RNA–Protein interactions for RNA: ENST00000428962.2

THBS3-202, Transcript of thrombospondin 3, humanhuman

TSL 2

Gene THBS3, Length 1,833 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-202ENST00000428962 TOGARAM1Q9Y4F4 1720 aa16.41■□□□□ 0.22
THBS3-202ENST00000428962 RPAP1Q9BWH6 1393 aaPredicted RBP16.41■□□□□ 0.22
THBS3-202ENST00000428962 A0A0D9SFI3 127 aa16.4■□□□□ 0.22
THBS3-202ENST00000428962 FOXO4P98177 505 aa16.4■□□□□ 0.22
THBS3-202ENST00000428962 FOXD4L5Q5VV16 416 aaPredicted RBP16.4■□□□□ 0.22
THBS3-202ENST00000428962 TTLL7Q6ZT98 887 aa16.4■□□□□ 0.22
THBS3-202ENST00000428962 TICAM2Q86XR7 235 aa16.4■□□□□ 0.22
THBS3-202ENST00000428962 FOXD4L4Q8WXT5 416 aaPredicted RBP16.4■□□□□ 0.22
THBS3-202ENST00000428962 ANP32BQ92688 251 aaKnown RBP16.4■□□□□ 0.22
THBS3-202ENST00000428962 TEX13AQ9BXU3 409 aaPredicted RBP16.4■□□□□ 0.22
THBS3-202ENST00000428962 GPR108Q9NPR9 543 aa16.4■□□□□ 0.22
THBS3-202ENST00000428962 SMC3Q9UQE7 1217 aa16.4■□□□□ 0.22
THBS3-202ENST00000428962 CHMP3Q9Y3E7 222 aa16.4■□□□□ 0.22
THBS3-202ENST00000428962 SLC27A2O14975 620 aa16.39■□□□□ 0.21
THBS3-202ENST00000428962 ADAMTS2O95450 1211 aa16.39■□□□□ 0.21
THBS3-202ENST00000428962 A1BGP04217 495 aa16.39■□□□□ 0.21
THBS3-202ENST00000428962 IL15P40933 162 aaPredicted RBP16.39■□□□□ 0.21
THBS3-202ENST00000428962 ANKRD1Q15327 319 aa16.39■□□□□ 0.21
THBS3-202ENST00000428962 ADCK5Q3MIX3 580 aa16.39■□□□□ 0.21
THBS3-202ENST00000428962 GPT2Q8TD30 523 aa16.39■□□□□ 0.21
THBS3-202ENST00000428962 C8orf37Q96NL8 207 aa16.39■□□□□ 0.21
THBS3-202ENST00000428962 HAUS7Q99871 368 aa16.39■□□□□ 0.21
THBS3-202ENST00000428962 ATG3Q9NT62 314 aa16.39■□□□□ 0.21
THBS3-202ENST00000428962 ATP6V1DQ9Y5K8 247 aa16.39■□□□□ 0.21
THBS3-202ENST00000428962 PDIA4P13667 645 aaKnown RBP16.38■□□□□ 0.21
THBS3-202ENST00000428962 VSIG10Q8N0Z9 540 aa16.38■□□□□ 0.21
THBS3-202ENST00000428962 SYAP1Q96A49 352 aaPredicted RBP16.38■□□□□ 0.21
THBS3-202ENST00000428962 AFF2P51816 1311 aa16.38■□□□□ 0.21
THBS3-202ENST00000428962 NASPP49321 788 aaPredicted RBP16.38■□□□□ 0.21
THBS3-202ENST00000428962 KRT32Q14532 448 aa16.38■□□□□ 0.21
THBS3-202ENST00000428962 DBNDD2Q9BQY9 259 aa16.38■□□□□ 0.21
THBS3-202ENST00000428962 ZBTB3Q9H5J0 574 aa16.38■□□□□ 0.21
THBS3-202ENST00000428962 COL14A1Q05707 1796 aaKnown RBP16.37■□□□□ 0.21
THBS3-202ENST00000428962 CIAO1O76071 339 aa16.37■□□□□ 0.21
THBS3-202ENST00000428962 ZSCAN22P10073 491 aaPredicted RBP16.37■□□□□ 0.21
THBS3-202ENST00000428962 TSGA10IPQ3SY00 556 aa16.37■□□□□ 0.21
THBS3-202ENST00000428962 BLOC1S2Q6QNY1 142 aa16.37■□□□□ 0.21
THBS3-202ENST00000428962 NGLY1Q96IV0 654 aa16.37■□□□□ 0.21
THBS3-202ENST00000428962 ALDH8A1Q9H2A2 487 aaPredicted RBP16.37■□□□□ 0.21
THBS3-202ENST00000428962 STX6O43752 255 aa16.36■□□□□ 0.21
THBS3-202ENST00000428962 CPA1P15085 419 aa16.36■□□□□ 0.21
THBS3-202ENST00000428962 KIF6Q6ZMV9 814 aa16.36■□□□□ 0.21
THBS3-202ENST00000428962 DNAJC2Q99543 621 aaKnown RBP16.36■□□□□ 0.21
THBS3-202ENST00000428962 ZNF609O15014 1411 aa16.36■□□□□ 0.21
THBS3-202ENST00000428962 PALLDQ8WX93 1383 aa16.36■□□□□ 0.21
THBS3-202ENST00000428962 CCDC173Q0VFZ6 552 aa16.35■□□□□ 0.21
THBS3-202ENST00000428962 USPL1Q5W0Q7 1092 aa16.35■□□□□ 0.21
THBS3-202ENST00000428962 TMEM87AQ8NBN3 555 aa16.35■□□□□ 0.21
THBS3-202ENST00000428962 ISCA1Q9BUE6 129 aa16.35■□□□□ 0.21
THBS3-202ENST00000428962 U3KPZ7 1027 aaPredicted RBP16.35■□□□□ 0.21
THBS3-202ENST00000428962 PLCH1Q4KWH8 1693 aa16.35■□□□□ 0.21
THBS3-202ENST00000428962 SPEF2Q9C093 1822 aa16.35■□□□□ 0.21
THBS3-202ENST00000428962 EYA2O00167 538 aa16.35■□□□□ 0.21
THBS3-202ENST00000428962 TAF5LO75529 589 aa16.35■□□□□ 0.21
THBS3-202ENST00000428962 ATG9AQ7Z3C6 839 aa16.35■□□□□ 0.21
THBS3-202ENST00000428962 ZNF589Q86UQ0 364 aaPredicted RBP16.35■□□□□ 0.21
THBS3-202ENST00000428962 CCDC83Q8IWF9 413 aa16.35■□□□□ 0.21
THBS3-202ENST00000428962 TRIM44Q96DX7 344 aaPredicted RBP16.35■□□□□ 0.21
THBS3-202ENST00000428962 FBXO3Q9UK99 471 aa16.35■□□□□ 0.21
THBS3-202ENST00000428962 COL22A1Q8NFW1 1626 aaPredicted RBP16.35■□□□□ 0.21
THBS3-202ENST00000428962 SH3TC1Q8TE82 1336 aa16.34■□□□□ 0.21
THBS3-202ENST00000428962 PHF14O94880 888 aa16.34■□□□□ 0.21
THBS3-202ENST00000428962 STARD3NLO95772 234 aa16.34■□□□□ 0.21
THBS3-202ENST00000428962 SYT1P21579 422 aa16.34■□□□□ 0.21
THBS3-202ENST00000428962 RPS6KB1P23443 525 aa16.34■□□□□ 0.21
THBS3-202ENST00000428962 TRIM28Q13263 835 aaKnown RBP16.34■□□□□ 0.21
THBS3-202ENST00000428962 TCIRG1Q13488 830 aa16.34■□□□□ 0.21
THBS3-202ENST00000428962 CSPP1Q1MSJ5 1256 aa16.34■□□□□ 0.21
THBS3-202ENST00000428962 MCMDC2Q4G0Z9 681 aa16.34■□□□□ 0.21
THBS3-202ENST00000428962 KBTBD3Q8NAB2 608 aa16.34■□□□□ 0.21
THBS3-202ENST00000428962 LARGE1O95461 756 aa16.33■□□□□ 0.21
THBS3-202ENST00000428962 F13A1P00488 732 aa16.33■□□□□ 0.21
THBS3-202ENST00000428962 GJB2P29033 226 aa16.33■□□□□ 0.21
THBS3-202ENST00000428962 LRSAM1Q6UWE0 723 aa16.33■□□□□ 0.21
THBS3-202ENST00000428962 EDC3Q96F86 508 aaKnown RBP16.33■□□□□ 0.21
THBS3-202ENST00000428962 DISP2A7MBM2 1401 aa16.33■□□□□ 0.2
THBS3-202ENST00000428962 RXRBP28702 533 aa16.33■□□□□ 0.2
THBS3-202ENST00000428962 CHAMP1Q96JM3 812 aa16.33■□□□□ 0.2
THBS3-202ENST00000428962 NEUROD6Q96NK8 337 aa16.33■□□□□ 0.2
THBS3-202ENST00000428962 LARP6Q9BRS8 491 aaKnown RBP16.33■□□□□ 0.2
THBS3-202ENST00000428962 BTG4Q9NY30 223 aa16.33■□□□□ 0.2
THBS3-202ENST00000428962 TMEM63CQ9P1W3 806 aa16.33■□□□□ 0.2
THBS3-202ENST00000428962 RBM27Q9P2N5 1060 aaKnown RBP16.33■□□□□ 0.2
THBS3-202ENST00000428962 ME3Q16798 604 aa16.32■□□□□ 0.2
THBS3-202ENST00000428962 CCDC57Q2TAC2 916 aa16.32■□□□□ 0.2
THBS3-202ENST00000428962 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.32■□□□□ 0.2
THBS3-202ENST00000428962 HELLSQ9NRZ9 838 aa16.32■□□□□ 0.2
THBS3-202ENST00000428962 PAG1Q9NWQ8 432 aa16.32■□□□□ 0.2
THBS3-202ENST00000428962 ITGB4P16144 1822 aa16.32■□□□□ 0.2
THBS3-202ENST00000428962 PCCAP05165 728 aaPredicted RBP16.31■□□□□ 0.2
THBS3-202ENST00000428962 PDCP20941 246 aa16.31■□□□□ 0.2
THBS3-202ENST00000428962 DDX46Q7L014 1031 aaKnown RBP16.31■□□□□ 0.2
THBS3-202ENST00000428962 FNBP4Q8N3X1 1017 aaPredicted RBP16.31■□□□□ 0.2
THBS3-202ENST00000428962 PIGBQ92521 554 aa16.31■□□□□ 0.2
THBS3-202ENST00000428962 PLA2G12BQ9BX93 195 aa16.31■□□□□ 0.2
THBS3-202ENST00000428962 QTRT2Q9H974 415 aaKnown RBP16.31■□□□□ 0.2
THBS3-202ENST00000428962 TPCN1Q9ULQ1 816 aa16.31■□□□□ 0.2
THBS3-202ENST00000428962 LRRFIP1Q32MZ4 808 aaKnown RBP16.31■□□□□ 0.2
THBS3-202ENST00000428962 HSP90AB3PQ58FF7 597 aa16.31■□□□□ 0.2
THBS3-202ENST00000428962 USP48Q86UV5 1035 aa16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms