0.65
CDH13-203ENST00000431540 SLC10A5Q5PT55 438 aa10.96□□□□□ -0.65
CDH13-203ENST00000431540 TMEM92Q6UXU6 159 aa10.96□□□□□ -0.65
CDH13-203ENST00000431540 SYNE4Q8N205 404 aa10.96□□□□□ -0.65
CDH13-203ENST00000431540 TMX4Q9H1E5 349 aaPredicted RBP10.96□□□□□ -0.65
CDH13-203ENST00000431540 SNED1Q8TER0 1413 aa10.95□□□□□ -0.66
CDH13-203ENST00000431540 DEFB115Q30KQ5 88 aa10.95□□□□□ -0.66
CDH13-203ENST00000431540 KIF6Q6ZMV9 814 aa10.95□□□□□ -0.66
CDH13-203ENST00000431540 USP50Q70EL3 339 aaPredicted RBP10.95□□□□□ -0.66
CDH13-203ENST00000431540 MCM10Q7L590 875 aa10.95□□□□□ -0.66
CDH13-203ENST00000431540 PPP1R42Q7Z4L9 355 aa10.95□□□□□ -0.66
CDH13-203ENST00000431540 ZNF34Q8IZ26 560 aa10.95□□□□□ -0.66
CDH13-203ENST00000431540 CNTROBQ8N137 903 aa10.95□□□□□ -0.66
CDH13-203ENST00000431540 AIDAQ96BJ3 306 aa10.95□□□□□ -0.66
CDH13-203ENST00000431540 RBM17Q96I25 401 aaKnown RBP10.95□□□□□ -0.66
CDH13-203ENST00000431540 WBP1LQ9NX94 342 aa10.95□□□□□ -0.66
CDH13-203ENST00000431540 BBOX1O75936 387 aa10.94□□□□□ -0.66
CDH13-203ENST00000431540 EIF4A1P60842 406 aaKnown RBP10.94□□□□□ -0.66
CDH13-203ENST00000431540 GIGYF2Q6Y7W6 1299 aaKnown RBP10.94□□□□□ -0.66
CDH13-203ENST00000431540 SUPT20HQ8NEM7 779 aa10.94□□□□□ -0.66
CDH13-203ENST00000431540 HHIPL1Q96JK4 782 aa10.94□□□□□ -0.66
CDH13-203ENST00000431540 CDHR2Q9BYE9 1310 aa10.93□□□□□ -0.66
CDH13-203ENST00000431540 ZNF316A6NFI3 1004 aaPredicted RBP10.93□□□□□ -0.66
CDH13-203ENST00000431540 LMOD1P29536 600 aaPredicted RBP10.93□□□□□ -0.66
CDH13-203ENST00000431540 ECE1P42892 770 aa10.93□□□□□ -0.66
CDH13-203ENST00000431540 HLFQ16534 295 aa10.93□□□□□ -0.66
CDH13-203ENST00000431540 ARSIQ5FYB1 569 aa10.93□□□□□ -0.66
CDH13-203ENST00000431540 TMC4Q7Z404 712 aa10.93□□□□□ -0.66
CDH13-203ENST00000431540 CCDC24Q8N4L8 307 aa10.93□□□□□ -0.66
CDH13-203ENST00000431540 ZC3H15Q8WU90 426 aaKnown RBP10.93□□□□□ -0.66
CDH13-203ENST00000431540 RPGRQ92834 1020 aaKnown RBP10.93□□□□□ -0.66
CDH13-203ENST00000431540 NLRP3Q96P20 1036 aa10.93□□□□□ -0.66
CDH13-203ENST00000431540 PLEKHF1Q96S99 279 aa10.93□□□□□ -0.66
CDH13-203ENST00000431540 RTFDC1Q9BY42 306 aaPredicted RBP10.93□□□□□ -0.66
CDH13-203ENST00000431540 ZNF277Q9NRM2 450 aaPredicted RBP10.93□□□□□ -0.66
CDH13-203ENST00000431540 PRAMEF22A3QJZ6 481 aa10.92□□□□□ -0.66
CDH13-203ENST00000431540 MAP2K2P36507 400 aa10.92□□□□□ -0.66
CDH13-203ENST00000431540 VEGFBP49765 207 aa10.92□□□□□ -0.66
CDH13-203ENST00000431540 NFE2L2Q16236 605 aa10.92□□□□□ -0.66
CDH13-203ENST00000431540 HSP90AB3PQ58FF7 597 aa10.92□□□□□ -0.66
CDH13-203ENST00000431540 MKRN1Q9UHC7 482 aaKnown RBP10.92□□□□□ -0.66
CDH13-203ENST00000431540 PGAP2Q9UHJ9 254 aa10.92□□□□□ -0.66
CDH13-203ENST00000431540 CA12O43570 354 aa10.91□□□□□ -0.66
CDH13-203ENST00000431540 SP8Q8IXZ3 490 aa10.91□□□□□ -0.66
CDH13-203ENST00000431540 ATP6V0A2Q9Y487 856 aa10.91□□□□□ -0.66
CDH13-203ENST00000431540 WDR33Q9C0J8 1336 aaKnown RBP10.9□□□□□ -0.66
CDH13-203ENST00000431540 ZNF541Q9H0D2 1346 aa10.9□□□□□ -0.66
CDH13-203ENST00000431540 FOXN1O15353 648 aa10.9□□□□□ -0.66
CDH13-203ENST00000431540 LMOD3Q0VAK6 560 aa10.9□□□□□ -0.66
CDH13-203ENST00000431540 DCTN1Q14203 1278 aa10.9□□□□□ -0.66
CDH13-203ENST00000431540 EAPPQ56P03 285 aaPredicted RBP10.9□□□□□ -0.66
CDH13-203ENST00000431540 DDX21Q9NR30 783 aaKnown RBP eCLIP10.9□□□□□ -0.66
CDH13-203ENST00000431540 POLR2AP24928 1970 aaKnown RBP10.9□□□□□ -0.66
CDH13-203ENST00000431540 NTSR2O95665 410 aa10.89□□□□□ -0.67
CDH13-203ENST00000431540 TNIP1Q15025 636 aa10.89□□□□□ -0.67
CDH13-203ENST00000431540 SUSD4Q5VX71 490 aa10.89□□□□□ -0.67
CDH13-203ENST00000431540 MICALL2Q8IY33 904 aa10.89□□□□□ -0.67
CDH13-203ENST00000431540 LARGE2Q8N3Y3 721 aa10.89□□□□□ -0.67
CDH13-203ENST00000431540 UTP14AQ9BVJ6 771 aaKnown RBP10.89□□□□□ -0.67
CDH13-203ENST00000431540 ADARB2Q9NS39 739 aaKnown RBP10.89□□□□□ -0.67
CDH13-203ENST00000431540 ZNRF3Q9ULT6 936 aa10.89□□□□□ -0.67
CDH13-203ENST00000431540 RRP7AQ9Y3A4 280 aaKnown RBP10.89□□□□□ -0.67
CDH13-203ENST00000431540 MAPK8IP3Q9UPT6 1336 aa10.88□□□□□ -0.67
CDH13-203ENST00000431540 THSD7BQ9C0I4 1608 aa10.88□□□□□ -0.67
CDH13-203ENST00000431540 PIP4K2AP48426 406 aaPredicted RBP10.88□□□□□ -0.67
CDH13-203ENST00000431540 RALBP1Q15311 655 aa10.88□□□□□ -0.67
CDH13-203ENST00000431540 NIM1KQ8IY84 436 aa10.88□□□□□ -0.67
CDH13-203ENST00000431540 BEGAINQ9BUH8 593 aa10.88□□□□□ -0.67
CDH13-203ENST00000431540 CHMP4AQ9BY43 222 aa10.88□□□□□ -0.67
CDH13-203ENST00000431540 PPEF1O14829 653 aaPredicted RBP10.87□□□□□ -0.67
CDH13-203ENST00000431540 HOXB7P09629 217 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms