RNA–Protein interactions for RNA: ENST00000430335.1

CSNK1E-207, Transcript of casein kinase 1 epsilon, humanhuman

TSL 5

Gene CSNK1E, Length 996 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-207ENST00000430335 GRAPQ13588 217 aa25.34■■□□□ 1.65
CSNK1E-207ENST00000430335 SOGA3Q5TF21 947 aa25.34■■□□□ 1.65
CSNK1E-207ENST00000430335 GRAPLQ8TC17 118 aaPredicted RBP25.34■■□□□ 1.65
CSNK1E-207ENST00000430335 SLX4Q8IY92 1834 aa25.33■■□□□ 1.65
CSNK1E-207ENST00000430335 C21orf2O43822 256 aa25.33■■□□□ 1.65
CSNK1E-207ENST00000430335 BBOX1O75936 387 aa25.33■■□□□ 1.65
CSNK1E-207ENST00000430335 TTLL11Q8NHH1 800 aa25.33■■□□□ 1.65
CSNK1E-207ENST00000430335 USP44Q9H0E7 712 aa25.33■■□□□ 1.65
CSNK1E-207ENST00000430335 CSF1RP07333 972 aa25.32■■□□□ 1.64
CSNK1E-207ENST00000430335 NBPF7P0C2Y1 421 aaPredicted RBP25.32■■□□□ 1.64
CSNK1E-207ENST00000430335 TNNQ9UQP3 1299 aa25.32■■□□□ 1.64
CSNK1E-207ENST00000430335 RTL9Q8NET4 1388 aa25.31■■□□□ 1.64
CSNK1E-207ENST00000430335 ARHGAP27Q6ZUM4 889 aa25.31■■□□□ 1.64
CSNK1E-207ENST00000430335 PPEF1O14829 653 aaPredicted RBP25.3■■□□□ 1.64
CSNK1E-207ENST00000430335 FOXO4P98177 505 aa25.3■■□□□ 1.64
CSNK1E-207ENST00000430335 CC2D2BQ6DHV5 1058 aa25.3■■□□□ 1.64
CSNK1E-207ENST00000430335 TMC4Q7Z404 712 aa25.3■■□□□ 1.64
CSNK1E-207ENST00000430335 ZNF219Q9P2Y4 722 aaPredicted RBP25.3■■□□□ 1.64
CSNK1E-207ENST00000430335 CCDC93Q567U6 631 aa25.29■■□□□ 1.64
CSNK1E-207ENST00000430335 DZIP1LQ8IYY4 767 aaKnown RBP25.29■■□□□ 1.64
CSNK1E-207ENST00000430335 CLUAP1Q96AJ1 413 aa25.29■■□□□ 1.64
CSNK1E-207ENST00000430335 CELF1Q92879 486 aaKnown RBP25.28■■□□□ 1.64
CSNK1E-207ENST00000430335 SUCLG2Q96I99 432 aa25.28■■□□□ 1.64
CSNK1E-207ENST00000430335 SEC31BQ9NQW1 1179 aa25.28■■□□□ 1.64
CSNK1E-207ENST00000430335 ATP6V0A2Q9Y487 856 aa25.28■■□□□ 1.64
CSNK1E-207ENST00000430335 RPS8P62241 208 aaKnown RBP25.27■■□□□ 1.64
CSNK1E-207ENST00000430335 GRIPAP1Q4V328 841 aa25.27■■□□□ 1.64
CSNK1E-207ENST00000430335 EPHA10Q5JZY3 1008 aa25.27■■□□□ 1.64
CSNK1E-207ENST00000430335 FTSJ3Q8IY81 847 aaKnown RBP25.27■■□□□ 1.64
CSNK1E-207ENST00000430335 KAZALD1Q96I82 304 aa25.27■■□□□ 1.64
CSNK1E-207ENST00000430335 CCDC85AQ96PX6 553 aaPredicted RBP25.27■■□□□ 1.64
CSNK1E-207ENST00000430335 GREM2Q9H772 168 aa25.27■■□□□ 1.64
CSNK1E-207ENST00000430335 CACNA1SQ13698 1873 aa25.26■■□□□ 1.63
CSNK1E-207ENST00000430335 MYH3P11055 1940 aa25.26■■□□□ 1.63
CSNK1E-207ENST00000430335 MS4A1P11836 297 aa25.26■■□□□ 1.63
CSNK1E-207ENST00000430335 SP8Q8IXZ3 490 aa25.26■■□□□ 1.63
CSNK1E-207ENST00000430335 RTKN2Q8IZC4 609 aa25.26■■□□□ 1.63
CSNK1E-207ENST00000430335 TMEM57Q8N5G2 664 aa25.26■■□□□ 1.63
CSNK1E-207ENST00000430335 NFKBIEO00221 500 aa25.25■■□□□ 1.63
CSNK1E-207ENST00000430335 LMBR1LQ6UX01 489 aa25.25■■□□□ 1.63
CSNK1E-207ENST00000430335 CDC5LQ99459 802 aaKnown RBP25.25■■□□□ 1.63
CSNK1E-207ENST00000430335 TMX4Q9H1E5 349 aaPredicted RBP25.25■■□□□ 1.63
CSNK1E-207ENST00000430335 HDAC5Q9UQL6 1122 aa25.25■■□□□ 1.63
CSNK1E-207ENST00000430335 LTBP3Q9NS15 1303 aa25.25■■□□□ 1.63
CSNK1E-207ENST00000430335 SNED1Q8TER0 1413 aa25.25■■□□□ 1.63
CSNK1E-207ENST00000430335 UBTFL1P0CB47 393 aaPredicted RBP25.24■■□□□ 1.63
CSNK1E-207ENST00000430335 RLBP1P12271 317 aa25.24■■□□□ 1.63
CSNK1E-207ENST00000430335 FAM161AQ3B820 660 aa25.24■■□□□ 1.63
CSNK1E-207ENST00000430335 RABL6Q3YEC7 729 aaPredicted RBP25.24■■□□□ 1.63
CSNK1E-207ENST00000430335 OLFM4Q6UX06 510 aa25.24■■□□□ 1.63
CSNK1E-207ENST00000430335 GNAI3P08754 354 aa25.23■■□□□ 1.63
CSNK1E-207ENST00000430335 ITGA6P23229 1130 aa25.23■■□□□ 1.63
CSNK1E-207ENST00000430335 ANKRD18AQ8IVF6 992 aa25.23■■□□□ 1.63
CSNK1E-207ENST00000430335 GOLGA6L2Q8N9W4 650 aaPredicted RBP25.23■■□□□ 1.63
CSNK1E-207ENST00000430335 MEIS3Q99687 375 aa25.23■■□□□ 1.63
CSNK1E-207ENST00000430335 BICC1Q9H694 974 aaKnown RBP25.23■■□□□ 1.63
CSNK1E-207ENST00000430335 TAOK3Q9H2K8 898 aa25.22■■□□□ 1.63
CSNK1E-207ENST00000430335 COL4A1P02462 1669 aa25.21■■□□□ 1.63
CSNK1E-207ENST00000430335 ANKRD18BA2A2Z9 1011 aa25.21■■□□□ 1.63
CSNK1E-207ENST00000430335 FKBP4Q02790 459 aaKnown RBP eCLIP25.21■■□□□ 1.63
CSNK1E-207ENST00000430335 RASSF7Q02833 373 aa25.21■■□□□ 1.63
CSNK1E-207ENST00000430335 IFIT5Q13325 482 aaKnown RBP25.21■■□□□ 1.63
CSNK1E-207ENST00000430335 ANKRD44Q8N8A2 993 aa25.21■■□□□ 1.63
CSNK1E-207ENST00000430335 PSMD1Q99460 953 aa25.21■■□□□ 1.63
CSNK1E-207ENST00000430335 FER1L6Q2WGJ9 1857 aa25.21■■□□□ 1.63
CSNK1E-207ENST00000430335 TAF1P21675 1872 aa25.2■■□□□ 1.62
CSNK1E-207ENST00000430335 PLIN1O60240 522 aa25.2■■□□□ 1.62
CSNK1E-207ENST00000430335 SLC51AQ86UW1 340 aa25.2■■□□□ 1.62
CSNK1E-207ENST00000430335 BSDC1Q9NW68 430 aaPredicted RBP25.2■■□□□ 1.62
CSNK1E-207ENST00000430335 CHMP3Q9Y3E7 222 aa25.2■■□□□ 1.62
CSNK1E-207ENST00000430335 LMNB1P20700 586 aa25.19■■□□□ 1.62
CSNK1E-207ENST00000430335 IGHMBP2P38935 993 aaKnown RBP25.19■■□□□ 1.62
CSNK1E-207ENST00000430335 CCDC57Q2TAC2 916 aa25.19■■□□□ 1.62
CSNK1E-207ENST00000430335 ITPRIPQ8IWB1 547 aa25.19■■□□□ 1.62
CSNK1E-207ENST00000430335 PANK1Q8TE04 598 aa25.19■■□□□ 1.62
CSNK1E-207ENST00000430335 CHD4Q14839 1912 aa25.18■■□□□ 1.62
CSNK1E-207ENST00000430335 PRELPP51888 382 aa25.17■■□□□ 1.62
CSNK1E-207ENST00000430335 PDE3AQ14432 1141 aa25.17■■□□□ 1.62
CSNK1E-207ENST00000430335 MPNDQ8N594 471 aa25.17■■□□□ 1.62
CSNK1E-207ENST00000430335 RTFDC1Q9BY42 306 aaPredicted RBP25.17■■□□□ 1.62
CSNK1E-207ENST00000430335 LRRC37AA6NMS7 1700 aa25.17■■□□□ 1.62
CSNK1E-207ENST00000430335 C9orf131Q5VYM1 1079 aa25.16■■□□□ 1.62
CSNK1E-207ENST00000430335 LRRFIP2Q9Y608 721 aaKnown RBP25.16■■□□□ 1.62
CSNK1E-207ENST00000430335 ZBTB7BO15156 539 aaPredicted RBP25.15■■□□□ 1.62
CSNK1E-207ENST00000430335 DPP8Q6V1X1 898 aaPredicted RBP25.15■■□□□ 1.62
CSNK1E-207ENST00000430335 MPHOSPH8Q99549 860 aa25.15■■□□□ 1.62
CSNK1E-207ENST00000430335 PODXL2Q9NZ53 605 aa25.15■■□□□ 1.62
CSNK1E-207ENST00000430335 GNAI2P04899 355 aa25.14■■□□□ 1.62
CSNK1E-207ENST00000430335 MVPQ14764 893 aaKnown RBP25.14■■□□□ 1.62
CSNK1E-207ENST00000430335 SUPT20HQ8NEM7 779 aa25.14■■□□□ 1.62
CSNK1E-207ENST00000430335 RNF181Q9P0P0 153 aa25.14■■□□□ 1.62
CSNK1E-207ENST00000430335 GPSM2P81274 684 aa25.13■■□□□ 1.61
CSNK1E-207ENST00000430335 TAF7LQ5H9L4 462 aa25.13■■□□□ 1.61
CSNK1E-207ENST00000430335 VPS33BQ9H267 617 aa25.13■■□□□ 1.61
CSNK1E-207ENST00000430335 ZNF277Q9NRM2 450 aaPredicted RBP25.13■■□□□ 1.61
CSNK1E-207ENST00000430335 MINPP1Q9UNW1 487 aa25.13■■□□□ 1.61
CSNK1E-207ENST00000430335 NSFL1CQ9UNZ2 370 aaKnown RBP25.13■■□□□ 1.61
CSNK1E-207ENST00000430335 SBF1O95248 1867 aa25.12■■□□□ 1.61
CSNK1E-207ENST00000430335 IARSP41252 1262 aaKnown RBP25.11■■□□□ 1.61
CSNK1E-207ENST00000430335 RRP1P56182 461 aaKnown RBP25.11■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms