RNA–Protein interactions for RNA: ENST00000428534.1

GLI3-202, Transcript of GLI family zinc finger 3, humanhuman

TSL 4

Gene GLI3, Length 583 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GLI3-202ENST00000428534 FRAT1Q92837 279 aaPredicted RBP29.61■■■□□ 2.33
GLI3-202ENST00000428534 ARHGAP27Q6ZUM4 889 aa29.6■■■□□ 2.33
GLI3-202ENST00000428534 C3orf67Q6ZVT6 689 aa29.59■■■□□ 2.33
GLI3-202ENST00000428534 HDAC5Q9UQL6 1122 aa29.59■■■□□ 2.33
GLI3-202ENST00000428534 KIF3CO14782 793 aa29.58■■■□□ 2.33
GLI3-202ENST00000428534 LAMB2P55268 1798 aa29.58■■■□□ 2.33
GLI3-202ENST00000428534 GRAPQ13588 217 aa29.58■■■□□ 2.33
GLI3-202ENST00000428534 GRAPLQ8TC17 118 aaPredicted RBP29.58■■■□□ 2.33
GLI3-202ENST00000428534 DDX60Q8IY21 1712 aaKnown RBP29.57■■■□□ 2.32
GLI3-202ENST00000428534 C21orf2O43822 256 aa29.57■■■□□ 2.32
GLI3-202ENST00000428534 CASP7P55210 303 aa29.57■■■□□ 2.32
GLI3-202ENST00000428534 CTSWP56202 376 aa29.57■■■□□ 2.32
GLI3-202ENST00000428534 JARID2Q92833 1246 aaPredicted RBP29.57■■■□□ 2.32
GLI3-202ENST00000428534 MS4A1P11836 297 aa29.56■■■□□ 2.32
GLI3-202ENST00000428534 CCDC93Q567U6 631 aa29.56■■■□□ 2.32
GLI3-202ENST00000428534 RTKN2Q8IZC4 609 aa29.56■■■□□ 2.32
GLI3-202ENST00000428534 RCAN3Q9UKA8 241 aa29.56■■■□□ 2.32
GLI3-202ENST00000428534 UTYO14607 1347 aa29.55■■■□□ 2.32
GLI3-202ENST00000428534 ABCC4O15439 1325 aa29.55■■■□□ 2.32
GLI3-202ENST00000428534 PPEF1O14829 653 aaPredicted RBP29.55■■■□□ 2.32
GLI3-202ENST00000428534 HSPA6P17066 643 aa29.54■■■□□ 2.32
GLI3-202ENST00000428534 C7orf43Q8WVR3 580 aa29.54■■■□□ 2.32
GLI3-202ENST00000428534 TRIM27P14373 513 aa29.53■■■□□ 2.32
GLI3-202ENST00000428534 INTS3Q68E01 1043 aaKnown RBP29.53■■■□□ 2.32
GLI3-202ENST00000428534 TTLL11Q8NHH1 800 aa29.53■■■□□ 2.32
GLI3-202ENST00000428534 RTL9Q8NET4 1388 aa29.52■■■□□ 2.32
GLI3-202ENST00000428534 CDC5LQ99459 802 aaKnown RBP29.52■■■□□ 2.32
GLI3-202ENST00000428534 ZNF219Q9P2Y4 722 aaPredicted RBP29.52■■■□□ 2.32
GLI3-202ENST00000428534 ATP6V0A2Q9Y487 856 aa29.52■■■□□ 2.32
GLI3-202ENST00000428534 CSF1RP07333 972 aa29.51■■■□□ 2.31
GLI3-202ENST00000428534 RPS8P62241 208 aaKnown RBP29.51■■■□□ 2.31
GLI3-202ENST00000428534 SP8Q8IXZ3 490 aa29.51■■■□□ 2.31
GLI3-202ENST00000428534 FTSJ3Q8IY81 847 aaKnown RBP29.51■■■□□ 2.31
GLI3-202ENST00000428534 GOLGA6L2Q8N9W4 650 aaPredicted RBP29.5■■■□□ 2.31
GLI3-202ENST00000428534 SLX4Q8IY92 1834 aa29.5■■■□□ 2.31
GLI3-202ENST00000428534 LTBP3Q9NS15 1303 aa29.49■■■□□ 2.31
GLI3-202ENST00000428534 USP44Q9H0E7 712 aa29.49■■■□□ 2.31
GLI3-202ENST00000428534 SBF1O95248 1867 aa29.48■■■□□ 2.31
GLI3-202ENST00000428534 NBPF7P0C2Y1 421 aaPredicted RBP29.48■■■□□ 2.31
GLI3-202ENST00000428534 ANKRD18AQ8IVF6 992 aa29.48■■■□□ 2.31
GLI3-202ENST00000428534 DZIP1LQ8IYY4 767 aaKnown RBP29.48■■■□□ 2.31
GLI3-202ENST00000428534 TAOK3Q9H2K8 898 aa29.48■■■□□ 2.31
GLI3-202ENST00000428534 GNAI3P08754 354 aa29.46■■■□□ 2.31
GLI3-202ENST00000428534 UBTFL1P0CB47 393 aaPredicted RBP29.46■■■□□ 2.31
GLI3-202ENST00000428534 FOXO4P98177 505 aa29.46■■■□□ 2.31
GLI3-202ENST00000428534 GREM2Q9H772 168 aa29.46■■■□□ 2.31
GLI3-202ENST00000428534 ANKRD18BA2A2Z9 1011 aa29.45■■■□□ 2.31
GLI3-202ENST00000428534 LMNB1P20700 586 aa29.45■■■□□ 2.31
GLI3-202ENST00000428534 FKBP4Q02790 459 aaKnown RBP eCLIP29.45■■■□□ 2.31
GLI3-202ENST00000428534 C9orf131Q5VYM1 1079 aa29.45■■■□□ 2.31
GLI3-202ENST00000428534 CELF1Q92879 486 aaKnown RBP29.45■■■□□ 2.31
GLI3-202ENST00000428534 CLUAP1Q96AJ1 413 aa29.45■■■□□ 2.31
GLI3-202ENST00000428534 CCDC85AQ96PX6 553 aaPredicted RBP29.45■■■□□ 2.31
GLI3-202ENST00000428534 CACNA1SQ13698 1873 aa29.44■■■□□ 2.3
GLI3-202ENST00000428534 MYH3P11055 1940 aa29.44■■■□□ 2.3
GLI3-202ENST00000428534 IGHMBP2P38935 993 aaKnown RBP29.44■■■□□ 2.3
GLI3-202ENST00000428534 IFIT5Q13325 482 aaKnown RBP29.44■■■□□ 2.3
GLI3-202ENST00000428534 SUPT20HQ8NEM7 779 aa29.44■■■□□ 2.3
GLI3-202ENST00000428534 PSMD1Q99460 953 aa29.44■■■□□ 2.3
GLI3-202ENST00000428534 NMRK2Q9NPI5 230 aa29.44■■■□□ 2.3
GLI3-202ENST00000428534 SEC31BQ9NQW1 1179 aa29.44■■■□□ 2.3
GLI3-202ENST00000428534 NFKBIEO00221 500 aa29.43■■■□□ 2.3
GLI3-202ENST00000428534 ITGA6P23229 1130 aa29.43■■■□□ 2.3
GLI3-202ENST00000428534 CCDC57Q2TAC2 916 aa29.43■■■□□ 2.3
GLI3-202ENST00000428534 LMBR1LQ6UX01 489 aa29.43■■■□□ 2.3
GLI3-202ENST00000428534 SUCLG2Q96I99 432 aa29.43■■■□□ 2.3
GLI3-202ENST00000428534 VPS33BQ9H267 617 aa29.43■■■□□ 2.3
GLI3-202ENST00000428534 CHMP3Q9Y3E7 222 aa29.43■■■□□ 2.3
GLI3-202ENST00000428534 MPNDQ8N594 471 aa29.41■■■□□ 2.3
GLI3-202ENST00000428534 MPHOSPH8Q99549 860 aa29.41■■■□□ 2.3
GLI3-202ENST00000428534 BSDC1Q9NW68 430 aaPredicted RBP29.41■■■□□ 2.3
GLI3-202ENST00000428534 FAM161AQ3B820 660 aa29.4■■■□□ 2.3
GLI3-202ENST00000428534 DPP8Q6V1X1 898 aaPredicted RBP29.4■■■□□ 2.3
GLI3-202ENST00000428534 TMEM57Q8N5G2 664 aa29.4■■■□□ 2.3
GLI3-202ENST00000428534 ZC3H4Q9UPT8 1303 aaKnown RBP29.4■■■□□ 2.3
GLI3-202ENST00000428534 RASSF7Q02833 373 aa29.39■■■□□ 2.3
GLI3-202ENST00000428534 RABL6Q3YEC7 729 aaPredicted RBP29.39■■■□□ 2.3
GLI3-202ENST00000428534 BICC1Q9H694 974 aaKnown RBP29.39■■■□□ 2.3
GLI3-202ENST00000428534 RNF181Q9P0P0 153 aa29.39■■■□□ 2.3
GLI3-202ENST00000428534 FER1L6Q2WGJ9 1857 aa29.38■■■□□ 2.29
GLI3-202ENST00000428534 TOMM70O94826 608 aa29.38■■■□□ 2.29
GLI3-202ENST00000428534 TAF7LQ5H9L4 462 aa29.38■■■□□ 2.29
GLI3-202ENST00000428534 EPHA10Q5JZY3 1008 aa29.38■■■□□ 2.29
GLI3-202ENST00000428534 CHMP4BQ9H444 224 aaKnown RBP29.38■■■□□ 2.29
GLI3-202ENST00000428534 KAZALD1Q96I82 304 aa29.37■■■□□ 2.29
GLI3-202ENST00000428534 RTFDC1Q9BY42 306 aaPredicted RBP29.37■■■□□ 2.29
GLI3-202ENST00000428534 OLFM4Q6UX06 510 aa29.36■■■□□ 2.29
GLI3-202ENST00000428534 ITPRIPQ8IWB1 547 aa29.36■■■□□ 2.29
GLI3-202ENST00000428534 NSFL1CQ9UNZ2 370 aaKnown RBP29.36■■■□□ 2.29
GLI3-202ENST00000428534 MEIS3Q99687 375 aa29.35■■■□□ 2.29
GLI3-202ENST00000428534 PODXL2Q9NZ53 605 aa29.35■■■□□ 2.29
GLI3-202ENST00000428534 TNNQ9UQP3 1299 aa29.35■■■□□ 2.29
GLI3-202ENST00000428534 SNED1Q8TER0 1413 aa29.35■■■□□ 2.29
GLI3-202ENST00000428534 CCDC88AQ3V6T2 1871 aa29.34■■■□□ 2.29
GLI3-202ENST00000428534 IARSP41252 1262 aaKnown RBP29.34■■■□□ 2.29
GLI3-202ENST00000428534 PDE3AQ14432 1141 aa29.34■■■□□ 2.29
GLI3-202ENST00000428534 ANKRD2Q9GZV1 360 aa29.34■■■□□ 2.29
GLI3-202ENST00000428534 GNAI2P04899 355 aa29.33■■■□□ 2.29
GLI3-202ENST00000428534 EYA3Q99504 573 aa29.33■■■□□ 2.29
GLI3-202ENST00000428534 ANKIB1Q9P2G1 1089 aa29.33■■■□□ 2.29
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms