RNA–Protein interactions for RNA: ENST00000428599.6

CTNND1-208, Transcript of catenin delta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTNND1, Length 6,016 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-208ENST00000428599 LRRC59Q96AG4 307 aaKnown RBP10.28□□□□□ -0.76
CTNND1-208ENST00000428599 SCAND2PQ9GZW5 306 aaPredicted RBP10.28□□□□□ -0.76
CTNND1-208ENST00000428599 TSPY2A6NKD2 308 aa10.27□□□□□ -0.76
CTNND1-208ENST00000428599 TMCO5BA8MYB1 307 aa10.27□□□□□ -0.76
CTNND1-208ENST00000428599 CAMK4Q16566 473 aa10.27□□□□□ -0.76
CTNND1-208ENST00000428599 CCDC8Q9H0W5 538 aaPredicted RBP10.27□□□□□ -0.76
CTNND1-208ENST00000428599 CWC25Q9NXE8 425 aaPredicted RBP10.27□□□□□ -0.76
CTNND1-208ENST00000428599 LMTK3Q96Q04 1460 aa10.27□□□□□ -0.76
CTNND1-208ENST00000428599 ANXA1P04083 346 aa10.27□□□□□ -0.77
CTNND1-208ENST00000428599 DNA2P51530 1060 aa10.27□□□□□ -0.77
CTNND1-208ENST00000428599 SPATA24Q86W54 205 aa10.27□□□□□ -0.77
CTNND1-208ENST00000428599 ZNF710Q8N1W2 664 aa10.27□□□□□ -0.77
CTNND1-208ENST00000428599 CCDC82Q8N4S0 544 aa10.27□□□□□ -0.77
CTNND1-208ENST00000428599 CNNM3Q8NE01 707 aa10.27□□□□□ -0.77
CTNND1-208ENST00000428599 CIZ1Q9ULV3 898 aaPredicted RBP10.27□□□□□ -0.77
CTNND1-208ENST00000428599 PIK3R4Q99570 1358 aa10.27□□□□□ -0.77
CTNND1-208ENST00000428599 TRIM27P14373 513 aa10.27□□□□□ -0.77
CTNND1-208ENST00000428599 VAT1LQ9HCJ6 419 aa10.27□□□□□ -0.77
CTNND1-208ENST00000428599 BCCIPQ9P287 314 aaKnown RBP eCLIP10.27□□□□□ -0.771e-6■■■■□ 21.2
CTNND1-208ENST00000428599 PI4KAP2A4QPH2 592 aa10.27□□□□□ -0.77
CTNND1-208ENST00000428599 KIF4AO95239 1232 aa10.27□□□□□ -0.77
CTNND1-208ENST00000428599 EIF4A2Q14240 407 aaKnown RBP10.27□□□□□ -0.77
CTNND1-208ENST00000428599 DDB1Q16531 1140 aa10.27□□□□□ -0.77
CTNND1-208ENST00000428599 PI4KAP1Q8N8J0 262 aa10.27□□□□□ -0.77
CTNND1-208ENST00000428599 PPP1R14CQ8TAE6 165 aa10.27□□□□□ -0.77
CTNND1-208ENST00000428599 IDEP14735 1019 aa10.27□□□□□ -0.77
CTNND1-208ENST00000428599 SPECC1Q5M775 1068 aa10.27□□□□□ -0.77
CTNND1-208ENST00000428599 TBX22Q9Y458 520 aa10.26□□□□□ -0.77
CTNND1-208ENST00000428599 NPATQ14207 1427 aa10.26□□□□□ -0.77
CTNND1-208ENST00000428599 YTHDC2Q9H6S0 1430 aaKnown RBP10.26□□□□□ -0.77
CTNND1-208ENST00000428599 MAST1Q9Y2H9 1570 aa10.26□□□□□ -0.77
CTNND1-208ENST00000428599 CTAGE5O15320 804 aa10.26□□□□□ -0.77
CTNND1-208ENST00000428599 ARL1P40616 181 aaPredicted RBP10.26□□□□□ -0.77
CTNND1-208ENST00000428599 SLC39A6Q13433 755 aa10.26□□□□□ -0.77
CTNND1-208ENST00000428599 C6orf163Q5TEZ5 329 aa10.26□□□□□ -0.77
CTNND1-208ENST00000428599 MPNDQ8N594 471 aa10.26□□□□□ -0.77
CTNND1-208ENST00000428599 TBC1D5Q92609 795 aa10.26□□□□□ -0.77
CTNND1-208ENST00000428599 CRNKL1Q9BZJ0 848 aaKnown RBP10.26□□□□□ -0.77
CTNND1-208ENST00000428599 IFI16Q16666 785 aaKnown RBP10.26□□□□□ -0.77
CTNND1-208ENST00000428599 MICALCLQ6ZW33 695 aa10.26□□□□□ -0.77
CTNND1-208ENST00000428599 UBE3BQ7Z3V4 1068 aa10.26□□□□□ -0.77
CTNND1-208ENST00000428599 TRPM2O94759 1503 aa10.26□□□□□ -0.77
CTNND1-208ENST00000428599 SLU7O95391 586 aaKnown RBP10.26□□□□□ -0.77
CTNND1-208ENST00000428599 CCDC175P0C221 793 aa10.26□□□□□ -0.77
CTNND1-208ENST00000428599 ATP6V1AP38606 617 aa10.26□□□□□ -0.77
CTNND1-208ENST00000428599 PRPF4BQ13523 1007 aaKnown RBP10.26□□□□□ -0.77
CTNND1-208ENST00000428599 OGFOD1Q8N543 542 aa10.26□□□□□ -0.77
CTNND1-208ENST00000428599 TTC16Q8NEE8 873 aa10.26□□□□□ -0.77
CTNND1-208ENST00000428599 PHACTR2O75167 634 aa10.25□□□□□ -0.77
CTNND1-208ENST00000428599 TAF12Q16514 161 aa10.25□□□□□ -0.77
CTNND1-208ENST00000428599 CCDC117Q8IWD4 279 aaPredicted RBP10.25□□□□□ -0.77
CTNND1-208ENST00000428599 PLVAPQ9BX97 442 aa10.25□□□□□ -0.77
CTNND1-208ENST00000428599 FLT4P35916 1363 aa10.25□□□□□ -0.77
CTNND1-208ENST00000428599 IL2RBP14784 551 aa10.25□□□□□ -0.77
CTNND1-208ENST00000428599 POLD1P28340 1107 aa10.25□□□□□ -0.77
CTNND1-208ENST00000428599 AKAP4Q5JQC9 854 aa10.25□□□□□ -0.77
CTNND1-208ENST00000428599 BBXQ8WY36 941 aaPredicted RBP10.25□□□□□ -0.77
CTNND1-208ENST00000428599 IL16Q14005 1332 aa10.25□□□□□ -0.77
CTNND1-208ENST00000428599 RBM10P98175 930 aaKnown RBP10.25□□□□□ -0.77
CTNND1-208ENST00000428599 FERMT3Q86UX7 667 aa10.25□□□□□ -0.77
CTNND1-208ENST00000428599 OTUD6BQ8N6M0 293 aa10.25□□□□□ -0.77
CTNND1-208ENST00000428599 POLKQ9UBT6 870 aa10.25□□□□□ -0.77
CTNND1-208ENST00000428599 NDC80O14777 642 aa10.25□□□□□ -0.77
CTNND1-208ENST00000428599 PTPN14Q15678 1187 aa10.25□□□□□ -0.77
CTNND1-208ENST00000428599 NBPF6Q5VWK0 638 aa10.25□□□□□ -0.77
CTNND1-208ENST00000428599 NBPF5PQ86XG9 351 aaPredicted RBP10.25□□□□□ -0.77
CTNND1-208ENST00000428599 NBPF4Q96M43 638 aa10.25□□□□□ -0.77
CTNND1-208ENST00000428599 TTC12Q9H892 705 aaPredicted RBP10.25□□□□□ -0.77
CTNND1-208ENST00000428599 GRPEL1Q9HAV7 217 aa10.25□□□□□ -0.77
CTNND1-208ENST00000428599 GCP02774 474 aa10.24□□□□□ -0.77
CTNND1-208ENST00000428599 NOP2P46087 812 aaKnown RBP10.24□□□□□ -0.77
CTNND1-208ENST00000428599 HLTFQ14527 1009 aaKnown RBP eCLIP10.24□□□□□ -0.775e-6■□□□□ 9.8
CTNND1-208ENST00000428599 MFSD6Q6ZSS7 791 aa10.24□□□□□ -0.77
CTNND1-208ENST00000428599 ZGPATQ8N5A5 531 aaKnown RBP10.24□□□□□ -0.77
CTNND1-208ENST00000428599 JARID2Q92833 1246 aaPredicted RBP10.24□□□□□ -0.77
CTNND1-208ENST00000428599 PLEKHH1Q9ULM0 1364 aa10.24□□□□□ -0.77
CTNND1-208ENST00000428599 TMEM67Q5HYA8 995 aa10.24□□□□□ -0.77
CTNND1-208ENST00000428599 LDHAL6AQ6ZMR3 332 aa10.24□□□□□ -0.77
CTNND1-208ENST00000428599 ANKRD13DQ6ZTN6 518 aa10.24□□□□□ -0.77
CTNND1-208ENST00000428599 PUS7Q96PZ0 661 aaKnown RBP10.24□□□□□ -0.77
CTNND1-208ENST00000428599 CHPF2Q9P2E5 772 aa10.24□□□□□ -0.77
CTNND1-208ENST00000428599 UBA7P41226 1012 aa10.24□□□□□ -0.77
CTNND1-208ENST00000428599 PDCL2Q8N4E4 241 aa10.24□□□□□ -0.77
CTNND1-208ENST00000428599 BACH2Q9BYV9 841 aa10.24□□□□□ -0.77
CTNND1-208ENST00000428599 KANK3Q6NY19 840 aa10.24□□□□□ -0.77
CTNND1-208ENST00000428599 KRT13P13646 458 aa10.24□□□□□ -0.77
CTNND1-208ENST00000428599 CCDC152Q4G0S7 254 aa10.24□□□□□ -0.77
CTNND1-208ENST00000428599 POTEB2H3BUK9 544 aa10.23□□□□□ -0.77
CTNND1-208ENST00000428599 IARSP41252 1262 aaKnown RBP10.23□□□□□ -0.77
CTNND1-208ENST00000428599 UQCRFS1P1P0C7P4 283 aa10.23□□□□□ -0.77
CTNND1-208ENST00000428599 IMPG2Q9BZV3 1241 aa10.23□□□□□ -0.77
CTNND1-208ENST00000428599 A0A1W2PP64 1363 aa10.23□□□□□ -0.77
CTNND1-208ENST00000428599 UQCRHLA0A096LP55 91 aa10.23□□□□□ -0.77
CTNND1-208ENST00000428599 UQCRHP07919 91 aa10.23□□□□□ -0.77
CTNND1-208ENST00000428599 GUCY1B3Q02153 619 aa10.23□□□□□ -0.77
CTNND1-208ENST00000428599 SPECC1LQ69YQ0 1117 aa10.23□□□□□ -0.77
CTNND1-208ENST00000428599 EXOC1Q9NV70 894 aa10.23□□□□□ -0.77
CTNND1-208ENST00000428599 CPLX3Q8WVH0 158 aa10.23□□□□□ -0.77
CTNND1-208ENST00000428599 TSPY3P0CV98 308 aa10.23□□□□□ -0.77
CTNND1-208ENST00000428599 TSPY8P0CW00 308 aa10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 119.4 ms