RNA–Protein interactions for RNA: ENST00000428331.6

ATP2C1-204, Transcript of ATPase secretory pathway Ca2+ transporting 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene ATP2C1, Length 4,795 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2C1-204ENST00000428331 CYB5RLQ6IPT4 315 aa12.6□□□□□ -0.39
ATP2C1-204ENST00000428331 ERO1AQ96HE7 468 aa12.6□□□□□ -0.39
ATP2C1-204ENST00000428331 SFPQP23246 707 aaKnown RBP eCLIP12.6□□□□□ -0.39
ATP2C1-204ENST00000428331 EIF4A1P60842 406 aaKnown RBP12.6□□□□□ -0.39
ATP2C1-204ENST00000428331 FSIP1Q8NA03 581 aa12.6□□□□□ -0.39
ATP2C1-204ENST00000428331 AMOTL2Q9Y2J4 779 aa12.6□□□□□ -0.39
ATP2C1-204ENST00000428331 GRM8O00222 908 aa12.6□□□□□ -0.39
ATP2C1-204ENST00000428331 STK38Q15208 465 aa12.6□□□□□ -0.39
ATP2C1-204ENST00000428331 MRFAP1L1Q96HT8 127 aa12.6□□□□□ -0.39
ATP2C1-204ENST00000428331 FMNL2Q96PY5 1086 aa12.6□□□□□ -0.39
ATP2C1-204ENST00000428331 USP31Q70CQ4 1352 aa12.6□□□□□ -0.39
ATP2C1-204ENST00000428331 CDC25BP30305 580 aa12.6□□□□□ -0.39
ATP2C1-204ENST00000428331 OVOS2A0A0J9YW53 1432 aa12.59□□□□□ -0.39
ATP2C1-204ENST00000428331 OVOS2Q6IE36 1432 aa12.59□□□□□ -0.39
ATP2C1-204ENST00000428331 USP42Q9H9J4 1324 aaKnown RBP12.59□□□□□ -0.39
ATP2C1-204ENST00000428331 SNW1Q13573 536 aaKnown RBP12.59□□□□□ -0.39
ATP2C1-204ENST00000428331 LMOD2Q6P5Q4 547 aa12.59□□□□□ -0.39
ATP2C1-204ENST00000428331 SYNE3Q6ZMZ3 975 aa12.59□□□□□ -0.39
ATP2C1-204ENST00000428331 LRRC8AQ8IWT6 810 aa12.59□□□□□ -0.39
ATP2C1-204ENST00000428331 LINS1Q8NG48 757 aa12.59□□□□□ -0.39
ATP2C1-204ENST00000428331 Q6ZUG5 572 aa12.59□□□□□ -0.39
ATP2C1-204ENST00000428331 PLA2G4DQ86XP0 818 aa12.59□□□□□ -0.39
ATP2C1-204ENST00000428331 KDRP35968 1356 aa12.59□□□□□ -0.39
ATP2C1-204ENST00000428331 BMS1Q14692 1282 aaKnown RBP12.59□□□□□ -0.39
ATP2C1-204ENST00000428331 NOL12Q9UGY1 213 aaKnown RBP eCLIP12.59□□□□□ -0.39
ATP2C1-204ENST00000428331 V9GYY5 206 aaPredicted RBP12.59□□□□□ -0.39
ATP2C1-204ENST00000428331 GNL2Q13823 731 aaKnown RBP12.58□□□□□ -0.39
ATP2C1-204ENST00000428331 CCDC9Q9Y3X0 531 aaKnown RBP12.58□□□□□ -0.39
ATP2C1-204ENST00000428331 PXDNLA1KZ92 1463 aa12.58□□□□□ -0.39
ATP2C1-204ENST00000428331 ROBO2Q9HCK4 1378 aa12.58□□□□□ -0.4
ATP2C1-204ENST00000428331 USP16Q9Y5T5 823 aa12.58□□□□□ -0.4
ATP2C1-204ENST00000428331 TCHHQ07283 1943 aa12.58□□□□□ -0.4
ATP2C1-204ENST00000428331 MTX1Q13505 466 aa12.58□□□□□ -0.4
ATP2C1-204ENST00000428331 CWF19L2Q2TBE0 894 aaKnown RBP12.58□□□□□ -0.4
ATP2C1-204ENST00000428331 ATL3Q6DD88 541 aa12.58□□□□□ -0.4
ATP2C1-204ENST00000428331 MPRIPQ6WCQ1 1025 aa12.58□□□□□ -0.4
ATP2C1-204ENST00000428331 CTNNA3Q9UI47 895 aa12.58□□□□□ -0.4
ATP2C1-204ENST00000428331 CPLX1O14810 134 aa12.57□□□□□ -0.4
ATP2C1-204ENST00000428331 JAK2O60674 1132 aa12.57□□□□□ -0.4
ATP2C1-204ENST00000428331 CCDC150Q8NCX0 1101 aa12.57□□□□□ -0.4
ATP2C1-204ENST00000428331 UBXN4Q92575 508 aa12.57□□□□□ -0.4
ATP2C1-204ENST00000428331 GTF3C6Q969F1 213 aa12.57□□□□□ -0.4
ATP2C1-204ENST00000428331 ZNF215Q9UL58 517 aaPredicted RBP12.57□□□□□ -0.4
ATP2C1-204ENST00000428331 MYO5BQ9ULV0 1848 aa12.57□□□□□ -0.4
ATP2C1-204ENST00000428331 TNRQ92752 1358 aa12.57□□□□□ -0.4
ATP2C1-204ENST00000428331 A0A0D9SFI3 127 aa12.57□□□□□ -0.4
ATP2C1-204ENST00000428331 AOPEPQ8N6M6 819 aa12.57□□□□□ -0.4
ATP2C1-204ENST00000428331 EAF2Q96CJ1 260 aaPredicted RBP12.57□□□□□ -0.4
ATP2C1-204ENST00000428331 DDX41Q9UJV9 622 aaKnown RBP12.57□□□□□ -0.4
ATP2C1-204ENST00000428331 TUBB4AP04350 444 aa12.57□□□□□ -0.4
ATP2C1-204ENST00000428331 GORABQ5T7V8 394 aa12.57□□□□□ -0.4
ATP2C1-204ENST00000428331 KCNB2Q92953 911 aa12.57□□□□□ -0.4
ATP2C1-204ENST00000428331 CALCOCO1Q9P1Z2 691 aa12.57□□□□□ -0.4
ATP2C1-204ENST00000428331 FAM160A1Q05DH4 1040 aa12.56□□□□□ -0.4
ATP2C1-204ENST00000428331 AMOTQ4VCS5 1084 aa12.56□□□□□ -0.4
ATP2C1-204ENST00000428331 LLPHQ9BRT6 129 aaKnown RBP12.56□□□□□ -0.4
ATP2C1-204ENST00000428331 TAOK2Q9UL54 1235 aa12.56□□□□□ -0.4
ATP2C1-204ENST00000428331 GPS2Q13227 327 aa12.56□□□□□ -0.4
ATP2C1-204ENST00000428331 DHX16O60231 1041 aaKnown RBP12.56□□□□□ -0.4
ATP2C1-204ENST00000428331 LRRFIP1Q32MZ4 808 aaKnown RBP12.56□□□□□ -0.4
ATP2C1-204ENST00000428331 SARM1Q6SZW1 724 aa12.56□□□□□ -0.4
ATP2C1-204ENST00000428331 TMC6Q7Z403 805 aa12.56□□□□□ -0.4
ATP2C1-204ENST00000428331 NEUROD6Q96NK8 337 aa12.56□□□□□ -0.4
ATP2C1-204ENST00000428331 LGR6Q9HBX8 967 aa12.56□□□□□ -0.4
ATP2C1-204ENST00000428331 ERICH4A6NGS2 130 aa12.55□□□□□ -0.4
ATP2C1-204ENST00000428331 GIGYF1O75420 1035 aaPredicted RBP12.55□□□□□ -0.4
ATP2C1-204ENST00000428331 AKAP4Q5JQC9 854 aa12.55□□□□□ -0.4
ATP2C1-204ENST00000428331 TMCO3Q6UWJ1 677 aa12.55□□□□□ -0.4
ATP2C1-204ENST00000428331 MRPS27Q92552 414 aaKnown RBP12.55□□□□□ -0.4
ATP2C1-204ENST00000428331 LRRC2Q9BYS8 371 aa12.55□□□□□ -0.4
ATP2C1-204ENST00000428331 BICC1Q9H694 974 aaKnown RBP12.55□□□□□ -0.4
ATP2C1-204ENST00000428331 GUCY1B3Q02153 619 aa12.55□□□□□ -0.4
ATP2C1-204ENST00000428331 NAA16Q6N069 864 aaPredicted RBP12.55□□□□□ -0.4
ATP2C1-204ENST00000428331 CCT2P78371 535 aaKnown RBP12.55□□□□□ -0.4
ATP2C1-204ENST00000428331 ELF2Q15723 593 aa12.55□□□□□ -0.4
ATP2C1-204ENST00000428331 PGBD1Q96JS3 809 aa12.55□□□□□ -0.4
ATP2C1-204ENST00000428331 MCMDC2Q4G0Z9 681 aa12.54□□□□□ -0.4
ATP2C1-204ENST00000428331 ALDH8A1Q9H2A2 487 aaPredicted RBP12.54□□□□□ -0.4
ATP2C1-204ENST00000428331 NOL10Q9BSC4 688 aaKnown RBP12.54□□□□□ -0.4
ATP2C1-204ENST00000428331 IMPACTQ9P2X3 320 aa12.54□□□□□ -0.4
ATP2C1-204ENST00000428331 TMEM2Q9UHN6 1383 aa12.54□□□□□ -0.4
ATP2C1-204ENST00000428331 CBFA2T2O43439 604 aa12.54□□□□□ -0.4
ATP2C1-204ENST00000428331 PSME1Q06323 249 aa12.54□□□□□ -0.4
ATP2C1-204ENST00000428331 SLC3A2P08195 630 aaKnown RBP12.54□□□□□ -0.4
ATP2C1-204ENST00000428331 RESTQ13127 1097 aa12.54□□□□□ -0.4
ATP2C1-204ENST00000428331 DHX32Q7L7V1 743 aaKnown RBP12.54□□□□□ -0.4
ATP2C1-204ENST00000428331 SUCLG2Q96I99 432 aa12.54□□□□□ -0.4
ATP2C1-204ENST00000428331 TIGD1Q96MW7 591 aa12.54□□□□□ -0.4
ATP2C1-204ENST00000428331 PTPDC1A2A3K4 754 aa12.53□□□□□ -0.4
ATP2C1-204ENST00000428331 TAF5LO75529 589 aa12.53□□□□□ -0.4
ATP2C1-204ENST00000428331 SERPINC1P01008 464 aa12.53□□□□□ -0.4
ATP2C1-204ENST00000428331 TPM1P09493 284 aa12.53□□□□□ -0.4
ATP2C1-204ENST00000428331 TOB2Q14106 344 aaPredicted RBP12.53□□□□□ -0.4
ATP2C1-204ENST00000428331 NAA30Q147X3 362 aaPredicted RBP12.53□□□□□ -0.4
ATP2C1-204ENST00000428331 CCDC144BQ3MJ40 725 aa12.53□□□□□ -0.4
ATP2C1-204ENST00000428331 CREBRFQ8IUR6 639 aa12.53□□□□□ -0.4
ATP2C1-204ENST00000428331 CCDC144CPQ8IYA2 1237 aa12.53□□□□□ -0.4
ATP2C1-204ENST00000428331 CCAR2Q8N163 923 aaKnown RBP12.53□□□□□ -0.4
ATP2C1-204ENST00000428331 MORC2Q9Y6X9 1032 aaPredicted RBP12.53□□□□□ -0.4
ATP2C1-204ENST00000428331 CPLX2Q6PUV4 134 aaKnown RBP12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms