RNA–Protein interactions for RNA: ENST00000428848.7

CDH13-202, Transcript of cadherin 13, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CDH13, Length 2,195 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-202ENST00000428848 NECAB1Q8N987 351 aa10.47□□□□□ -0.73
CDH13-202ENST00000428848 FEZ1Q99689 392 aa10.47□□□□□ -0.73
CDH13-202ENST00000428848 TMEM51Q9NW97 253 aa10.47□□□□□ -0.73
CDH13-202ENST00000428848 PYCARDQ9ULZ3 195 aa10.47□□□□□ -0.73
CDH13-202ENST00000428848 MAP3K2Q9Y2U5 619 aa10.47□□□□□ -0.73
CDH13-202ENST00000428848 MRVI1Q9Y6F6 885 aa10.47□□□□□ -0.73
CDH13-202ENST00000428848 ADAMTS7Q9UKP4 1686 aa10.47□□□□□ -0.73
CDH13-202ENST00000428848 BTBD11A6QL63 1104 aa10.46□□□□□ -0.73
CDH13-202ENST00000428848 DTNBO60941 627 aa10.46□□□□□ -0.73
CDH13-202ENST00000428848 GIGYF1O75420 1035 aaPredicted RBP10.46□□□□□ -0.73
CDH13-202ENST00000428848 PSMA5P28066 241 aa10.46□□□□□ -0.73
CDH13-202ENST00000428848 PDCL2Q8N4E4 241 aa10.46□□□□□ -0.73
CDH13-202ENST00000428848 EAF2Q96CJ1 260 aaPredicted RBP10.46□□□□□ -0.73
CDH13-202ENST00000428848 FAM227BQ96M60 508 aa10.46□□□□□ -0.73
CDH13-202ENST00000428848 NPHP3Q7Z494 1330 aa10.46□□□□□ -0.74
CDH13-202ENST00000428848 VPS37CA5D8V6 355 aaPredicted RBP10.46□□□□□ -0.74
CDH13-202ENST00000428848 LIG1P18858 919 aa10.46□□□□□ -0.74
CDH13-202ENST00000428848 PDCP20941 246 aa10.46□□□□□ -0.74
CDH13-202ENST00000428848 PROSER3Q2NL68 480 aa10.46□□□□□ -0.74
CDH13-202ENST00000428848 AACSQ86V21 672 aa10.46□□□□□ -0.74
CDH13-202ENST00000428848 HOMEZQ8IX15 550 aa10.46□□□□□ -0.74
CDH13-202ENST00000428848 ANKRD7Q92527 254 aa10.46□□□□□ -0.74
CDH13-202ENST00000428848 C9orf78Q9NZ63 289 aaPredicted RBP10.46□□□□□ -0.74
CDH13-202ENST00000428848 XIRP1Q702N8 1843 aaKnown RBP10.46□□□□□ -0.74
CDH13-202ENST00000428848 ALS2Q96Q42 1657 aa10.45□□□□□ -0.74
CDH13-202ENST00000428848 RNMTO43148 476 aaKnown RBP10.45□□□□□ -0.74
CDH13-202ENST00000428848 TYRO3Q06418 890 aa10.45□□□□□ -0.74
CDH13-202ENST00000428848 TOB2Q14106 344 aaPredicted RBP10.45□□□□□ -0.74
CDH13-202ENST00000428848 MAP3K11Q16584 847 aa10.45□□□□□ -0.74
CDH13-202ENST00000428848 TPRNQ4KMQ1 711 aa10.45□□□□□ -0.74
CDH13-202ENST00000428848 TEX2Q8IWB9 1127 aa10.45□□□□□ -0.74
CDH13-202ENST00000428848 TSC1Q92574 1164 aa10.45□□□□□ -0.74
CDH13-202ENST00000428848 SUCLG2Q96I99 432 aa10.45□□□□□ -0.74
CDH13-202ENST00000428848 NUP62CLQ9H1M0 184 aa10.45□□□□□ -0.74
CDH13-202ENST00000428848 BCL2L12Q9HB09 334 aa10.45□□□□□ -0.74
CDH13-202ENST00000428848 PXDNQ92626 1479 aa10.45□□□□□ -0.74
CDH13-202ENST00000428848 A0A0D9SFI3 127 aa10.45□□□□□ -0.74
CDH13-202ENST00000428848 RPS6KB1P23443 525 aa10.45□□□□□ -0.74
CDH13-202ENST00000428848 GABPB1Q06547 395 aaPredicted RBP10.45□□□□□ -0.74
CDH13-202ENST00000428848 ANKRD1Q15327 319 aa10.45□□□□□ -0.74
CDH13-202ENST00000428848 CWF19L2Q2TBE0 894 aaKnown RBP10.45□□□□□ -0.74
CDH13-202ENST00000428848 LINS1Q8NG48 757 aa10.45□□□□□ -0.74
CDH13-202ENST00000428848 DDX54Q8TDD1 881 aaKnown RBP10.45□□□□□ -0.74
CDH13-202ENST00000428848 RAPGEF4Q8WZA2 1011 aa10.45□□□□□ -0.74
CDH13-202ENST00000428848 MYH15Q9Y2K3 1946 aa10.44□□□□□ -0.74
CDH13-202ENST00000428848 GOLGA6L6A8MZA4 724 aa10.44□□□□□ -0.74
CDH13-202ENST00000428848 GRM8O00222 908 aa10.44□□□□□ -0.74
CDH13-202ENST00000428848 USPL1Q5W0Q7 1092 aa10.44□□□□□ -0.74
CDH13-202ENST00000428848 SCAND2PQ9GZW5 306 aaPredicted RBP10.44□□□□□ -0.74
CDH13-202ENST00000428848 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.44□□□□□ -0.74
CDH13-202ENST00000428848 HMG20BQ9P0W2 317 aa10.44□□□□□ -0.74
CDH13-202ENST00000428848 TAF6LQ9Y6J9 622 aa10.44□□□□□ -0.74
CDH13-202ENST00000428848 ABCC6O95255 1503 aa10.44□□□□□ -0.74
CDH13-202ENST00000428848 CTIFO43310 598 aaKnown RBP10.43□□□□□ -0.74
CDH13-202ENST00000428848 FAM173BQ6P4H8 233 aa10.43□□□□□ -0.74
CDH13-202ENST00000428848 BLOC1S2Q6QNY1 142 aa10.43□□□□□ -0.74
CDH13-202ENST00000428848 MPRIPQ6WCQ1 1025 aa10.43□□□□□ -0.74
CDH13-202ENST00000428848 BICC1Q9H694 974 aaKnown RBP10.43□□□□□ -0.74
CDH13-202ENST00000428848 DDX19AQ9NUU7 478 aaKnown RBP10.43□□□□□ -0.74
CDH13-202ENST00000428848 DDX58O95786 925 aaKnown RBP10.43□□□□□ -0.74
CDH13-202ENST00000428848 CHAF1AQ13111 956 aaPredicted RBP10.43□□□□□ -0.74
CDH13-202ENST00000428848 G3BP1Q13283 466 aaKnown RBP eCLIP10.43□□□□□ -0.74
CDH13-202ENST00000428848 RNF20Q5VTR2 975 aa10.43□□□□□ -0.74
CDH13-202ENST00000428848 LARP1Q6PKG0 1096 aaKnown RBP10.43□□□□□ -0.74
CDH13-202ENST00000428848 FERMT3Q86UX7 667 aa10.43□□□□□ -0.74
CDH13-202ENST00000428848 PLA2G4DQ86XP0 818 aa10.43□□□□□ -0.74
CDH13-202ENST00000428848 TDRD7Q8NHU6 1098 aaKnown RBP10.43□□□□□ -0.74
CDH13-202ENST00000428848 LEO1Q8WVC0 666 aaPredicted RBP10.43□□□□□ -0.74
CDH13-202ENST00000428848 LRRC59Q96AG4 307 aaKnown RBP10.43□□□□□ -0.74
CDH13-202ENST00000428848 CCDC8Q9H0W5 538 aaPredicted RBP10.43□□□□□ -0.74
CDH13-202ENST00000428848 CLSTN2Q9H4D0 955 aa10.43□□□□□ -0.74
CDH13-202ENST00000428848 CBX8Q9HC52 389 aa10.43□□□□□ -0.74
CDH13-202ENST00000428848 TLR7Q9NYK1 1049 aaKnown RBP10.43□□□□□ -0.74
CDH13-202ENST00000428848 ERBB3P21860 1342 aa10.42□□□□□ -0.74
CDH13-202ENST00000428848 CHRM1P11229 460 aaPredicted RBP10.42□□□□□ -0.74
CDH13-202ENST00000428848 TATP17735 454 aaPredicted RBP10.42□□□□□ -0.74
CDH13-202ENST00000428848 PLCB2Q00722 1185 aa10.42□□□□□ -0.74
CDH13-202ENST00000428848 PDIA6Q15084 440 aa10.42□□□□□ -0.74
CDH13-202ENST00000428848 SYCP1Q15431 976 aa10.42□□□□□ -0.74
CDH13-202ENST00000428848 ARHGAP30Q7Z6I6 1101 aaPredicted RBP10.42□□□□□ -0.74
CDH13-202ENST00000428848 SPC24Q8NBT2 197 aa10.42□□□□□ -0.74
CDH13-202ENST00000428848 DACT1Q9NYF0 836 aa10.42□□□□□ -0.74
CDH13-202ENST00000428848 OGFRQ9NZT2 677 aa10.42□□□□□ -0.74
CDH13-202ENST00000428848 PRAMEF22A3QJZ6 481 aa10.42□□□□□ -0.74
CDH13-202ENST00000428848 RIOK3O14730 519 aaKnown RBP10.42□□□□□ -0.74
CDH13-202ENST00000428848 TAF5LO75529 589 aa10.42□□□□□ -0.74
CDH13-202ENST00000428848 PTGS1P23219 599 aa10.42□□□□□ -0.74
CDH13-202ENST00000428848 KCNJ4P48050 445 aa10.42□□□□□ -0.74
CDH13-202ENST00000428848 ZNF589Q86UQ0 364 aaPredicted RBP10.42□□□□□ -0.74
CDH13-202ENST00000428848 LUZP1Q86V48 1076 aa10.42□□□□□ -0.74
CDH13-202ENST00000428848 PGBD1Q96JS3 809 aa10.42□□□□□ -0.74
CDH13-202ENST00000428848 TNMDQ9H2S6 317 aa10.42□□□□□ -0.74
CDH13-202ENST00000428848 BOLA2Q9H3K6 86 aa10.42□□□□□ -0.74
CDH13-202ENST00000428848 DDX21Q9NR30 783 aaKnown RBP eCLIP10.42□□□□□ -0.74
CDH13-202ENST00000428848 COL15A1P39059 1388 aa10.41□□□□□ -0.74
CDH13-202ENST00000428848 LAMA4Q16363 1823 aa10.41□□□□□ -0.74
CDH13-202ENST00000428848 IGKV5-2P06315 115 aa10.41□□□□□ -0.74
CDH13-202ENST00000428848 SLC20A2Q08357 652 aa10.41□□□□□ -0.74
CDH13-202ENST00000428848 CAMK4Q16566 473 aa10.41□□□□□ -0.74
CDH13-202ENST00000428848 ANO6Q4KMQ2 910 aa10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms