RNA–Protein interactions for RNA: ENST00000429896.6

PTCH1-207, Transcript of patched 1, humanhuman

TSL 1 (best) BASIC

Gene PTCH1, Length 6,563 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-207ENST00000429896 GCKRQ14397 625 aa15.34■□□□□ 0.05
PTCH1-207ENST00000429896 CNKSR2Q8WXI2 1034 aa15.34■□□□□ 0.05
PTCH1-207ENST00000429896 ZBTB1Q9Y2K1 713 aa15.34■□□□□ 0.05
PTCH1-207ENST00000429896 HELBQ8NG08 1087 aaPredicted RBP15.34■□□□□ 0.05
PTCH1-207ENST00000429896 CYP46A1Q9Y6A2 500 aa15.34■□□□□ 0.05
PTCH1-207ENST00000429896 TTLL7Q6ZT98 887 aa15.33■□□□□ 0.05
PTCH1-207ENST00000429896 NAPBQ9H115 298 aa15.33■□□□□ 0.05
PTCH1-207ENST00000429896 HEG1Q9ULI3 1381 aa15.33■□□□□ 0.05
PTCH1-207ENST00000429896 UFL1O94874 794 aa15.33■□□□□ 0.05
PTCH1-207ENST00000429896 VSIG10Q8N0Z9 540 aa15.33■□□□□ 0.04
PTCH1-207ENST00000429896 SUPT20HQ8NEM7 779 aa15.33■□□□□ 0.04
PTCH1-207ENST00000429896 IQSEC3Q9UPP2 1182 aaPredicted RBP15.33■□□□□ 0.04
PTCH1-207ENST00000429896 LRRC7Q96NW7 1537 aa15.33■□□□□ 0.04
PTCH1-207ENST00000429896 HDAC1Q13547 482 aaPredicted RBP15.33■□□□□ 0.04
PTCH1-207ENST00000429896 MINDY4BA8MYZ0 360 aa15.33■□□□□ 0.04
PTCH1-207ENST00000429896 MKNK2Q9HBH9 465 aa15.33■□□□□ 0.04
PTCH1-207ENST00000429896 GGA1Q9UJY5 639 aa15.33■□□□□ 0.04
PTCH1-207ENST00000429896 TNNQ9UQP3 1299 aa15.33■□□□□ 0.04
PTCH1-207ENST00000429896 KAT6BQ8WYB5 2073 aa15.32■□□□□ 0.04
PTCH1-207ENST00000429896 TPM3P06753 285 aa15.32■□□□□ 0.04
PTCH1-207ENST00000429896 KDRP35968 1356 aa15.32■□□□□ 0.04
PTCH1-207ENST00000429896 KRT32Q14532 448 aa15.32■□□□□ 0.04
PTCH1-207ENST00000429896 PCMTD1Q96MG8 357 aaPredicted RBP15.32■□□□□ 0.04
PTCH1-207ENST00000429896 F8W031 263 aaPredicted RBP15.32■□□□□ 0.04
PTCH1-207ENST00000429896 CEP85Q6P2H3 762 aa15.32■□□□□ 0.04
PTCH1-207ENST00000429896 DPP8Q6V1X1 898 aaPredicted RBP15.32■□□□□ 0.04
PTCH1-207ENST00000429896 ZNF592Q92610 1267 aa15.32■□□□□ 0.04
PTCH1-207ENST00000429896 TFCP2Q12800 502 aa15.31■□□□□ 0.04
PTCH1-207ENST00000429896 SLC27A3Q5K4L6 730 aa15.31■□□□□ 0.04
PTCH1-207ENST00000429896 C2CD5Q86YS7 1000 aa15.31■□□□□ 0.04
PTCH1-207ENST00000429896 CLEC11AQ9Y240 323 aa15.31■□□□□ 0.04
PTCH1-207ENST00000429896 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.31■□□□□ 0.04
PTCH1-207ENST00000429896 PAXIP1Q6ZW49 1069 aaPredicted RBP15.31■□□□□ 0.04
PTCH1-207ENST00000429896 LMOD1P29536 600 aaPredicted RBP15.31■□□□□ 0.04
PTCH1-207ENST00000429896 C16orf71Q8IYS4 520 aaPredicted RBP15.31■□□□□ 0.04
PTCH1-207ENST00000429896 NEURL1BA8MQ27 555 aa15.31■□□□□ 0.04
PTCH1-207ENST00000429896 NEK4P51957 841 aa15.3■□□□□ 0.04
PTCH1-207ENST00000429896 ANKRD1Q15327 319 aa15.3■□□□□ 0.04
PTCH1-207ENST00000429896 U3KPZ7 1027 aaPredicted RBP15.3■□□□□ 0.04
PTCH1-207ENST00000429896 NUP133Q8WUM0 1156 aa15.3■□□□□ 0.04
PTCH1-207ENST00000429896 ATG3Q9NT62 314 aa15.3■□□□□ 0.04
PTCH1-207ENST00000429896 WDHD1O75717 1129 aaPredicted RBP15.3■□□□□ 0.04
PTCH1-207ENST00000429896 HLA-DOAP06340 250 aa15.3■□□□□ 0.04
PTCH1-207ENST00000429896 RABEP1Q15276 862 aa15.3■□□□□ 0.04
PTCH1-207ENST00000429896 EYA2O00167 538 aa15.29■□□□□ 0.04
PTCH1-207ENST00000429896 CRNKL1Q9BZJ0 848 aaKnown RBP15.29■□□□□ 0.04
PTCH1-207ENST00000429896 ZSCAN21Q9Y5A6 473 aaPredicted RBP15.29■□□□□ 0.04
PTCH1-207ENST00000429896 RLBP1P12271 317 aa15.29■□□□□ 0.04
PTCH1-207ENST00000429896 SUCLG2Q96I99 432 aa15.29■□□□□ 0.04
PTCH1-207ENST00000429896 BCS1LQ9Y276 419 aa15.29■□□□□ 0.04
PTCH1-207ENST00000429896 ZNF444Q8N0Y2 327 aaPredicted RBP15.28■□□□□ 0.04
PTCH1-207ENST00000429896 GPR162Q16538 588 aa15.28■□□□□ 0.04
PTCH1-207ENST00000429896 VPS37CA5D8V6 355 aaPredicted RBP15.28■□□□□ 0.04
PTCH1-207ENST00000429896 BLOC1S2Q6QNY1 142 aa15.28■□□□□ 0.04
PTCH1-207ENST00000429896 PRAMEF22A3QJZ6 481 aa15.28■□□□□ 0.04
PTCH1-207ENST00000429896 CYP7A1P22680 504 aa15.28■□□□□ 0.04
PTCH1-207ENST00000429896 CPDO75976 1380 aa15.28■□□□□ 0.04
PTCH1-207ENST00000429896 MCM2P49736 904 aa15.28■□□□□ 0.04
PTCH1-207ENST00000429896 PUM3Q15397 648 aaKnown RBP15.28■□□□□ 0.04
PTCH1-207ENST00000429896 ZBTB38Q8NAP3 1195 aaPredicted RBP15.28■□□□□ 0.04
PTCH1-207ENST00000429896 CTSWP56202 376 aa15.27■□□□□ 0.04
PTCH1-207ENST00000429896 LARGE2Q8N3Y3 721 aa15.27■□□□□ 0.04
PTCH1-207ENST00000429896 NAA16Q6N069 864 aaPredicted RBP15.27■□□□□ 0.04
PTCH1-207ENST00000429896 RNF41Q9H4P4 317 aaPredicted RBP15.27■□□□□ 0.04
PTCH1-207ENST00000429896 GJA3Q9Y6H8 435 aa15.27■□□□□ 0.04
PTCH1-207ENST00000429896 RPS6KA4O75676 772 aa15.27■□□□□ 0.04
PTCH1-207ENST00000429896 SERPINB2P05120 415 aa15.27■□□□□ 0.03
PTCH1-207ENST00000429896 EIF6P56537 245 aaKnown RBP15.27■□□□□ 0.03
PTCH1-207ENST00000429896 JAKMIP1Q96N16 626 aaKnown RBP15.27■□□□□ 0.03
PTCH1-207ENST00000429896 PCCAP05165 728 aaPredicted RBP15.27■□□□□ 0.03
PTCH1-207ENST00000429896 ZFYP08048 801 aaPredicted RBP15.27■□□□□ 0.03
PTCH1-207ENST00000429896 NUCB1Q02818 461 aa15.27■□□□□ 0.03
PTCH1-207ENST00000429896 EN1Q05925 392 aaPredicted RBP15.27■□□□□ 0.03
PTCH1-207ENST00000429896 ZBTB40Q9NUA8 1239 aa15.27■□□□□ 0.03
PTCH1-207ENST00000429896 KCNQ2O43526 872 aa15.27■□□□□ 0.03
PTCH1-207ENST00000429896 DENND2AQ9ULE3 1009 aa15.27■□□□□ 0.03
PTCH1-207ENST00000429896 CNKSR1Q969H4 720 aa15.26■□□□□ 0.03
PTCH1-207ENST00000429896 ZBTB7BO15156 539 aaPredicted RBP15.26■□□□□ 0.03
PTCH1-207ENST00000429896 IGHDP01880 384 aa15.26■□□□□ 0.03
PTCH1-207ENST00000429896 GIGYF2Q6Y7W6 1299 aaKnown RBP15.26■□□□□ 0.03
PTCH1-207ENST00000429896 TRIM22Q8IYM9 498 aa15.26■□□□□ 0.03
PTCH1-207ENST00000429896 MPNDQ8N594 471 aa15.26■□□□□ 0.03
PTCH1-207ENST00000429896 ATF5Q9Y2D1 282 aaPredicted RBP15.26■□□□□ 0.03
PTCH1-207ENST00000429896 ZNF213O14771 459 aa15.26■□□□□ 0.03
PTCH1-207ENST00000429896 HIBADHP31937 336 aaKnown RBP15.26■□□□□ 0.03
PTCH1-207ENST00000429896 PROSER3Q2NL68 480 aa15.26■□□□□ 0.03
PTCH1-207ENST00000429896 RBM26Q5T8P6 1007 aaKnown RBP15.26■□□□□ 0.03
PTCH1-207ENST00000429896 MROH5Q6ZUA9 1318 aa15.26■□□□□ 0.03
PTCH1-207ENST00000429896 TXNRD1Q16881 649 aa15.26■□□□□ 0.03
PTCH1-207ENST00000429896 TSHZ3Q63HK5 1081 aa15.26■□□□□ 0.03
PTCH1-207ENST00000429896 ITSN1Q15811 1721 aa15.26■□□□□ 0.03
PTCH1-207ENST00000429896 ERVV-1B6SEH8 477 aa15.26■□□□□ 0.03
PTCH1-207ENST00000429896 ZNF594Q96JF6 807 aaPredicted RBP15.26■□□□□ 0.03
PTCH1-207ENST00000429896 PDRG1Q9NUG6 133 aa15.26■□□□□ 0.03
PTCH1-207ENST00000429896 PCDHB15Q9Y5E8 787 aa15.25■□□□□ 0.03
PTCH1-207ENST00000429896 PRPF40BQ6NWY9 871 aaKnown RBP15.25■□□□□ 0.03
PTCH1-207ENST00000429896 CCDC43Q96MW1 224 aaKnown RBP15.25■□□□□ 0.03
PTCH1-207ENST00000429896 LDHBP07195 334 aaKnown RBP15.25■□□□□ 0.03
PTCH1-207ENST00000429896 NBPF7P0C2Y1 421 aaPredicted RBP15.25■□□□□ 0.03
PTCH1-207ENST00000429896 CABP5Q9NP86 173 aa15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms