RNA–Protein interactions for RNA: ENST00000431374.6

TSPAN9-203, Transcript of tetraspanin 9, humanhuman

TSL 4

Gene TSPAN9, Length 558 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN9-203ENST00000431374 TMC4Q7Z404 712 aa19.53■□□□□ 0.72
TSPAN9-203ENST00000431374 TRMT2AQ8IZ69 625 aaKnown RBP19.53■□□□□ 0.72
TSPAN9-203ENST00000431374 CELF1Q92879 486 aaKnown RBP19.53■□□□□ 0.72
TSPAN9-203ENST00000431374 RRAGCQ9HB90 399 aa19.53■□□□□ 0.72
TSPAN9-203ENST00000431374 TIAM2Q8IVF5 1701 aa19.52■□□□□ 0.72
TSPAN9-203ENST00000431374 DDX60Q8IY21 1712 aaKnown RBP19.52■□□□□ 0.72
TSPAN9-203ENST00000431374 GCKRQ14397 625 aa19.52■□□□□ 0.72
TSPAN9-203ENST00000431374 DPY19L2Q6NUT2 758 aa19.52■□□□□ 0.72
TSPAN9-203ENST00000431374 LINS1Q8NG48 757 aa19.52■□□□□ 0.72
TSPAN9-203ENST00000431374 F6X3S4 739 aa19.51■□□□□ 0.71
TSPAN9-203ENST00000431374 H7C1W4 665 aa19.51■□□□□ 0.71
TSPAN9-203ENST00000431374 CCDC152Q4G0S7 254 aa19.51■□□□□ 0.71
TSPAN9-203ENST00000431374 RTFDC1Q9BY42 306 aaPredicted RBP19.51■□□□□ 0.71
TSPAN9-203ENST00000431374 TOMM70O94826 608 aa19.5■□□□□ 0.71
TSPAN9-203ENST00000431374 CTSWP56202 376 aa19.5■□□□□ 0.71
TSPAN9-203ENST00000431374 DPP8Q6V1X1 898 aaPredicted RBP19.5■□□□□ 0.71
TSPAN9-203ENST00000431374 UBE3BQ7Z3V4 1068 aa19.5■□□□□ 0.71
TSPAN9-203ENST00000431374 MPNDQ8N594 471 aa19.5■□□□□ 0.71
TSPAN9-203ENST00000431374 SEC31BQ9NQW1 1179 aa19.5■□□□□ 0.71
TSPAN9-203ENST00000431374 ZNF541Q9H0D2 1346 aa19.5■□□□□ 0.71
TSPAN9-203ENST00000431374 LAMB2P55268 1798 aa19.49■□□□□ 0.71
TSPAN9-203ENST00000431374 FZD9O00144 591 aa19.49■□□□□ 0.71
TSPAN9-203ENST00000431374 DDNO94850 711 aaPredicted RBP19.49■□□□□ 0.71
TSPAN9-203ENST00000431374 BEND3Q5T5X7 828 aa19.49■□□□□ 0.71
TSPAN9-203ENST00000431374 MRPL50Q8N5N7 158 aaKnown RBP19.49■□□□□ 0.71
TSPAN9-203ENST00000431374 POTECB2RU33 542 aa19.48■□□□□ 0.71
TSPAN9-203ENST00000431374 VEGFAP15692 232 aaPredicted RBP19.48■□□□□ 0.71
TSPAN9-203ENST00000431374 CASP7P55210 303 aa19.48■□□□□ 0.71
TSPAN9-203ENST00000431374 RPS8P62241 208 aaKnown RBP19.48■□□□□ 0.71
TSPAN9-203ENST00000431374 C16orf71Q8IYS4 520 aaPredicted RBP19.48■□□□□ 0.71
TSPAN9-203ENST00000431374 LARGE2Q8N3Y3 721 aa19.48■□□□□ 0.71
TSPAN9-203ENST00000431374 SUPT20HQ8NEM7 779 aa19.48■□□□□ 0.71
TSPAN9-203ENST00000431374 JDP2Q8WYK2 163 aa19.48■□□□□ 0.71
TSPAN9-203ENST00000431374 SSH1Q8WYL5 1049 aa19.48■□□□□ 0.71
TSPAN9-203ENST00000431374 CCDC85AQ96PX6 553 aaPredicted RBP19.48■□□□□ 0.71
TSPAN9-203ENST00000431374 COL4A1P02462 1669 aa19.48■□□□□ 0.71
TSPAN9-203ENST00000431374 COL4A5P29400 1685 aa19.47■□□□□ 0.71
TSPAN9-203ENST00000431374 PPIP5K2O43314 1243 aa19.47■□□□□ 0.71
TSPAN9-203ENST00000431374 TTLL11Q8NHH1 800 aa19.47■□□□□ 0.71
TSPAN9-203ENST00000431374 RBM46Q8TBY0 533 aaKnown RBP19.47■□□□□ 0.71
TSPAN9-203ENST00000431374 PLA2G12BQ9BX93 195 aa19.47■□□□□ 0.71
TSPAN9-203ENST00000431374 VPS33BQ9H267 617 aa19.47■□□□□ 0.71
TSPAN9-203ENST00000431374 AOC3Q16853 763 aa19.46■□□□□ 0.71
TSPAN9-203ENST00000431374 L3MBTL3Q96JM7 780 aaPredicted RBP19.46■□□□□ 0.71
TSPAN9-203ENST00000431374 RTL9Q8NET4 1388 aa19.45■□□□□ 0.7
TSPAN9-203ENST00000431374 NIM1KQ8IY84 436 aa19.45■□□□□ 0.7
TSPAN9-203ENST00000431374 GREM2Q9H772 168 aa19.45■□□□□ 0.7
TSPAN9-203ENST00000431374 DICER1Q9UPY3 1922 aaKnown RBP19.45■□□□□ 0.7
TSPAN9-203ENST00000431374 CT47B1P0C2W7 299 aaPredicted RBP19.44■□□□□ 0.7
TSPAN9-203ENST00000431374 GPSM2P81274 684 aa19.44■□□□□ 0.7
TSPAN9-203ENST00000431374 KIAA2012Q0VF49 1180 aa19.44■□□□□ 0.7
TSPAN9-203ENST00000431374 ALDH1L2Q3SY69 923 aa19.44■□□□□ 0.7
TSPAN9-203ENST00000431374 BCL2L13Q9BXK5 485 aa19.44■□□□□ 0.7
TSPAN9-203ENST00000431374 NSFL1CQ9UNZ2 370 aaKnown RBP19.44■□□□□ 0.7
TSPAN9-203ENST00000431374 WDR90Q96KV7 1748 aa19.44■□□□□ 0.7
TSPAN9-203ENST00000431374 DUOX1Q9NRD9 1551 aa19.44■□□□□ 0.7
TSPAN9-203ENST00000431374 ALDH1L1O75891 902 aa19.43■□□□□ 0.7
TSPAN9-203ENST00000431374 EIF6P56537 245 aaKnown RBP19.43■□□□□ 0.7
TSPAN9-203ENST00000431374 SLC4A10Q6U841 1118 aa19.43■□□□□ 0.7
TSPAN9-203ENST00000431374 ANKRD18AQ8IVF6 992 aa19.43■□□□□ 0.7
TSPAN9-203ENST00000431374 CDC5LQ99459 802 aaKnown RBP19.43■□□□□ 0.7
TSPAN9-203ENST00000431374 PTPRCP08575 1304 aa19.43■□□□□ 0.7
TSPAN9-203ENST00000431374 CCDC88AQ3V6T2 1871 aa19.43■□□□□ 0.7
TSPAN9-203ENST00000431374 LRRC37AA6NMS7 1700 aa19.42■□□□□ 0.7
TSPAN9-203ENST00000431374 GRM8O00222 908 aa19.42■□□□□ 0.7
TSPAN9-203ENST00000431374 FSTL1Q12841 308 aa19.42■□□□□ 0.7
TSPAN9-203ENST00000431374 GPC2Q8N158 579 aa19.42■□□□□ 0.7
TSPAN9-203ENST00000431374 SRCIN1Q9C0H9 1055 aa19.42■□□□□ 0.7
TSPAN9-203ENST00000431374 SMC4Q9NTJ3 1288 aa19.42■□□□□ 0.7
TSPAN9-203ENST00000431374 POLLQ9UGP5 575 aa19.42■□□□□ 0.7
TSPAN9-203ENST00000431374 CACNA1FO60840 1977 aa19.41■□□□□ 0.7
TSPAN9-203ENST00000431374 IQCA1LA6NCM1 817 aa19.41■□□□□ 0.7
TSPAN9-203ENST00000431374 CSF1RP07333 972 aa19.41■□□□□ 0.7
TSPAN9-203ENST00000431374 HSPA6P17066 643 aa19.41■□□□□ 0.7
TSPAN9-203ENST00000431374 PODXL2Q9NZ53 605 aa19.41■□□□□ 0.7
TSPAN9-203ENST00000431374 ZNRF3Q9ULT6 936 aa19.41■□□□□ 0.7
TSPAN9-203ENST00000431374 HNRNPUQ00839 825 aaKnown RBP eCLIP19.4■□□□□ 0.7
TSPAN9-203ENST00000431374 FAM161AQ3B820 660 aa19.4■□□□□ 0.7
TSPAN9-203ENST00000431374 SMC1BQ8NDV3 1235 aa19.4■□□□□ 0.7
TSPAN9-203ENST00000431374 TBC1D16Q8TBP0 767 aa19.4■□□□□ 0.7
TSPAN9-203ENST00000431374 C6orf229H3BNL8 230 aa19.39■□□□□ 0.69
TSPAN9-203ENST00000431374 FOXO4P98177 505 aa19.39■□□□□ 0.69
TSPAN9-203ENST00000431374 TAF1DQ9H5J8 278 aaPredicted RBP19.39■□□□□ 0.69
TSPAN9-203ENST00000431374 BSDC1Q9NW68 430 aaPredicted RBP19.39■□□□□ 0.69
TSPAN9-203ENST00000431374 GJA3Q9Y6H8 435 aa19.39■□□□□ 0.69
TSPAN9-203ENST00000431374 TAF1P21675 1872 aa19.39■□□□□ 0.69
TSPAN9-203ENST00000431374 ITGA6P23229 1130 aa19.38■□□□□ 0.69
TSPAN9-203ENST00000431374 WASHC4Q2M389 1173 aa19.38■□□□□ 0.69
TSPAN9-203ENST00000431374 EYA3Q99504 573 aa19.38■□□□□ 0.69
TSPAN9-203ENST00000431374 C9orf78Q9NZ63 289 aaPredicted RBP19.38■□□□□ 0.69
TSPAN9-203ENST00000431374 ANKIB1Q9P2G1 1089 aa19.38■□□□□ 0.69
TSPAN9-203ENST00000431374 HACL1Q9UJ83 578 aa19.38■□□□□ 0.69
TSPAN9-203ENST00000431374 GGA1Q9UJY5 639 aa19.38■□□□□ 0.69
TSPAN9-203ENST00000431374 XDHP47989 1333 aa19.37■□□□□ 0.69
TSPAN9-203ENST00000431374 UFL1O94874 794 aa19.37■□□□□ 0.69
TSPAN9-203ENST00000431374 BRPF1P55201 1214 aaPredicted RBP19.37■□□□□ 0.69
TSPAN9-203ENST00000431374 CXCL9Q07325 125 aa19.37■□□□□ 0.69
TSPAN9-203ENST00000431374 EPHA10Q5JZY3 1008 aa19.37■□□□□ 0.69
TSPAN9-203ENST00000431374 GPR101Q96P66 508 aaPredicted RBP19.37■□□□□ 0.69
TSPAN9-203ENST00000431374 CEP350Q5VT06 3117 aa19.36■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 440.6 ms