RNA–Protein interactions for RNA: ENST00000430591.1

SMC6-205, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 5

Gene SMC6, Length 480 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-205ENST00000430591 LMOD3Q0VAK6 560 aa8.63□□□□□ -1.03
SMC6-205ENST00000430591 AIMP1Q12904 312 aaKnown RBP8.63□□□□□ -1.03
SMC6-205ENST00000430591 DUSP27Q5VZP5 1158 aa8.63□□□□□ -1.03
SMC6-205ENST00000430591 PRR5LQ6MZQ0 368 aa8.63□□□□□ -1.03
SMC6-205ENST00000430591 POTEEQ6S8J3 1075 aa8.63□□□□□ -1.03
SMC6-205ENST00000430591 WWC1Q8IX03 1113 aa8.63□□□□□ -1.03
SMC6-205ENST00000430591 CHPF2Q9P2E5 772 aa8.63□□□□□ -1.03
SMC6-205ENST00000430591 TAF1P21675 1872 aa8.62□□□□□ -1.03
SMC6-205ENST00000430591 UBN2Q6ZU65 1347 aa8.62□□□□□ -1.03
SMC6-205ENST00000430591 SLX4Q8IY92 1834 aa8.62□□□□□ -1.03
SMC6-205ENST00000430591 SYNE4Q8N205 404 aa8.62□□□□□ -1.03
SMC6-205ENST00000430591 XAGE3Q8WTP9 111 aa8.62□□□□□ -1.03
SMC6-205ENST00000430591 CFAP44Q96MT7 982 aa8.62□□□□□ -1.03
SMC6-205ENST00000430591 BCS1LQ9Y276 419 aa8.62□□□□□ -1.03
SMC6-205ENST00000430591 ARFGEF2Q9Y6D5 1785 aa8.62□□□□□ -1.03
SMC6-205ENST00000430591 ARFGEF1Q9Y6D6 1849 aa8.61□□□□□ -1.03
SMC6-205ENST00000430591 LAMB2P55268 1798 aa8.61□□□□□ -1.03
SMC6-205ENST00000430591 A0A087WZG4 1122 aa8.61□□□□□ -1.03
SMC6-205ENST00000430591 YY1P25490 414 aa8.61□□□□□ -1.03
SMC6-205ENST00000430591 PRELPP51888 382 aa8.61□□□□□ -1.03
SMC6-205ENST00000430591 MMRN1Q13201 1228 aa8.61□□□□□ -1.03
SMC6-205ENST00000430591 OLFM4Q6UX06 510 aa8.61□□□□□ -1.03
SMC6-205ENST00000430591 NUTM1Q86Y26 1132 aa8.61□□□□□ -1.03
SMC6-205ENST00000430591 PHAXQ9H814 394 aaKnown RBP8.61□□□□□ -1.03
SMC6-205ENST00000430591 IFT57Q9NWB7 429 aa8.61□□□□□ -1.03
SMC6-205ENST00000430591 CCDC88AQ3V6T2 1871 aa8.61□□□□□ -1.03
SMC6-205ENST00000430591 MAP3K15Q6ZN16 1313 aa8.6□□□□□ -1.03
SMC6-205ENST00000430591 RASSF7Q02833 373 aa8.6□□□□□ -1.03
SMC6-205ENST00000430591 HDGFL1Q5TGJ6 251 aa8.6□□□□□ -1.03
SMC6-205ENST00000430591 SUSD4Q5VX71 490 aa8.6□□□□□ -1.03
SMC6-205ENST00000430591 COPS6Q7L5N1 327 aa8.6□□□□□ -1.03
SMC6-205ENST00000430591 G2E3Q7L622 706 aa8.6□□□□□ -1.03
SMC6-205ENST00000430591 SPRYD3Q8NCJ5 442 aa8.6□□□□□ -1.03
SMC6-205ENST00000430591 EMILIN3Q9NT22 766 aa8.6□□□□□ -1.03
SMC6-205ENST00000430591 NIP7Q9Y221 180 aaKnown RBP eCLIP8.6□□□□□ -1.03
SMC6-205ENST00000430591 SBF1O95248 1867 aa8.6□□□□□ -1.03
SMC6-205ENST00000430591 FANCIQ9NVI1 1328 aa8.59□□□□□ -1.03
SMC6-205ENST00000430591 GNAI1P63096 354 aa8.59□□□□□ -1.03
SMC6-205ENST00000430591 ERFEQ4G0M1 354 aa8.59□□□□□ -1.03
SMC6-205ENST00000430591 PAXIP1Q6ZW49 1069 aaPredicted RBP8.59□□□□□ -1.03
SMC6-205ENST00000430591 C2CD5Q86YS7 1000 aa8.59□□□□□ -1.03
SMC6-205ENST00000430591 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.59□□□□□ -1.03
SMC6-205ENST00000430591 DDX60Q8IY21 1712 aaKnown RBP8.58□□□□□ -1.04
SMC6-205ENST00000430591 HMGB2P26583 209 aaKnown RBP8.58□□□□□ -1.04
SMC6-205ENST00000430591 TGFB2P61812 414 aa8.58□□□□□ -1.04
SMC6-205ENST00000430591 EXOSC9Q06265 439 aaKnown RBP8.58□□□□□ -1.04
SMC6-205ENST00000430591 DIEXFQ68CQ4 756 aaKnown RBP8.58□□□□□ -1.04
SMC6-205ENST00000430591 NBPF5PQ86XG9 351 aaPredicted RBP8.58□□□□□ -1.04
SMC6-205ENST00000430591 ZNF34Q8IZ26 560 aa8.58□□□□□ -1.04
SMC6-205ENST00000430591 JARID2Q92833 1246 aaPredicted RBP8.58□□□□□ -1.04
SMC6-205ENST00000430591 CDCA7LQ96GN5 454 aa8.58□□□□□ -1.04
SMC6-205ENST00000430591 SETDB2Q96T68 719 aa8.58□□□□□ -1.04
SMC6-205ENST00000430591 DDX21Q9NR30 783 aaKnown RBP eCLIP8.58□□□□□ -1.04
SMC6-205ENST00000430591 BABAM1Q9NWV8 329 aa8.58□□□□□ -1.04
SMC6-205ENST00000430591 ZNF521Q96K83 1311 aa8.57□□□□□ -1.04
SMC6-205ENST00000430591 ATP10DQ9P241 1426 aa8.57□□□□□ -1.04
SMC6-205ENST00000430591 ATP5J2-PTCD1G3V325 749 aa8.57□□□□□ -1.04
SMC6-205ENST00000430591 NTSR2O95665 410 aa8.57□□□□□ -1.04
SMC6-205ENST00000430591 CCDC27Q2M243 656 aa8.57□□□□□ -1.04
SMC6-205ENST00000430591 RTL5Q5HYW3 569 aaPredicted RBP8.57□□□□□ -1.04
SMC6-205ENST00000430591 GIGYF2Q6Y7W6 1299 aaKnown RBP8.57□□□□□ -1.04
SMC6-205ENST00000430591 KIF6Q6ZMV9 814 aa8.57□□□□□ -1.04
SMC6-205ENST00000430591 CNBD1Q8NA66 436 aa8.57□□□□□ -1.04
SMC6-205ENST00000430591 ZNF526Q8TF50 670 aaPredicted RBP8.57□□□□□ -1.04
SMC6-205ENST00000430591 ZNF622Q969S3 477 aaKnown RBP eCLIP8.57□□□□□ -1.044e-9■□□□□ 10.2
SMC6-205ENST00000430591 FER1L6Q2WGJ9 1857 aa8.56□□□□□ -1.04
SMC6-205ENST00000430591 TBC1D12O60347 775 aa8.56□□□□□ -1.04
SMC6-205ENST00000430591 ARHGAP27Q6ZUM4 889 aa8.56□□□□□ -1.04
SMC6-205ENST00000430591 NPM2Q86SE8 214 aaKnown RBP8.56□□□□□ -1.04
SMC6-205ENST00000430591 ZNF784Q8NCA9 323 aaPredicted RBP8.56□□□□□ -1.04
SMC6-205ENST00000430591 PIM2Q9P1W9 311 aa8.56□□□□□ -1.04
SMC6-205ENST00000430591 ERBB4Q15303 1308 aa8.55□□□□□ -1.04
SMC6-205ENST00000430591 TIAM2Q8IVF5 1701 aa8.55□□□□□ -1.04
SMC6-205ENST00000430591 ERVV-1B6SEH8 477 aa8.55□□□□□ -1.04
SMC6-205ENST00000430591 NFKBIEO00221 500 aa8.55□□□□□ -1.04
SMC6-205ENST00000430591 NPHP1O15259 732 aa8.55□□□□□ -1.04
SMC6-205ENST00000430591 C21orf2O43822 256 aa8.55□□□□□ -1.04
SMC6-205ENST00000430591 SRGNP10124 158 aa8.55□□□□□ -1.04
SMC6-205ENST00000430591 HCLS1P14317 486 aaPredicted RBP8.55□□□□□ -1.04
SMC6-205ENST00000430591 TWISTNBQ3B726 338 aaPredicted RBP8.55□□□□□ -1.04
SMC6-205ENST00000430591 DALRD3Q5D0E6 543 aaKnown RBP8.55□□□□□ -1.04
SMC6-205ENST00000430591 CLEC4GQ6UXB4 293 aa8.55□□□□□ -1.04
SMC6-205ENST00000430591 NLRP10Q86W26 655 aa8.55□□□□□ -1.04
SMC6-205ENST00000430591 BRIP1Q9BX63 1249 aa8.55□□□□□ -1.04
SMC6-205ENST00000430591 ZNF652Q9Y2D9 606 aa8.55□□□□□ -1.04
SMC6-205ENST00000430591 ADCY9O60503 1353 aa8.55□□□□□ -1.04
SMC6-205ENST00000430591 H0YIN7 160 aa8.54□□□□□ -1.04
SMC6-205ENST00000430591 VAMP4O75379 141 aa8.54□□□□□ -1.04
SMC6-205ENST00000430591 HOXB7P09629 217 aa8.54□□□□□ -1.04
SMC6-205ENST00000430591 LSM11P83369 360 aaKnown RBP eCLIP8.54□□□□□ -1.04
SMC6-205ENST00000430591 CAMK2BQ13554 666 aa8.54□□□□□ -1.04
SMC6-205ENST00000430591 DBF4Q9UBU7 674 aaPredicted RBP8.54□□□□□ -1.04
SMC6-205ENST00000430591 IL16Q14005 1332 aa8.54□□□□□ -1.04
SMC6-205ENST00000430591 COL4A5P29400 1685 aa8.53□□□□□ -1.04
SMC6-205ENST00000430591 SPEF2Q9C093 1822 aa8.53□□□□□ -1.04
SMC6-205ENST00000430591 GRIN3BO60391 1043 aa8.53□□□□□ -1.04
SMC6-205ENST00000430591 ST5P78524 1137 aa8.53□□□□□ -1.04
SMC6-205ENST00000430591 TCIRG1Q13488 830 aa8.53□□□□□ -1.04
SMC6-205ENST00000430591 PRPF40BQ6NWY9 871 aaKnown RBP8.53□□□□□ -1.04
SMC6-205ENST00000430591 ANKRD13DQ6ZTN6 518 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 118.4 ms